FC931496

Overview
NameFC931496
Unique NameFC931496
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: MCR1_LODEL (NADH-cytochrome b5 reductase 2 OS=Lodderomyces elongisporus GN=MCR1 PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.176e-25
Identity = 69/198 (34.85%), Postives = 103/198 (52.02%), Query Frame = 1
Query:  124 FNKFRFPFGAIAAVAGGVSYYCYFSSPNLVHLDQINEETGPKIALNPDKWIGFKLQDTARVSHNS-HLFRFSFDPSAKLGLDVASCILTR--APLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAILKNQMTHSGVTAV 708
            F+  +F +  + A  G +    Y +         I  ETG K     D+WI  KL+ +  ++HN+ HL     +P    GL  AS ++T+   P G +       V+RPYTP+SD + KG  D +IK Y  GKMS H  +LK G+ +  KGP+ K ++ PN  K I +I GGTGITP+ Q++  I  N    + V+ +
Sbjct:    7 FSNPKFVYPLVGATIGSIGLAYYSTQAQFY----IANETG-KTFTGGDQWIDLKLKKSEDLTHNTKHLTFELLNPDDVSGLITASMLMTKYVTPKGNN-------VIRPYTPVSDPDQKGTLDFVIKRYENGKMSNHIHNLKEGETLSFKGPVVKWKWEPNQFKSIALIGGGTGITPLYQLLREITSNPEDKTKVSLI 192          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: MCR1_AJECN (NADH-cytochrome b5 reductase 2 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=MCR1 PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.176e-25
Identity = 71/195 (36.41%), Postives = 97/195 (49.74%), Query Frame = 1
Query:  136 RFPFGAIAAVAGGVSYYCYFSSPNLVHLDQINEETGPKIALNPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDT---EAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAILKNQMTHSGVTAV 708
            R P      +A G  YY Y+ + +        +E           WIG KL     V+HN    RF F DP +  GL +AS +LT+     D     K  +RPYTP+SD     + G+ DLL+K YP G MS H  ++  G  ++ KGP+ K  + P+   HI +IAGGTGITPM Q++  I  N    + VT V
Sbjct:   30 RIPLIGGITLAAGAGYYYYWQTTSA---KSEPKERSTVFKGGDQGWIGLKLAHIDNVNHNVKKLRFEFEDPESVSGLHIASALLTKYKGLTDE----KPTIRPYTPVSDEGMWASLGYLDLLVKRYPNGPMSNHLHNMAVGQRLDFKGPLPKYPWEPSKHDHICLIAGGTGITPMYQLVRKIFSNPEDKTKVTLV 217          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: MCR1_PHANO (NADH-cytochrome b5 reductase 2 OS=Phaeosphaeria nodorum GN=MCR1 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.066e-25
Identity = 61/147 (41.50%), Postives = 88/147 (59.86%), Query Frame = 1
Query:  271 WIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAILKNQMTHSGVTAV 708
            +I   L  +  V+HN+    F   +P  + GL V S ++T+   G + E   K V+RPYTP+SD + +G  D ++K Y +G MS H  +++PG  +++KGPI K  +SPN  +HI +IAGGTGITPM Q   AI KN    + VT V
Sbjct:   86 FISLLLDKSEVVNHNTKKLTFKLPEPDMESGLPVTSAVITKYK-GPEME---KPVIRPYTPVSDVDQQGTVDFIVKKYEKGPMSSHMHNMEPGQRLDIKGPIPKYPWSPNKHEHIALIAGGTGITPMWQTARAIFKNPEDKTKVTLV 228          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: YMM5_YEAST (Uncharacterized oxidoreductase YML125C OS=Saccharomyces cerevisiae GN=YML125C PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.053e-24
Identity = 56/141 (39.72%), Postives = 84/141 (59.57%), Query Frame = 1
Query:  253 ALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK-LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAIL 672
            +L PD+W   +L+D   +S N+ L+RF      + L +     +  R P+      + K  VR Y PIS     G+ DL++K Y +GK+S++FA L  GD V+ KGPI  L Y PN  KH+G++AGG+GITP+LQ++  I+
Sbjct:   66 SLYPDRWTSLELEDQTIISKNTALYRFKLKTRLESLDIPAGHHVAVRVPI------DGKQEVRYYNPISSKLESGYLDLVVKAYVDGKVSKYFAGLNSGDTVDFKGPIGTLNYEPNSSKHLGIVAGGSGITPVLQILNEII 200          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: MCR1_SCLS1 (NADH-cytochrome b5 reductase 2 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=mcr1 PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.053e-24
