FC931496

Overview
NameFC931496
Unique NameFC931496
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NIA_PETHY (Nitrate reductase [NADH] OS=Petunia hybrida GN=NIA PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.938e-16
Identity = 58/163 (35.58%), Postives = 85/163 (52.15%), Query Frame = 1
Query:  250 IALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK-LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEG---------KMSQHFASLKPGDVVEVKGPIEKLRYSPN----------MKKHIGMIAGGTGITPMLQVIEAILKN 678
            +AL P + I  KL D   +SH+   FRF+     + LGL V   I   A +      + K  +R YTP S  +  G+F+L++K+Y +G         +MSQ+  SL  G  V+VKGP+  + Y               K + M+AGGTGITP+ QV++AILK+
Sbjct:  647 VALIPREKIPCKLVDKKSISHDVRKFRFALPSEDQVLGLPVGKHIFLCAII------DDKLCMRAYTPTSTVDEVGYFELVVKIYFKGIVPKFPNGGQMSQYLDSLPLGAFVDVKGPLGHIEYQGRGNFLVHGKRKFAKKLAMLAGGTGITPVYQVMQAILKD 803          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NIA_BEABA (Nitrate reductase [NADPH] OS=Beauveria bassiana GN=NIA PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.938e-16
Identity = 55/160 (34.38%), Postives = 85/160 (53.12%), Query Frame = 1
Query:  250 IALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK-LGLDVASCILTRA--PLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVY------PEGKMSQHFASLKPGDVVEVKGPIEKLRY-----------SPNMKKHIGMIAGGTGITPMLQVIEAI 669
            + L P  W    L+    VS +S +F F  D +A+ +GL     +L R   P  ++A      V+R YTP+S+T AKG  D+LIK+Y      P GKM+Q   S+  G  V++KGP+ K  Y           S ++++ + MI  G+G+TP+ QV+ A+
Sbjct:  633 VFLQPKYWSKAILETKTDVSSDSKIFSFRLDHAAQSIGLPTGQHLLVRLRDPATREA------VIRAYTPLSETHAKGQLDILIKIYRDVPGQPGGKMTQALDSIPLGHFVDIKGPVGKFEYLGKGHCTVSGTSRHVRRFV-MICAGSGVTPIFQVLRAV 785          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NIA2_TOBAC (Nitrate reductase [NADH] 2 OS=Nicotiana tabacum GN=NIA2 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.167e-15
Identity = 57/163 (34.97%), Postives = 85/163 (52.15%), Query Frame = 1
Query:  250 IALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK-LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEG---------KMSQHFASLKPGDVVEVKGPIEKLRYS----------PNMKKHIGMIAGGTGITPMLQVIEAILKN 678
            +AL P + I  KL D   +SH+   FRF+     + LGL V   I   A +      + K  +R YTP S  +  G+F+L++K+Y +G         +MSQ+  S+  G  ++VKGP+  + Y               K + MIAGGTGITP+ QV++AILK+
Sbjct:  642 VALIPREKIPCKLIDKQSISHDVRKFRFALPSEDQVLGLPVGKHIFLCAVI------DDKLCMRAYTPTSTIDEVGYFELVVKIYFKGIHPKFPNGGQMSQYLDSMPLGSFLDVKGPLGHIEYQGKGNFLVHGKQKFAKKLAMIAGGTGITPVYQVMQAILKD 798          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NIA_SOLLC (Nitrate reductase [NADH] OS=Solanum lycopersicum GN=NIA PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.525e-15
Identity = 57/163 (34.97%), Postives = 84/163 (51.53%), Query Frame = 1
Query:  250 IALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK-LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEG---------KMSQHFASLKPGDVVEVKGPIEKLRYS----------PNMKKHIGMIAGGTGITPMLQVIEAILKN 678
            +AL P + I  KL D   +SH+   F+F+     + LGL V   I   A +      + K  +R YTP S  +  G F+L++K+Y +G         +MSQH  SL  G  ++VKGP+  + Y               K + MIAGGTGITP+ QV+++ILK+
Sbjct:  649 VALIPREKIPCKLVDKQSISHDVRKFKFALPSEDQVLGLPVGKHIFLCATV------DDKLCMRAYTPTSTVDEVGFFELVVKIYFKGVHPKFPNGGQMSQHLDSLPIGAFLDVKGPLGHIEYQGKGNFLVHGKQKFAKKLAMIAGGTGITPVYQVMQSILKD 805          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NIA2_ARATH (Nitrate reductase [NADH] 2 OS=Arabidopsis thaliana GN=NIA2 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.991e-15
