FC931496

Overview
NameFC931496
Unique NameFC931496
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: MCR1_ASHGO (NADH-cytochrome b5 reductase 2 OS=Ashbya gossypii GN=MCR1 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.859e-21
Identity = 69/193 (35.75%), Postives = 95/193 (49.22%), Query Frame = 1
Query:  139 FPFGAIAAVAGGVSYYCYFSSPNLVHLDQINEETGPKIA---LNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAKL-GLDVASCILTR--APLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAILKNQMTHSGV 699
            F  G  A  A G  Y    S  NL       + TG   A       +W   K+    +VSH++  F F+      + GL  AS +L +   P G +       V+RPYTP+SD  A+G F L+IK Y  GK + H   LK  D VE KGPI+K R+ PNM   I ++  GTGITP+ Q++  I +N   ++ V
Sbjct:   14 FALGTTAVAAAGYLYAQ--SRGNLSTSLNKGDVTGQAAAQTFTGDGQWHALKIAKIEQVSHDTRRFTFALPSQDHVTGLTTASALLAKYVTPKGSN-------VIRPYTPVSDNMARGMFQLVIKHYDGGKFTTHLFGLKENDTVEFKGPIQKWRWDPNMFDSIVLMGAGTGITPLFQMMHHIAENPTDNTKV 197          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NB5R3_PIG (NADH-cytochrome b5 reductase 3 (Fragment) OS=Sus scrofa GN=CYB5R3 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.429e-21
Identity = 75/177 (42.37%), Postives = 96/177 (54.24%), Query Frame = 1
Query:  244 PKIAL-NPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPE---------GKMSQHFASLKPGDVVEVKGPIEKLRY--------------SPNMK--KHIGMIAGGTGITPMLQVIEAILKNQMTHS 693
            P I L NPD     +L D   V+H++  FRF+   P   LGL V   I   A +    +GN   V+RPYTP+S  + KG  DL+IKVY +         GKMSQ+  S+K GD +E +GP   L Y              SP +K  K +GMIAGGTGITPMLQVI AI+K+   H+
Sbjct:    3 PAITLENPDIKYPLRLIDKEVVNHDTRRFRFALPSPEHILGLPVGQHIYLSARI----DGNL--VIRPYTPVSSDDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMKIGDTIEFRGPNGLLVYQGKGKFAIRPDKKSSPVIKTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHT 173          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NB5R3_HUMAN (NADH-cytochrome b5 reductase 3 OS=Homo sapiens GN=CYB5R3 PE=1 SV=3)

HSP 1 Score: 100.908 bits (250), Expect = 7.066e-21
Identity = 75/186 (40.32%), Postives = 100/186 (53.76%), Query Frame = 1
Query:  217 LDQINEETGPKIAL-NPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPE---------GKMSQHFASLKPGDVVEVKGPIEKLRYS--------PNMK--------KHIGMIAGGTGITPMLQVIEAILKNQMTHS 693
            L ++ + + P I L +PD     +L D   +SH++  FRF+   P   LGL V   I   A +    +GN   VVRPYTPIS  + KG  DL+IKVY +         GKMSQ+  S++ GD +E +GP   L Y         P+ K        K +GMIAGGTGITPMLQVI AI+K+   H+
Sbjct:   23 LMKLFQRSTPAITLESPDIKYPLRLIDREIISHDTRRFRFALPSPQHILGLPVGQHIYLSARI----DGNL--VVRPYTPISSDDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMQIGDTIEFRGPSGLLVYQGKGKFAIRPDKKSNPIIRTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHT 202          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NCB5R_YEAS7 (NADH-cytochrome b5 reductase 1 OS=Saccharomyces cerevisiae (strain YJM789) GN=CBR1 PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 9.228e-21
Identity = 59/164 (35.98%), Postives = 92/164 (56.10%), Query Frame = 1
Query:  226 INEETGPKIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK--LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPIS-DTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAILKNQMTHSGVTAV 708
            I  +T P +    + +  F L +   ++HN+ +++F   P A   LGL +   I+ +A +      N K + R YTP S D + KG+F+LL+K YP G +S+    LK GD +++KGP     Y  N + H+GMIAGGTGI PM Q+++AI  +    + V+ V
Sbjct:   25 IGPKTKPVLDPKRNDFQSFPLVEKTILTHNTSMYKFGL-PHADDVLGLPIGQHIVIKANI------NGKDITRSYTPTSLDGDTKGNFELLVKSYPTGNVSKMIGELKIGDSIQIKGPRGNYHYERNCRSHLGMIAGGTGIAPMYQIMKAIAMDSHDTTKVSLV 181          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NCB5R_YEAST (NADH-cytochrome b5 reductase 1 OS=Saccharomyces cerevisiae GN=CBR1 PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.205e-20
