FC931496

Overview
NameFC931496
Unique NameFC931496
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: MCR1_NEUCR (NADH-cytochrome b5 reductase 2 OS=Neurospora crassa GN=mcr-1 PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.125e-26
Identity = 80/216 (37.04%), Postives = 113/216 (52.31%), Query Frame = 1
Query:   97 AFGGQPKSDFNKFRFPFGAIAAVAGGVSYYCYFSSPNLVH-----LDQINEETGP----KIALNPDK-WIGFKLQDTARVSHNSHLFRFSFDPSAKL-GLDVASCILTR-APLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAILKNQMTHSGVTAV 708
            ++  +P    +      GA A    G   Y +FS           + Q+ E+  P    K  +  D+ W+  KL++   V+HN+   RF       + GL VAS ILT+  P+  DAE   K V+RPYTPISD  A+G+ DLL+K Y  G MS +   + PG  +++KGP+ K  +  N  KHI ++AGGTGITPM Q+I AI  N    + VT V
Sbjct:   27 SYATEPSKGGSSSTILLGAAAVGLAGAGAY-FFSGAGAAKKAEASVKQVTEKITPGEIKKAFVGGDQGWLSLKLEEVELVNHNTKRLRFRLPEDDMVSGLHVASAILTKFKPI--DAE---KAVLRPYTPISDESAQGYIDLLVKKYEGGPMSTYLHDMAPGQRLDIKGPLPKYPWEANKHKHIALVAGGTGITPMYQLIRAIFNNPDDKTKVTLV 236          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: MCR1_ASPOR (NADH-cytochrome b5 reductase 2 OS=Aspergillus oryzae GN=mcr1 PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.125e-26
Identity = 64/148 (43.24%), Postives = 89/148 (60.14%), Query Frame = 1
Query:  271 WIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTR-APLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAILKNQMTHSGVTAV 708
            W+  KL +   +SHN+   RF F D  A  G+ +AS +LT+  P+G +     K V+RPYTP SD +  G+ DL++KVYP G MS+H  S+     +  KGP+ K ++  N  +HI +IAGGTGITPM Q+I  I KN    + VT V
Sbjct:   74 WVDLKLSEIEVLSHNTKRLRFEFEDKEAVSGVTIASALLTKFKPVGAE-----KAVLRPYTPTSDEDQPGYLDLVVKVYPNGPMSEHLHSMNVDQRLSFKGPLPKYQWETNKHEHIALIAGGTGITPMYQLIRQIFKNPDDKTKVTLV 216          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: MCR1_ASPTN (NADH-cytochrome b5 reductase 2 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=mcr1 PE=3 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.920e-26
Identity = 73/180 (40.56%), Postives = 97/180 (53.89%), Query Frame = 1
Query:  172 GVSYYCYFSSPNLVHLDQINEETGPKIALNPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAILKNQMTHSGVTAV 708
            GV  Y Y S+      ++    TG         W+  KL +   ++HN+  FRF F D  A  GL+VAS +LT+       EG  K V+RPYTP+SD    G  DL++KVYP G MS+H  S+     +E KGP+ K  +  N  +HI +IAGGTGITPM Q+   I KN    + VT V
Sbjct:   43 GVGLYRYNSATAEAPAERAKVFTG-----GDQGWVDLKLSEIEVLNHNTKRFRFEFEDKEAVSGLNVASALLTKFK----PEGG-KAVLRPYTPVSDESQPGFLDLVVKVYPNGPMSEHLHSMNVDQRLEFKGPLPKYPWEANKHQHICLIAGGTGITPMYQLARHIFKNPEDKTKVTLV 212          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: MCR1_PICGU (NADH-cytochrome b5 reductase 2 OS=Pichia guilliermondii GN=MCR1 PE=3 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 3.275e-26
Identity = 65/139 (46.76%), Postives = 84/139 (60.43%), Query Frame = 1
Query:  265 DKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAILKN 678
            D+WI  KL+ +  VS N+  F F    P    GL  ASC++T+      A+GN   V+RPYTP+SD + KG  D +IK Y  GKMS HF  LK GD V  KGPI K ++ PN  + I +I GGTGITP+ Q++  I KN
Sbjct:   45 DEWIDLKLKKSWDVSSNTRHFVFELKSPEDVSGLVTASCLMTKFVT---AKGNN--VIRPYTPVSDVDQKGTIDFVIKKYDGGKMSTHFHGLKEGDTVSFKGPIVKWKWEPNQFQSIALIGGGTGITPLYQLLHEITKN 178          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NCB5R_CRYNE (NADH-cytochrome b5 reductase 1 OS=Cryptococcus neoformans GN=CBR1 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.528e-26