Identity = 64/147 (43.54%), Postives = 84/147 (57.14%), Query Frame = 1
Query:  271 WIGFKLQDTARVSHNSHLFRFSFDPSAKL-GLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAILKNQMTHSGVTAV 708
            +I  KL     V+HN+  FRF    S ++ GL V S ++T+   G + +   K  +RPYTP SD   KG  DLL+K YP G MS+H   + PG  ++ KGPI K  +S N   HI +IAGGTGITPM Q+  AI  N    + VT V
Sbjct:   96 FISLKLDSVELVNHNTKKFRFELPESDQVSGLHVTSALITKYK-GPEMQ---KPAIRPYTPTSDEGEKGFIDLLVKKYPNGVMSEHMHEMVPGQRLDFKGPIPKYAWSANKHDHIALIAGGTGITPMYQLARAIFNNPADKTKVTLV 238          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: MCR1_PICST (NADH-cytochrome b5 reductase 2 OS=Pichia stipitis GN=MCR1 PE=3 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 4.003e-24
Identity = 72/187 (38.50%), Postives = 99/187 (52.94%), Query Frame = 1
Query:  127 NKFRFPFGAIAAVAGGVSYYCYFSSPNLVHLDQINEETGPKIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAKL-GLDVASCILTR--APLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAILKN 678
            +KF  P   +AA A G++ Y + SS  +      NE +  K     D+WI  KL  +  +SH++    F       + GL  AS ++T+   P G +       V+RPYTP+SDTE  G  D ++K Y  GKMS H   LKP D +  KGP  K ++ PN  K I +I GGTGITP+ Q+I  I KN
Sbjct:   13 SKFVLP---VAAAAVGLASYSFTSSSFIA-----NEPS--KAFKGGDEWIDLKLISSHDLSHDTKHLVFELPNKDDVSGLVTASLLMTKFVTPKGSN-------VIRPYTPVSDTEQAGTIDFVVKKYEGGKMSSHIHDLKPNDTLSFKGPFVKWKWEPNQFKSIALIGGGTGITPLYQLIHEITKN 182          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NCB5R_KLULA (NADH-cytochrome b5 reductase 1 OS=Kluyveromyces lactis GN=CBR1 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.228e-24
Identity = 64/156 (41.03%), Postives = 93/156 (59.62%), Query Frame = 1
Query:  247 KIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK-LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPIS-DTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAILKNQMTHSGVTAV 708
            K  L+ +K   F L     ++HN+ ++RF    S + LGL +   I  +A +      N K ++R YTP S D++A GHF+LLIK Y +G +S+HFA L  GD ++V+GP     Y PNM + IGMIAGGTGI PM Q++++I  N    + V+ V
Sbjct:   31 KPVLDKEKLQEFPLVAKTVLTHNTAIYRFGLPKSTQVLGLPIGQHISVQANI------NGKDILRSYTPTSLDSDAVGHFELLIKSYEKGNISKHFAQLNIGDKIKVRGPKGFYHYQPNMNEEIGMIAGGTGIAPMYQIMKSIFANDSDKTKVSLV 180          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: MCR1_YEAST (NADH-cytochrome b5 reductase 2 OS=Saccharomyces cerevisiae GN=MCR1 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.918e-24
Identity = 66/179 (36.87%), Postives = 93/179 (51.96%), Query Frame = 1
Query:  151 AIAAVAGGVSYYCYFSSPNLVHLDQINEETGPKIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPS-AKLGLDVASCILTR--APLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAILKN 678
            A+  VA   +   YF++ N  H    NE    K+    DKWI   +      SH++  F F      +++GL +AS +  +   P G +       VVRPYTP+SD   KGHF L++K Y  GKM+ H   LKP D V  KGPI K ++ PN  K I ++  GTGI P+ Q+   I++N
Sbjct:   16 ALGTVAIAAATAFYFANRNQ-HSFVFNESN--KVFKGDDKWIDLPISKIEEESHDTRRFTFKLPTEDSEMGLVLASALFAKFVTPKGSN-------VVRPYTPVSDLSQKGHFQLVVKHYEGGKMTSHLFGLKPNDTVSFKGPIMKWKWQPNQFKSITLLGAGTGINPLYQLAHHIVEN 184          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: MCR1_YEAS7 (NADH-cytochrome b5 reductase 2 OS=Saccharomyces cerevisiae (strain YJM789) GN=MCR1 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.918e-24
Identity = 66/179 (36.87%), Postives = 93/179 (51.96%), Query Frame = 1