Identity = 57/151 (37.75%), Postives = 87/151 (57.62%), Query Frame = 1
Query:  226 INEETGPKIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK--LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPIS-DTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAI 669
            I  +T P +    + +  F L +   ++HN+ +++F   P A   LGL +   I+ +A +      N K + R YTP S D + KG+F+LL+K YP G +S+    LK GD +++KGP     Y  N + H+GMIAGGTGI PM Q+++AI
Sbjct:   25 IGPKTKPVLDPKRNDFQSFPLVEKTILTHNTSMYKFGL-PHADDVLGLPIGQHIVIKANI------NGKDITRSYTPTSLDGDTKGNFELLVKSYPTGNVSKMIGELKIGDSIQIKGPRGNYHYERNCRSHLGMIAGGTGIAPMYQIMKAI 168          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NB5R3_MACFA (NADH-cytochrome b5 reductase 3 OS=Macaca fascicularis GN=CYB5R3 PE=2 SV=3)

HSP 1 Score: 99.7525 bits (247), Expect = 1.574e-20
Identity = 72/177 (40.68%), Postives = 95/177 (53.67%), Query Frame = 1
Query:  244 PKIAL-NPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPE---------GKMSQHFASLKPGDVVEVKGPIEKLRYS--------PNMK--------KHIGMIAGGTGITPMLQVIEAILKNQMTHS 693
            P I L +PD     +L D   +SH++  FRF+   P   LGL V   I   A +    +GN   V+RPYTP+S  + KG  DL+IKVY +         GKMSQ+  S++ GD +E +GP   L Y         P+ K        K +GMIAGGTGITPMLQVI AI+K+   H+
Sbjct:   32 PAITLESPDIKYSLRLIDREIISHDTRRFRFALPSPQHILGLPVGQHIYLSARI----DGNL--VIRPYTPVSSDDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMQIGDTIEFRGPNGLLVYQGKGKFAIRPDKKSNPVIKTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHT 202          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NB5R3_RAT (NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus GN=Cyb5r3 PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 2.056e-20
Identity = 69/181 (38.12%), Postives = 93/181 (51.38%), Query Frame = 1
Query:  232 EETGPKIAL-NPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPE---------GKMSQHFASLKPGDVVEVKGPIEKLRYSPNMK----------------KHIGMIAGGTGITPMLQVIEAILKNQMTHS 693
            + + P I L NPD     +L D   +SH++  FRF+   P   LGL +   I     L    +GN   V+RPYTP+S  + KG  DL++KVY +         GKMSQ+  ++  GD +E +GP   L Y    K                K +GMIAGGTGITPMLQVI A+LK+   H+
Sbjct:   28 QRSSPAITLENPDIKYPLRLIDKEIISHDTRRFRFALPSPQHILGLPIGQHIY----LSTRIDGNL--VIRPYTPVSSDDDKGFVDLVVKVYFKDTHPKFPAGGKMSQYLENMNIGDTIEFRGPNGLLVYQGKGKFAIRADKKSNPVVRTVKSVGMIAGGTGITPMLQVIRAVLKDPNDHT 202          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NB5R3_CANFA (NADH-cytochrome b5 reductase 3 OS=Canis familiaris GN=CYB5R3 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.507e-20
Identity = 72/181 (39.78%), Postives = 98/181 (54.14%), Query Frame = 1
Query:  217 LDQINEETGPKIAL-NPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPE---------GKMSQHFASLKPGDVVEVKGPIEKLRYS--------PNMK--------KHIGMIAGGTGITPMLQVIEAILKN 678
            L ++ + + P I L +PD     +L D   ++H++  FRF+   P   LGL V   I   A +    +GN   V+RPYTP+S  + KG  DL+IKVY +         GKMSQ+  S+K GD +E +GP   L Y         P+ K        K +GMIAGGTGITPMLQVI AI+K+
Sbjct:   23 LMKLFQRSTPAITLESPDIKYPLRLIDKEVINHDTRRFRFALPSPQHILGLPVGQHIYLSARI----DGNL--VIRPYTPVSSDDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMKIGDTIEFRGPNGLLVYQGKGKFAIRPDKKSNPIIKTVKSVGMIAGGTGITPMLQVIRAIIKD 197          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NIA1_PHAVU (Nitrate reductase [NADH] 1 OS=Phaseolus vulgaris GN=NIA1 PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.580e-20
Identity = 67/183 (36.61%), Postives = 95/183 (51.91%), Query Frame = 1