Identity = 63/141 (44.68%), Postives = 88/141 (62.41%), Query Frame = 1
Query:  256 LNPDKWIGFKLQDTARVSHNSHLFRFSFD-PSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAILK 675
            L+P +W  FKL D   +SHN+ L+RF+    S  LGL +   I   A +      N K VVR YTP +  + KGHFDL++K Y +G +S++ + L  G  ++VKGP  K  Y+PNM  H+ MIAGGTGITPM Q+I++ +K
Sbjct:   41 LDPVEWRSFKLVDKDHLSHNTALYRFALPRASDSLGLPIGQHISVAAEI------NGKQVVRSYTPTTLDDDKGHFDLVVKTYEKGNISRYLSLLTIGQEIKVKGPKGKFVYTPNMAPHLVMIAGGTGITPMYQIIKSSIK 175          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: MCR1_EMENI (NADH-cytochrome b5 reductase 2 OS=Emericella nidulans GN=mcr1 PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.244e-25
Identity = 63/157 (40.13%), Postives = 89/157 (56.69%), Query Frame = 1
Query:  244 PKIALNPDK-WIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAILKNQMTHSGVTAV 708
            PK+    D+ W+  KL D   +SHN+   RF F D  A  GL +AS +LT+          +K V+RPYTP SD +  G+ +L++K YP G MS+H  ++     ++ KGP+ K  +  N  KHI ++AGGTGITPM Q+   I KN    + VT V
Sbjct:   63 PKVFTGGDQGWVNLKLSDIEILSHNTKRLRFEFPDKEAVSGLHIASALLTK----YSPPDGSKPVIRPYTPTSDEDQPGYLELVVKRYPNGPMSEHLHNMNVDQRLDFKGPLPKYPWEANKHKHICLVAGGTGITPMYQLAREIFKNPEDKTKVTLV 215          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: MCR1A_VANPO (NADH-cytochrome b5 reductase 2-A OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=MCR1A PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.244e-25
Identity = 62/147 (42.18%), Postives = 87/147 (59.18%), Query Frame = 1
Query:  247 KIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAKL-GLDVASCILTR--APLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAILKN 678
            K+ +  + WI   +     +SH++  F F +     + GL VAS +LT+   P G +       V+RPYTP+SD + KG  DL+IK YP+GKM+ H  SLK  D +  KGPI K ++ PN  + I +I GGTGITP+ Q+I AI KN
Sbjct:   41 KVFIGDNNWIDLPISRIEEISHDTKRFTFKYPSQDSVSGLVVASALLTKFVTPKGSN-------VIRPYTPVSDVDEKGSLDLVIKHYPDGKMTNHIFSLKVNDTLSFKGPIPKWKWVPNSFESITLIGGGTGITPLYQLIHAITKN 180          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: MCR1_CANAL (NADH-cytochrome b5 reductase 2 OS=Candida albicans GN=MCR1 PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.625e-25
Identity = 72/196 (36.73%), Postives = 105/196 (53.57%), Query Frame = 1
Query:  130 KFRFPFGAIAAVAGGVSYYCYFSSPNLVHLDQINEETGPKIALNPDKWIGFKLQDTARVSHNS-HLFRFSFDPSAKLGLDVASCILTR--APLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAILKNQMTHSGVTAV 708
            KF  PF    A++ G++    +S+ N    + I  ETG K   + ++W+  KL  +  ++HN+ HL     D +   GL  ASC+LT+   P G +       V+RPYTP+SD    G  D +IK Y  GKMS H   LK G+ +  KGPI K ++ PN  K I +I GGTGITP+ Q++  I  N   ++ V  +
Sbjct:   13 KFLVPFAGATALSIGLALQ--YSTSN----NYIANETG-KTFTDSNEWVDLKLSKSIDLTHNTKHLVFKLKDENDVSGLITASCLLTKFVTPKGNN-------VIRPYTPVSDVNQSGEIDFVIKKYDGGKMSSHIFDLKEGETLSFKGPIVKWKWEPNQFKSIALIGGGTGITPLYQLLHQITSNPKDNTKVNLI 194          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: MCR1_DEBHA (NADH-cytochrome b5 reductase 2 OS=Debaryomyces hansenii GN=MCR1 PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.123e-25
Identity = 70/177 (39.55%), Postives = 96/177 (54.24%), Query Frame = 1
Query:  157 AAVAGGVSYYCYFSSPNLVHLDQINEETGPKIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAKL-GLDVASCILTR--APLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAILKN 678