Query:  151 AIAAVAGGVSYYCYFSSPNLVHLDQINEETGPKIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPS-AKLGLDVASCILTR--APLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAILKN 678
            A+  VA   +   YF++ N  H    NE    K+    DKWI   +      SH++  F F      +++GL +AS +  +   P G +       VVRPYTP+SD   KGHF L++K Y  GKM+ H   LKP D V  KGPI K ++ PN  K I ++  GTGI P+ Q+   I++N
Sbjct:   16 ALGTVAIAAATAFYFANRNQ-HSFVFNESN--KVFKGDDKWIDLPISKIEEESHDTRRFTFKLPTEDSEMGLVLASALFAKFVTPKGSN-------VVRPYTPVSDLSQKGHFQLVVKHYEGGKMTSHLFGLKPNDTVSFKGPIMKWKWQPNQFKSITLLGAGTGINPLYQLAHHIVEN 184          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: MCR1_CANGA (NADH-cytochrome b5 reductase 2 OS=Candida glabrata GN=MCR1 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.165e-23
Identity = 64/182 (35.16%), Postives = 97/182 (53.30%), Query Frame = 1
Query:  139 FPFGAIAAVAGGVSYYCYFSSPNLVHLDQINEETGPKIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAKL-GLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAILKNQ 681
            F  GA+A  AG +    Y +  N +      +   PK+ +   KWI  +L+     SH++  F F       + GL +AS +LT+       +GN   V+RPYTP+SD   KG+ + +IK Y  GKM+ H   LKP D +  +GPI K ++ PN    I ++ GGTGITP+ Q++  I +N+
Sbjct:   16 FAIGAVAVTAGAL----YLNGWNTI------KNENPKVFIGDRKWIDLELEKIIEESHDTKRFFFKLPTDDSVSGLTLASAVLTKF---MTPKGNP--VIRPYTPVSDLSEKGYIEFVIKHYEGGKMTDHLFQLKPKDTLAFQGPIPKWQWKPNSFDTITLLGGGTGITPLYQLVHHITQNK 182          
The following BLAST results are available for this feature:
BLAST of FC931496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
MCR1_LODEL6.176e-2534.85NADH-cytochrome b5 reductase 2 OS=Lodderomyces elo... [more]
MCR1_AJECN6.176e-2536.41NADH-cytochrome b5 reductase 2 OS=Ajellomyces caps... [more]
MCR1_PHANO8.066e-2541.50NADH-cytochrome b5 reductase 2 OS=Phaeosphaeria no... [more]
YMM5_YEAST1.053e-2439.72Uncharacterized oxidoreductase YML125C OS=Saccharo... [more]
MCR1_SCLS11.053e-2443.54NADH-cytochrome b5 reductase 2 OS=Sclerotinia scle... [more]
MCR1_PICST4.003e-2438.50NADH-cytochrome b5 reductase 2 OS=Pichia stipitis ... [more]
NCB5R_KLULA5.228e-2441.03NADH-cytochrome b5 reductase 1 OS=Kluyveromyces la... [more]
MCR1_YEAST8.918e-2436.87NADH-cytochrome b5 reductase 2 OS=Saccharomyces ce... [more]
MCR1_YEAS78.918e-2436.87NADH-cytochrome b5 reductase 2 OS=Saccharomyces ce... [more]
MCR1_CANGA1.165e-2335.16NADH-cytochrome b5 reductase 2 OS=Candida glabrata... [more]

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Properties
Property NameValue
Genbank descriptionC34105G03EF PostHarvP1 Citrus clementina cDNA clone C34105G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931496 ID=FC931496; Name=FC931496; organism=Citrus clementina; type=EST; length=710bp
GACTTTTCTTTGCTTTGCTTCTCTCTCCAACATTAGAAAATGGCTACGAC
CTTCTTCAGAAGACTGGCTAAAGCTACTCCAATTGCATTCAACGAGGCAT
TTGGAGGGCAACCCAAGTCCGATTTCAACAAATTTCGATTTCCCTTTGGA
GCAATCGCTGCTGTTGCTGGTGGAGTCTCCTATTACTGTTACTTTTCATC
CCCAAATTTGGTTCATCTAGATCAAATCAATGAAGAGACGGGTCCAAAAA
TTGCTCTCAATCCGGACAAGTGGATTGGATTTAAGTTGCAAGACACTGCA
AGGGTAAGCCACAATAGTCATTTGTTCAGGTTTTCATTTGATCCATCTGC
CAAGTTGGGTTTGGATGTTGCTTCATGCATCCTTACAAGGGCTCCATTAG
GACAAGATGCTGAAGGAAATACAAAATATGTTGTACGGCCGTATACTCCT
ATATCAGATACAGAAGCTAAGGGACACTTTGACTTGTTAATTAAGGTTTA
TCCTGAGGGTAAAATGAGTCAGCATTTTGCTAGCTTAAAACCAGGGGATG
TAGTTGAAGTGAAAGGACCCATTGAAAAGCTCCGATACTCTCCCAATATG
AAGAAACACATCGGCATGATAGCTGGTGGCACAGGTATAACTCCTATGCT
TCAGGTAATTGAGGCTATACTGAAGAATCAGATGACACACTCAGGTGTCA
CTGCTGTATG
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