FC931496

Overview
NameFC931496
Unique NameFC931496
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NIA_BETVE (Nitrate reductase [NAD(P)H] OS=Betula verrucosa GN=NIA1 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.056e-16
Identity = 64/179 (35.75%), Postives = 89/179 (49.72%), Query Frame = 1
Query:  205 NLVHLDQINEETGPK-IALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK-LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPE---------GKMSQHFASLKPGDVVEVKGPIEKLRYS----------PNMKKHIGMIAGGTGITPMLQVIEAILKN 678
            N  HL  I E    + +AL P   I  KL     +SH+  LFR +     + LGL V   +   A +      + K  +R YTP S  +  G+ DL++K+Y +         G MSQH  SL  G V+ VKGP+  + Y+          P   K + M+AGGTGITP+ QVI+AILK+
Sbjct:  621 NTSHLAPIKEIAPLRNVALIPGAKIPTKLVYKKSLSHDVRLFRLALPSDDQVLGLPVGKHVFLCATI------DDKLCMRAYTPTSTIDEVGYLDLVVKIYFKNSNPRFPNGGLMSQHLDSLPIGSVLHVKGPLGHVEYTGRGNFLVHGEPKFAKRLAMVAGGTGITPIYQVIQAILKD 793          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NIA3_MAIZE (Nitrate reductase [NADH] 3 OS=Zea mays PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.056e-16
Identity = 62/167 (37.13%), Postives = 89/167 (53.29%), Query Frame = 1
Query:  244 PKIAL-NPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK-LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVY--------PEG-KMSQHFASLKPGDVVEVKGPIEKLRY----------SPNMKKHIGMIAGGTGITPMLQVIEAILKNQ 681
            P IAL NP + +  +L     +S +  LFRF+   S + LGL V   I   A +      + K  +R YTP S  +  GHFDLL+KVY        P+G +M+Q+  SL  G  V+VKGP+  + Y           P     + M+AGG+GITP+ QVI+A+L++Q
Sbjct:  622 PVIALSNPREKVPCQLVARTVLSRDVRLFRFALPSSGQVLGLPVGKHIFVCASI------DGKLCMRAYTPTSSVDEVGHFDLLVKVYFRNENTKFPDGGRMTQYLDSLPVGAHVDVKGPLGHVEYVGRGGFVIDGKPRKAGRLAMVAGGSGITPIYQVIQAVLRDQ 782          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NIA1_BRANA (Nitrate reductase [NADH], clone PBNBR1405 OS=Brassica napus GN=NIA1 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.056e-16
Identity = 58/161 (36.02%), Postives = 83/161 (51.55%), Query Frame = 1
Query:  256 LNPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPE---------GKMSQHFASLKPGDVVEVKGPIEKLRYS----------PNMKKHIGMIAGGTGITPMLQVIEAILKN 678
            +NP + +  KL +   +SH+   FRF+      +LGL V   I   A +      N K  +R YTP S  +A G+ DL+IKVY +         G MSQH  SL  G V+++KGP+  + Y           P     + M+AGGTGITP+ QVI++IL +
Sbjct:  651 VNPREKVPVKLIEKTSISHDVRRFRFALPSEDQQLGLPVGKHIFLCATI------NDKLCLRAYTPTSTVDAVGYIDLVIKVYFKNVHPRFPNGGLMSQHPDSLPIGAVLDIKGPLGHIEYQGRGKFMVSGKPKFANKLAMLAGGTGITPIYQVIQSILSD 805          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NIA_PICAN (Nitrate reductase [NADPH] OS=Pichia angusta GN=YNR1 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.379e-16
Identity = 57/183 (31.15%), Postives = 92/183 (50.27%), Query Frame = 1
Query:  205 NLVHLDQINEETGPKIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAKL-GLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVY------PEGK-MSQHFASLKPGDVVEVKGPIEKLRY----------SPNMKKHIGMIAGGTGITPMLQVIEAILKNQMTHSGV 699
            ++  +  + +    ++ L+P KW    L +   +S +S +F+F  + S +L GL     +  R    +D+ G  KYV+R YTP S    +G  ++LIKVY      P G  M+    +L+ G+ +EVKGP+ +  Y           P   KH  MI+GG+GITP  QV++AI  +    + V
Sbjct:  582 SVTKVKSVEQNVKREVLLDPRKWHKITLAEKEVISSDSRIFKFDLEHSEQLSGLPTGKHLFLRL---KDSSG--KYVMRAYTPKSSNSLRGRLEILIKVYFPNREYPNGGIMTNLIENLQVGNQIEVKGPVGEFEYVKCGHCSFNNKPYQMKHFVMISGGSGITPTYQVLQAIFSDPEDRTSV 759          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NIA1_MAIZE (Nitrate reductase [NADH] (Fragment) OS=Zea mays PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.379e-16
Identity = 63/178 (35.39%), Postives = 89/178 (50.00%), Query Frame = 1
Query:  208 LVHLDQINEETGPKIALNPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPE---------GKMSQHFASLKPGDVVEVKGPIEKLRYSPN-------MKKH---IGMIAGGTGITPMLQVIEAILKNQ 681
            L HL  I          NP + I  +L     +S +  LFRFS   P   LGL +   I   A +    EG  K  +R YTP S  +  GHFDLL+KVY +         G M+Q+  SL  G  ++VKGP+  + Y+          ++H   + MI GG+GITPM Q+I+A+L++Q