Identity = 54/161 (33.54%), Postives = 80/161 (49.69%), Query Frame = 1
Query:  256 LNPDKWIGFKLQDTARVSHNSHLFRFSFD-PSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVY---------PEGKMSQHFASLKPGDVVEVKGPIEKLRY----------SPNMKKHIGMIAGGTGITPMLQVIEAILKN 678
            +NP   +  +L +   +SH+   FRF+       LGL V   I   A +      N K  +R YTP S  +  G+F+L++K+Y           G MSQ+  SL  G  +E+KGP+  + Y           P     + M+AGGTGITP+ Q+I+AILK+
Sbjct:  657 VNPRAKVPVQLVEKTSISHDVRKFRFALPVEDMVLGLPVGKHIFLCATI------NDKLCLRAYTPSSTVDVVGYFELVVKIYFGGVHPRFPNGGLMSQYLDSLPIGSTLEIKGPLGHVEYLGKGSFTVHGKPKFADKLAMLAGGTGITPVYQIIQAILKD 811          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NIA2_HORVU (Nitrate reductase [NADH] (Fragment) OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.436e-15
Identity = 65/184 (35.33%), Postives = 96/184 (52.17%), Query Frame = 1
Query:  205 NLVHLDQINEET---GPKIALN-PDKWIGFKLQDTARVSHNSHLFRFSFDPSAK-LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVY-----PE----GKMSQHFASLKPGDV-VEVKGPIEKLRYS----------PNMKKHIGMIAGGTGITPMLQVIEAILKNQ 681
            +L HL  I E T   G  IAL+ P + +  +L D   +SH+  LFRF+   S + LGL V   I   A +      + K  +R YTP S  +  G F+LL+KVY     P+    G M+Q+  SL+ G   ++VKGP+  + Y+              + + MI G +GITPM QVI+A+L++Q
Sbjct:  627 SLSHLAPIREATKVAGAPIALSSPREKVPCRLVDKKELSHDVRLFRFALPSSDQVLGLPVGKHIFVCATI------DGKLCMRAYTPTSMVDEIGQFELLVKVYFRDEHPKFPNGGLMTQYLESLQVGSSSIDVKGPLGHVEYTGRGNFVINGKQRRARRLAMICGSSGITPMYQVIQAVLRDQ 804          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NIA1_TOBAC (Nitrate reductase [NADH] 1 OS=Nicotiana tabacum GN=NIA1 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.794e-15
Identity = 57/163 (34.97%), Postives = 85/163 (52.15%), Query Frame = 1
Query:  250 IALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK-LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEG---------KMSQHFASLKPGDVVEVKGPIEKLRYS----------PNMKKHIGMIAGGTGITPMLQVIEAILKN 678
            +AL P + I  KL D   +S +   FRF+     + LGL V   I   A +      + K  +R YTP S  +  G+F+L++K+Y +G         +MSQ+  SL+ G  ++VKGP+  + Y               K + MIAGGTGITP+ QV++AILK+
Sbjct:  642 VALIPREKIPCKLIDKQSISPDVRKFRFALPSEDQVLGLPVGKHIFLCAVI------DDKLCMRAYTPTSTIDEVGYFELVVKIYFKGIHPKFPNGGQMSQYLDSLQLGSFLDVKGPLGHIEYQGKGNFLVHGKQKFAKKLAMIAGGTGITPVYQVMQAILKD 798          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: MCR1B_VANPO (NADH-cytochrome b5 reductase 2-B OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=MCR1B PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.794e-15
Identity = 50/164 (30.49%), Postives = 78/164 (47.56%), Query Frame = 1
Query:  190 YFSSPNLVHLDQINEETGPKIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAKL-GLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAILKN 678
            YFS+ + +  + ++ +T          W+   L     +SH++  F F       + G+   S +L R        G     +RPYTP+S  E +G  + +IK  P G MS H  SLKP D V   GPI K  +  N    + ++  G+GITP+ Q++ +IL N
Sbjct:   28 YFSTGSRLANEALHNKTFKGFKGPASTWVDLPLVKFEDLSHDTRKFTFKLPNDDDVSGISPLSFLLARPHGTWSLRG-----IRPYTPVSLPETQGVIEFVIKHVPNGGMSSHMFSLKPNDTVSFTGPIVKYEWKQNKFDSVTLLGAGSGITPLYQLMGSILSN 186          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NIA_LEPMC (Nitrate reductase [NADPH] OS=Leptosphaeria maculans GN=NIAD PE=3 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.427e-13
Identity = 53/170 (31.18%), Postives = 87/170 (51.18%), Query Frame = 1
