FC931496

Overview
NameFC931496
Unique NameFC931496
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9476 contig Ccv1_Contig9476:13..722. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NB5R2_XENLA (NADH-cytochrome b5 reductase 2 OS=Xenopus laevis GN=cyb5r2 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.580e-20
Identity = 68/172 (39.53%), Postives = 90/172 (52.33%), Query Frame = 1
Query:  244 PKIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK--LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPE---------GKMSQHFASLKPGDVVEVKGPIEKLRYS--------------PNMK--KHIGMIAGGTGITPMLQVIEAILKN 678
            P   L+P+      L +   +SH++  FRF   PSA+  LGL V   I   A +      N   VVR YTP+S  E KGH DL++KVY +         GKMSQH  SLK G+ ++ +GP   L Y               P +K  KH+GM+AGGTGITPMLQ+I  I ++
Sbjct:   28 PVTLLDPNAKYPLPLIEKQEISHDTKKFRFGL-PSAEHVLGLPVGQHIYLSAKV------NGSLVVRAYTPVSSDEVKGHVDLVVKVYYKNVNPKFPDGGKMSQHLDSLKIGETIDFRGPNGLLVYKGKGKFAIRPDKKAEPKIKVAKHVGMLAGGTGITPMLQLIRQITQD 192          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: MCR1_KLULA (NADH-cytochrome b5 reductase 2 OS=Kluyveromyces lactis GN=MCR1 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.812e-20
Identity = 53/147 (36.05%), Postives = 78/147 (53.06%), Query Frame = 1
Query:  247 KIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAKL-GLDVASCILTR--APLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAILKN 678
            K  L  ++WI   +    ++SH++  F F+     ++ GL  ASCIL +   P G +       V+RPYTP+SD   KG  +L++K Y  GK + H   LK  D V  KGPI K  + PN    I ++  GTGI P+ Q++  I +N
Sbjct:   41 KAFLGDNEWIDLPIIKIEKLSHDTKRFTFALPKKDQVSGLITASCILAKFVTPKGSN-------VIRPYTPVSDNGTKGKMELVVKHYENGKFTSHLFGLKENDTVSFKGPITKWEWKPNSYDSITLLGAGTGINPLYQLVHHIAEN 180          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NB5R3_MOUSE (NADH-cytochrome b5 reductase 3 OS=Mus musculus GN=Cyb5r3 PE=1 SV=3)

HSP 1 Score: 96.6709 bits (239), Expect = 1.333e-19
Identity = 69/181 (38.12%), Postives = 93/181 (51.38%), Query Frame = 1
Query:  232 EETGPKIAL-NPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPE---------GKMSQHFASLKPGDVVEVKGPIEKLRYSPNMK----------------KHIGMIAGGTGITPMLQVIEAILKNQMTHS 693
            + + P I L NPD     +L D   +S ++  FRF+   P   LGL +   I     L    +GN   V+RPYTP+S  + KG  DL++KVY +         GKMSQ+  ++K GD +E +GP   L Y    K                K +GMIAGGTGITPMLQVI A+LK+   H+
Sbjct:   28 QRSTPAITLENPDIKYPLRLIDKEVISPDTRRFRFALPSPQHILGLPIGQHIY----LSTRIDGNL--VIRPYTPVSSDDDKGFVDLVVKVYFKDTHPKFPAGGKMSQYLENMKIGDTIEFRGPNGLLVYQGKGKFAIRADKKSNPVVRTVKSVGMIAGGTGITPMLQVIRAVLKDPNDHT 202          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NIA_VOLCA (Nitrate reductase [NADH] OS=Volvox carteri GN=NITA PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.740e-19
Identity = 65/176 (36.93%), Postives = 92/176 (52.27%), Query Frame = 1
Query:  244 PKIALNPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVY--------PEG-KMSQHFASLKPGDVVEVKGPIEKL------RYSPNMK-----KHIGMIAGGTGITPMLQVIEAILKNQMTHSGVTAV 708
            P + LNP + +   L +   ++ N+ +FRF    P  ++GL V   + T A +      N + V+R YTPIS  E  G  D+LIKVY        P+G KMSQHF SL+ GD VE KGP+          Y+ N K      H+  +AGGTGITP   VI+A L++    + ++ V
Sbjct:  599 PLVVLNPRQKVKLPLIERIELNRNTRIFRFGLPSPQHRIGLPVGKHVFTYATI------NGENVMRAYTPISGDEELGRLDMLIKVYFANEHPAFPDGGKMSQHFESLRIGDTVEFKGPLGHFVYDGRGSYTLNGKLHKHATHMSFVAGGTGITPCYAVIKAALRDPEDKTQISLV 768          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NIA2_PHAVU (Nitrate reductase [NADH] 2 OS=Phaseolus vulgaris GN=NIA2 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.273e-19