Query:  196 SSPNLVHLDQINEETGP--KIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK-LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGK---------MSQHFASLKPGDVVEVKGPIEKLRYS----------PNMKKHIGMIAGGTGITPMLQVIEAILKN 678
            SS N VH +       P  ++ALNP + I  KL     +SH+  L RF+     + +GL V + +   A + +      K  +R YTP S  +  G FDL++KVY +G          MSQH  SL  G VV+VKGP+  + Y+          P   K + M+AGGTGITP+ QV++AILK+
Sbjct:  600 SSNNSVHGNSETTHLAPIREVALNPREKIPCKLLSKTSISHDVRLLRFALPAEDQVMGLPVGNHVFLCATVDE------KLCMRAYTPTSSVDEVGFFDLVVKVYFKGVHPNFPNGGIMSQHLDSLPIGSVVDVKGPLGHIEYTGRGNFLVHGKPRFAKRLTMLAGGTGITPIYQVVQAILKD 776          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NB5R2_XENTR (NADH-cytochrome b5 reductase 2 OS=Xenopus tropicalis GN=cyb5r2 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.580e-20
Identity = 68/172 (39.53%), Postives = 90/172 (52.33%), Query Frame = 1
Query:  244 PKIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK--LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVY--------PEG-KMSQHFASLKPGDVVEVKGPIEKLRYS--------------PNMK--KHIGMIAGGTGITPMLQVIEAILKN 678
            P   L+P+      L +   +SH++  FRF   PS +  LGL V   +   A +      N   VVR YTP+S  E KGH DL++KVY        PEG KMSQH  SLK G+ ++ +GP   L Y               P +K  KH+GM+AGGTGITPMLQ+I  I ++
Sbjct:   36 PLTLLDPNAKYPLPLIEKQEISHDTKKFRFGL-PSQEHVLGLPVGQHVYLSAKI------NGSLVVRAYTPVSSDEVKGHVDLIVKVYYKNVHPKFPEGGKMSQHLDSLKIGETIDFRGPNGLLVYKEKGKFAIRPDKKSEPKLKVAKHVGMLAGGTGITPMLQLIRQITQD 200          
The following BLAST results are available for this feature:
BLAST of FC931496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
MCR1_ASHGO1.859e-2135.75NADH-cytochrome b5 reductase 2 OS=Ashbya gossypii ... [more]
NB5R3_PIG2.429e-2142.37NADH-cytochrome b5 reductase 3 (Fragment) OS=Sus s... [more]
NB5R3_HUMAN7.066e-2140.32NADH-cytochrome b5 reductase 3 OS=Homo sapiens GN=... [more]
NCB5R_YEAS79.228e-2135.98NADH-cytochrome b5 reductase 1 OS=Saccharomyces ce... [more]
NCB5R_YEAST1.205e-2037.75NADH-cytochrome b5 reductase 1 OS=Saccharomyces ce... [more]
NB5R3_MACFA1.574e-2040.68NADH-cytochrome b5 reductase 3 OS=Macaca fascicula... [more]
NB5R3_RAT2.056e-2038.12NADH-cytochrome b5 reductase 3 OS=Rattus norvegicu... [more]
NB5R3_CANFA3.507e-2039.78NADH-cytochrome b5 reductase 3 OS=Canis familiaris... [more]
NIA1_PHAVU4.580e-2036.61Nitrate reductase [NADH] 1 OS=Phaseolus vulgaris G... [more]
NB5R2_XENTR4.580e-2039.53NADH-cytochrome b5 reductase 2 OS=Xenopus tropical... [more]

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Properties
Property NameValue
Genbank descriptionC34105G03EF PostHarvP1 Citrus clementina cDNA clone C34105G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931496 ID=FC931496; Name=FC931496; organism=Citrus clementina; type=EST; length=710bp
GACTTTTCTTTGCTTTGCTTCTCTCTCCAACATTAGAAAATGGCTACGAC
CTTCTTCAGAAGACTGGCTAAAGCTACTCCAATTGCATTCAACGAGGCAT
TTGGAGGGCAACCCAAGTCCGATTTCAACAAATTTCGATTTCCCTTTGGA
GCAATCGCTGCTGTTGCTGGTGGAGTCTCCTATTACTGTTACTTTTCATC
CCCAAATTTGGTTCATCTAGATCAAATCAATGAAGAGACGGGTCCAAAAA
TTGCTCTCAATCCGGACAAGTGGATTGGATTTAAGTTGCAAGACACTGCA
AGGGTAAGCCACAATAGTCATTTGTTCAGGTTTTCATTTGATCCATCTGC
CAAGTTGGGTTTGGATGTTGCTTCATGCATCCTTACAAGGGCTCCATTAG
GACAAGATGCTGAAGGAAATACAAAATATGTTGTACGGCCGTATACTCCT
ATATCAGATACAGAAGCTAAGGGACACTTTGACTTGTTAATTAAGGTTTA
TCCTGAGGGTAAAATGAGTCAGCATTTTGCTAGCTTAAAACCAGGGGATG
TAGTTGAAGTGAAAGGACCCATTGAAAAGCTCCGATACTCTCCCAATATG
AAGAAACACATCGGCATGATAGCTGGTGGCACAGGTATAACTCCTATGCT
TCAGGTAATTGAGGCTATACTGAAGAATCAGATGACACACTCAGGTGTCA
CTGCTGTATG
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