            AA  G V     +S+ ++++      ETG     N D+WI  KL  +   +HN+  F F       + GL  ASC+LT+   P G +       V+RPYTPISD + KG  + +IK Y  GKMS H   LKP D +  KGP+ K ++ PN  K I +I GGTGITP+ Q++  I KN
Sbjct:   21 AAAVGSVGIAYQYSTSSIMN------ETGKTFTGN-DEWIDLKLAKSWDTTHNTKHFVFELANQDDVSGLINASCLLTKFVTPKGNN-------VIRPYTPISDVDGKGSIEFVIKKYDGGKMSSHIHDLKPNDTLAFKGPVVKWKWEPNQYKSIALIGGGTGITPLYQLMHEITKN 183          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: MCR1_BOTFB (NADH-cytochrome b5 reductase 2 OS=Botryotinia fuckeliana (strain B05.10) GN=mcr1 PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.123e-25
Identity = 75/209 (35.89%), Postives = 102/209 (48.80%), Query Frame = 1
Query:  145 FGAIAAVAGGVSYYCYFSSPNLVHLDQI--NEETGPKIALNPDK------------------WIGFKLQDTARVSHNSHLFRFSFDPSAKL-GLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAILKNQMTHSGVTAV 708
            +  +AA AG  +YY      N   +     + E   K A+   K                  +I  KL     ++HN+  FRF    S ++ GL VAS +LT+   G + +   K  +RPYTP SD   +G  DLL+K YP G MS+H   + PG  ++ KGPI K  +S N   HI +IAGGTGITPM Q+  AI  N    + VT V
Sbjct:   35 YAGLAAAAGAGAYYFLNQGDNAAKVKDAAKDAEAKAKEAVGQGKSKVEGAVGKAAFTGGDQGFISLKLDSVENINHNTKKFRFELPESDQVSGLQVASALLTKFK-GPEMQ---KPAIRPYTPTSDESEQGFIDLLVKKYPNGVMSEHMHDMVPGQRLDFKGPIPKYPWSANKHDHIALIAGGTGITPMYQLARAIFNNPADKTKVTLV 239          
The following BLAST results are available for this feature:
BLAST of FC931496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
MCR1_NEUCR1.125e-2637.04NADH-cytochrome b5 reductase 2 OS=Neurospora crass... [more]
MCR1_ASPOR1.125e-2643.24NADH-cytochrome b5 reductase 2 OS=Aspergillus oryz... [more]
MCR1_ASPTN1.920e-2640.56NADH-cytochrome b5 reductase 2 OS=Aspergillus terr... [more]
MCR1_PICGU3.275e-2646.76NADH-cytochrome b5 reductase 2 OS=Pichia guillierm... [more]
NCB5R_CRYNE9.528e-2644.68NADH-cytochrome b5 reductase 1 OS=Cryptococcus neo... [more]
MCR1_EMENI1.244e-2540.13NADH-cytochrome b5 reductase 2 OS=Emericella nidul... [more]
MCR1A_VANPO1.244e-2542.18NADH-cytochrome b5 reductase 2-A OS=Vanderwaltozym... [more]
MCR1_CANAL1.625e-2536.73NADH-cytochrome b5 reductase 2 OS=Candida albicans... [more]
MCR1_DEBHA2.123e-2539.55NADH-cytochrome b5 reductase 2 OS=Debaryomyces han... [more]
MCR1_BOTFB2.123e-2535.89NADH-cytochrome b5 reductase 2 OS=Botryotinia fuck... [more]

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Properties
Property NameValue
Genbank descriptionC34105G03EF PostHarvP1 Citrus clementina cDNA clone C34105G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931496 ID=FC931496; Name=FC931496; organism=Citrus clementina; type=EST; length=710bp
GACTTTTCTTTGCTTTGCTTCTCTCTCCAACATTAGAAAATGGCTACGAC
CTTCTTCAGAAGACTGGCTAAAGCTACTCCAATTGCATTCAACGAGGCAT
TTGGAGGGCAACCCAAGTCCGATTTCAACAAATTTCGATTTCCCTTTGGA
GCAATCGCTGCTGTTGCTGGTGGAGTCTCCTATTACTGTTACTTTTCATC
CCCAAATTTGGTTCATCTAGATCAAATCAATGAAGAGACGGGTCCAAAAA
TTGCTCTCAATCCGGACAAGTGGATTGGATTTAAGTTGCAAGACACTGCA
AGGGTAAGCCACAATAGTCATTTGTTCAGGTTTTCATTTGATCCATCTGC
CAAGTTGGGTTTGGATGTTGCTTCATGCATCCTTACAAGGGCTCCATTAG
GACAAGATGCTGAAGGAAATACAAAATATGTTGTACGGCCGTATACTCCT
ATATCAGATACAGAAGCTAAGGGACACTTTGACTTGTTAATTAAGGTTTA
TCCTGAGGGTAAAATGAGTCAGCATTTTGCTAGCTTAAAACCAGGGGATG
TAGTTGAAGTGAAAGGACCCATTGAAAAGCTCCGATACTCTCCCAATATG
AAGAAACACATCGGCATGATAGCTGGTGGCACAGGTATAACTCCTATGCT
TCAGGTAATTGAGGCTATACTGAAGAATCAGATGACACACTCAGGTGTCA
CTGCTGTATG
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