Query:  256 LNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK-LGLDVASCILTRA--PLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPE------GKMSQHFASLKPGDVVEVKGPIEKLRY----------SPNMKKHIGMIAGGTGITPMLQVIEAILKNQMTHSGVTAV 708
            L+   W    L    +VS ++ +FRF  D +++ LGL     ++ R   P+ ++A      ++R YTPIS    +G  D+LIK+Y +      GKM++   S+  G  V++KGPI K  Y          +    + + MI GG+GITP+ QV+ AIL++    +  T +
Sbjct:  638 LDSRTWSKALLSSKTKVSWDTRIFRFKLDHASQTLGLPTGQHLMIRLRDPVTREA------IIRSYTPISQISEQGFCDVLIKIYADAPGREGGKMTKALDSIPCGHWVDMKGPIGKFEYLGKGVCSINGNERRVRSMKMICGGSGITPIYQVLRAILQDSADSTHCTVL 801          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NIA_CICIN (Nitrate reductase [NADH] OS=Cichorium intybus GN=NIA PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.179e-13
Identity = 51/152 (33.55%), Postives = 73/152 (48.03%), Query Frame = 1
Query:  283 KLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPE---------GKMSQHFASLKPGDVVEVKGPIEKLRY----------SPNMKKHIGMIAGGTGITPMLQVIEAILKN 678
            KL     VSH+  LFRF+   P   LGL V   +   A +      + K  +R YTP S  +  G+F+LL+K+Y +         G MSQH  S++ G  +E+KGP+  + Y               + + M AGGTGITP L    + LK+
Sbjct:  669 KLISKTSVSHDVRLFRFALPSPDQVLGLPVGKHVFVCATI------DDKLCMRAYTPTSTIDEVGYFELLVKIYFKGVEPKFPNGGLMSQHLESMELGSSIEIKGPLGHIEYMGRGTFSVHGKQKFARKLAMFAGGTGITPDLSSDASYLKD 814          
The following BLAST results are available for this feature:
BLAST of FC931496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
NIA_PETHY8.938e-1635.58Nitrate reductase [NADH] OS=Petunia hybrida GN=NIA... [more]
NIA_BEABA8.938e-1634.38Nitrate reductase [NADPH] OS=Beauveria bassiana GN... [more]
NIA2_TOBAC1.167e-1534.97Nitrate reductase [NADH] 2 OS=Nicotiana tabacum GN... [more]
NIA_SOLLC1.525e-1534.97Nitrate reductase [NADH] OS=Solanum lycopersicum G... [more]
NIA2_ARATH1.991e-1533.54Nitrate reductase [NADH] 2 OS=Arabidopsis thaliana... [more]
NIA2_HORVU4.436e-1535.33Nitrate reductase [NADH] (Fragment) OS=Hordeum vul... [more]
NIA1_TOBAC5.794e-1534.97Nitrate reductase [NADH] 1 OS=Nicotiana tabacum GN... [more]
MCR1B_VANPO5.794e-1530.49NADH-cytochrome b5 reductase 2-B OS=Vanderwaltozym... [more]
NIA_LEPMC1.427e-1331.18Nitrate reductase [NADPH] OS=Leptosphaeria maculan... [more]
NIA_CICIN3.179e-1333.55Nitrate reductase [NADH] OS=Cichorium intybus GN=N... [more]

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Properties
Property NameValue
Genbank descriptionC34105G03EF PostHarvP1 Citrus clementina cDNA clone C34105G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931496 ID=FC931496; Name=FC931496; organism=Citrus clementina; type=EST; length=710bp
GACTTTTCTTTGCTTTGCTTCTCTCTCCAACATTAGAAAATGGCTACGAC
CTTCTTCAGAAGACTGGCTAAAGCTACTCCAATTGCATTCAACGAGGCAT
TTGGAGGGCAACCCAAGTCCGATTTCAACAAATTTCGATTTCCCTTTGGA
GCAATCGCTGCTGTTGCTGGTGGAGTCTCCTATTACTGTTACTTTTCATC
CCCAAATTTGGTTCATCTAGATCAAATCAATGAAGAGACGGGTCCAAAAA
TTGCTCTCAATCCGGACAAGTGGATTGGATTTAAGTTGCAAGACACTGCA
AGGGTAAGCCACAATAGTCATTTGTTCAGGTTTTCATTTGATCCATCTGC
CAAGTTGGGTTTGGATGTTGCTTCATGCATCCTTACAAGGGCTCCATTAG
GACAAGATGCTGAAGGAAATACAAAATATGTTGTACGGCCGTATACTCCT
ATATCAGATACAGAAGCTAAGGGACACTTTGACTTGTTAATTAAGGTTTA
TCCTGAGGGTAAAATGAGTCAGCATTTTGCTAGCTTAAAACCAGGGGATG
TAGTTGAAGTGAAAGGACCCATTGAAAAGCTCCGATACTCTCCCAATATG
AAGAAACACATCGGCATGATAGCTGGTGGCACAGGTATAACTCCTATGCT
TCAGGTAATTGAGGCTATACTGAAGAATCAGATGACACACTCAGGTGTCA
CTGCTGTATG
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