Identity = 73/195 (37.44%), Postives = 95/195 (48.72%), Query Frame = 1
Query:  196 SSPN--------LVHLDQINEETG------PKIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAKL-GLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPE---------GKMSQHFASLKPGDVVEVKGPIEKLRYS----------PNMKKHIGMIAGGTGITPMLQVIEAILKN 678
            SSPN         +HL  INE T         +ALNP + I  KL     +SH+  LFRF      +L GL V   I   A +      + K  +R YTP S  E  G FDLLIKVY +         G MSQ+  SL  G +++VKGP+  + Y+              K + M+AGGTGITP+ QV +AILK+
Sbjct:  597 SSPNNSVHGNSEFIHLAPINEITTIPPLPPRSVALNPRQKIPCKLVSKTSISHDVRLFRFEMPSKNQLLGLPVGKHIFLCATI------DGKLCMRAYTPTSSVEEVGFFDLLIKVYFKDVHPKFPNGGLMSQYLESLSIGSMLDVKGPLGHIEYTGRGNFTVNGKSRFAKRLAMLAGGTGITPIYQVAQAILKD 785          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NIA2_SOYBN (Inducible nitrate reductase [NADH] 2 OS=Glycine max GN=INR2 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.638e-19
Identity = 69/183 (37.70%), Postives = 93/183 (50.82%), Query Frame = 1
Query:  199 SPNLVHLDQINEETGP--KIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAKL--GLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGK---------MSQHFASLKPGDVVEVKGPIEKLRYS----------PNMKKHIGMIAGGTGITPMLQVIEAILKN 678
            S + + L  I E   P   +ALNP + I  KL     +SH+  LFRF+  PS  L  GL V   I   A + +      K  +R YTP S     G+FDL++KVY +G          MSQH  SL  G V++VKGP+  + Y+          P     + M+AGGTGITP+ QV+ AILK+
Sbjct:  610 SSDTIPLTPIKEVITPMRSVALNPREKIPCKLISKTSISHDVRLFRFAL-PSDDLLMGLPVGKHIFLCATVDE------KLCMRAYTPTSSVHEVGYFDLVVKVYFKGVHPKFPTGGIMSQHLDSLPIGSVLDVKGPLGHIVYTGRGNFLVHGKPRFATRLAMLAGGTGITPIYQVVRAILKD 785          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NCB5R_YARLI (NADH-cytochrome b5 reductase 1 OS=Yarrowia lipolytica GN=CBR1 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.638e-19
Identity = 55/145 (37.93%), Postives = 81/145 (55.86%), Query Frame = 1
Query:  280 FKLQDTARVSHNSHLFRFSFD-PSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPIS-DTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAILKNQMTHSGVTAV 708
            F L     +SHNS ++RF    PS  LGL +   +   A +G       K V+R YTP S D   KG+FD+LIK YP+G +S++ + L  GD ++V+GP     Y+  + +  GM+ GGTGITPM Q++  I  +   ++ V  V
Sbjct:   52 FPLIQKTVLSHNSAIYRFGLPRPSHVLGLPIGQHVSLSANIGG------KEVLRSYTPTSSDLYDKGYFDILIKTYPQGNISKYVSELAIGDTMKVRGPKGNFVYNHGLVESFGMVCGGTGITPMYQILRHIAADPADNTKVNLV 190          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NIA1_ARATH (Nitrate reductase [NADH] 1 OS=Arabidopsis thaliana GN=NIA1 PE=1 SV=3)

HSP 1 Score: 93.5893 bits (231), Expect = 1.128e-18
Identity = 71/194 (36.60%), Postives = 99/194 (51.03%), Query Frame = 1
Query:  190 YFSSPNL-VH--------LDQINEETGPK-IAL-NPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPE---------GKMSQHFASLKPGDVVEVKGPIEKLRYS----------PNMKKHIGMIAGGTGITPMLQVIEAILKN 678
            Y SSPN+ VH        L  I E T  K IAL NP + I  +L +   +SH+   FRF+      +LGL V   +   A +      N K  +R YTP S  +A GH DL++KVY +         G MSQH  SL  G ++++KGP+  + Y           P   K + M+AGGTGITP+ Q+I++IL +
Sbjct:  624 YDSSPNVSVHGASNFGPLLAPIKELTPQKNIALVNPREKIPVRLIEKTSISHDVRKFRFALPSEDQQLGLPVGKHVFVCANI------NDKLCLRAYTPTSAIDAVGHIDLVVKVYFKDVHPRFPNGGLMSQHLDSLPIGSMIDIKGPLGHIEYKGKGNFLVSGKPKFAKKLAMLAGGTGITPIYQIIQSILSD 811          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: YMI7_YEAST (Uncharacterized oxidoreductase YML087C OS=Saccharomyces cerevisiae GN=YML087C PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.924e-18
Identity = 51/153 (33.33%), Postives = 85/153 (55.56%), Query Frame = 1
Query:  241 GPKIALNPDKWIGFKLQDTARVSHNSHLFRFSFD-PSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAILKN--QMTH 690
            G   +L  +KW+   L    R+S N+ L+ F    P  +L + +   +  R  +      N + +VR YTP++    +GH +L++K Y  G +S++F  LK    VE KGP+ +L Y  +    +G+IAGG+GITP+LQV++ I+ +   +TH
Sbjct:   62 GTDKSLYRNKWVALPLSKKTRISRNTSLYCFKLKYPFERLHIPMGYHLAVRVTI------NGERLVRYYTPVNVPNTEGHLELVVKTYKHGVVSKYFDKLKIRQYVEFKGPLGELEYDQDTATELGIIAGGSGITPVLQVLQEIIPSPEDLTH 208          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NIA7_HORVU (Nitrate reductase [NAD(P)H] OS=Hordeum vulgare GN=NAR-7 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.924e-18
Identity = 59/161 (36.65%), Postives = 84/161 (52.17%), Query Frame = 1
Query:  259 NPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPE---------GKMSQHFASLKPGDVVEVKGPIEKLRYSPN----------MKKHIGMIAGGTGITPMLQVIEAILKNQ 681
            NP + +  +L D   +SHN  LFRF+   P  KLGL V   +   A  G       K  +R YTP S  E  GH +LLIK+Y +         G MSQ+  +L  G  V++KGP+  + Y+              + + M+AGGTGITP+ QVI+A+L++Q
Sbjct:  628 NPREKVRCRLVDKKSMSHNVRLFRFALPSPDQKLGLPVGKHVYVCASTGG------KLCMRAYTPTSSVEEVGHVELLIKIYFKDEDPKFPAGGLMSQYLDALPLGAPVDIKGPVGHIEYAGRGAFTVGGERRFARRLAMVAGGTGITPVYQVIQAVLRDQ 782          
The following BLAST results are available for this feature:
BLAST of FC931496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
NB5R2_XENLA4.580e-2039.53NADH-cytochrome b5 reductase 2 OS=Xenopus laevis G... [more]
MCR1_KLULA7.812e-2036.05NADH-cytochrome b5 reductase 2 OS=Kluyveromyces la... [more]
NB5R3_MOUSE1.333e-1938.12NADH-cytochrome b5 reductase 3 OS=Mus musculus GN=... [more]
NIA_VOLCA1.740e-1936.93Nitrate reductase [NADH] OS=Volvox carteri GN=NITA... [more]
NIA2_PHAVU2.273e-1937.44Nitrate reductase [NADH] 2 OS=Phaseolus vulgaris G... [more]
NIA2_SOYBN8.638e-1937.70Inducible nitrate reductase [NADH] 2 OS=Glycine ma... [more]
NCB5R_YARLI8.638e-1937.93NADH-cytochrome b5 reductase 1 OS=Yarrowia lipolyt... [more]
NIA1_ARATH1.128e-1836.60Nitrate reductase [NADH] 1 OS=Arabidopsis thaliana... [more]
YMI7_YEAST1.924e-1833.33Uncharacterized oxidoreductase YML087C OS=Saccharo... [more]
NIA7_HORVU1.924e-1836.65Nitrate reductase [NAD(P)H] OS=Hordeum vulgare GN=... [more]

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Properties
Property NameValue
Genbank descriptionC34105G03EF PostHarvP1 Citrus clementina cDNA clone C34105G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931496 ID=FC931496; Name=FC931496; organism=Citrus clementina; type=EST; length=710bp
GACTTTTCTTTGCTTTGCTTCTCTCTCCAACATTAGAAAATGGCTACGAC
CTTCTTCAGAAGACTGGCTAAAGCTACTCCAATTGCATTCAACGAGGCAT
TTGGAGGGCAACCCAAGTCCGATTTCAACAAATTTCGATTTCCCTTTGGA
GCAATCGCTGCTGTTGCTGGTGGAGTCTCCTATTACTGTTACTTTTCATC
CCCAAATTTGGTTCATCTAGATCAAATCAATGAAGAGACGGGTCCAAAAA
TTGCTCTCAATCCGGACAAGTGGATTGGATTTAAGTTGCAAGACACTGCA
AGGGTAAGCCACAATAGTCATTTGTTCAGGTTTTCATTTGATCCATCTGC
CAAGTTGGGTTTGGATGTTGCTTCATGCATCCTTACAAGGGCTCCATTAG
GACAAGATGCTGAAGGAAATACAAAATATGTTGTACGGCCGTATACTCCT
ATATCAGATACAGAAGCTAAGGGACACTTTGACTTGTTAATTAAGGTTTA
TCCTGAGGGTAAAATGAGTCAGCATTTTGCTAGCTTAAAACCAGGGGATG
TAGTTGAAGTGAAAGGACCCATTGAAAAGCTCCGATACTCTCCCAATATG
AAGAAACACATCGGCATGATAGCTGGTGGCACAGGTATAACTCCTATGCT
TCAGGTAATTGAGGCTATACTGAAGAATCAGATGACACACTCAGGTGTCA
CTGCTGTATG
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