Sbjct:  342 LSHLAPIRRAVRAPALSNPREKIHCRLVGKKELSRDVRLFRFSLPSPDQVLGLPIGKHIFVCASI----EG--KLCMRAYTPTSMVDEIGHFDLLVKVYFKNEHPKFPNGGLMTQYLDSLPVGSYIDVKGPLGHVEYTGRGSFVINGKQRHASRLAMICGGSGITPMYQIIQAVLRDQ 513          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NB5R5_HUMAN (NADH-cytochrome b5 reductase-like OS=Homo sapiens GN=CYB5RL PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.801e-16
Identity = 48/151 (31.79%), Postives = 84/151 (55.63%), Query Frame = 1
Query:  256 LNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAILKNQMTHSGVTAV 708
            LNP+ ++ F +    R++ +++  RF+   +++LGL     ++ R  +  D E     + R YTPIS   A+G+F++LIK Y  G MS++  S + GD    +GP     Y PN    + ++A GTG+ PM+ ++++I  N+   + VT V
Sbjct:   71 LNPETFVAFCIIAMDRLTKDTYRVRFALPGNSQLGLRPGQHLILRG-IVDDLE-----IQRAYTPISPANAEGYFEVLIKCYQMGLMSRYVESWRVGDTAFWRGPFGDFFYKPNQYGELLLLAAGTGLAPMVPILQSITDNENDETFVTLV 215          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NB5R2_HUMAN (NADH-cytochrome b5 reductase 2 OS=Homo sapiens GN=CYB5R2 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.801e-16
Identity = 57/166 (34.34%), Postives = 85/166 (51.20%), Query Frame = 1
Query:  259 NPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVY--------PEG-KMSQHFASLKPGDVVEVKGPIEKLRY----------------SPNMKKHIGMIAGGTGITPMLQVIEAILKN 678
            +P+      L +  ++SHN+  FRF    P   LGL V + +   A +      + + VVR YTP+S  + +G  DL+IK+Y        PEG KM+Q+  ++K G+ +  +GP  +L Y                   +  H+GMIAGGTGITPMLQ+I  I K+
Sbjct:   13 DPEAKYPLPLIEKEKISHNTRRFRFGLPSPDHVLGLPVGNYVQLLAKI------DNELVVRAYTPVSSDDDRGFVDLIIKIYFKNVHPQYPEGGKMTQYLENMKIGETIFFRGPRGRLFYHGPGNLGIRPDQTSEPKKTLADHLGMIAGGTGITPMLQLIRHITKD 172          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NB5R2_DANRE (NADH-cytochrome b5 reductase 2 OS=Danio rerio GN=cyb5r2 PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.801e-16
Identity = 59/168 (35.12%), Postives = 86/168 (51.19%), Query Frame = 1
Query:  244 PKIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK-LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPE---------GKMSQHFASLKPGDVVEVKGPIEKLRYS--------PNMK--------KHIGMIAGGTGITPMLQVIEAI 669
            PK   +P       L +   ++H++  FRF    S+  LGL +   I   A +      N   VVR YTP+S  + +G+ DL++KVY +         GKMSQ+  ++K GD ++ +GP   L Y+        P+ K        KH+ MIAGGTGITPMLQ+I +I
Sbjct:   41 PKALQDPSVKYPLPLIEKEEINHDTKRFRFGLPSSSHVLGLPIGQHIYLSAKV------NGSLVVRAYTPVSSDQDQGYVDLVVKVYYKNTHPSYPDGGKMSQYLDNMKIGDTIDFRGPNGLLVYNGKGKFAIRPDKKSEAEVRKFKHVAMIAGGTGITPMLQLIRSI 202          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NIA_EMENI (Nitrate reductase [NADPH] OS=Emericella nidulans GN=niaD PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.012e-16
Identity = 52/159 (32.70%), Postives = 79/159 (49.69%), Query Frame = 1
Query:  256 LNPDKWIGFKLQDTARVSHNSHLFRFSFD-PSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVY------PEGKMSQHFASLKPGDVVEVKGPIEKLRY----------SPNMKKHIGMIAGGTGITPMLQVIEAILKNQ 681
            L P  W    L     VS ++H+F  S + PS  LGL     ++ + P  + +   +  ++R YTPIS ++  G  D+LIK+Y      P GKM+    +L  G V+E KGP  +  Y               K   MI GGTGITP+ QV+ A+++++
Sbjct:  613 LTPKAWTKATLTKKTSVSSDTHIFTLSLEHPSQALGLPTGQHLMLKTPDPKSSSSGS--IIRSYTPISPSDQLGMVDILIKIYAETPSIPGGKMTTALDTLPLGSVIECKGPTGRFEYLDRGRVLISGKERFVKSFVMICGGTGITPVFQVLRAVMQDE 769          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NIA1_HORVU (Nitrate reductase [NADH] OS=Hordeum vulgare PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.844e-16
Identity = 66/184 (35.87%), Postives = 97/184 (52.72%), Query Frame = 1
Query:  205 NLVHLDQINEET---GPKIALN-PDKWIGFKLQDTARVSHNSHLFRFSFDPSAK-LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVY-----PE----GKMSQHFASLKPGD-VVEVKGPIEKLRYS----------PNMKKHIGMIAGGTGITPMLQVIEAILKNQ 681
            +L HL  I E T   G  IAL+ P + +  +L D   +SH+  LFRF+   S + LGL V   I   A +      + K  +R YTP S  +  G F+LL+KVY     P+    G M+Q+  SL+ G   ++VKGP+  + Y+              + + MI GG+GITPM QVI+A+L++Q
Sbjct:  630 SLSHLAPIREATKVAGAPIALSSPREKVPCRLVDKKELSHDVRLFRFALPSSDQVLGLPVGKHIFVCATI------DGKLCMRAYTPTSMVDEIGQFELLVKVYFRDEHPKFPNGGLMTQYLESLQVGSSYIDVKGPLGHVEYTGRGNFVINGKQRRARRLAMICGGSGITPMYQVIQAVLRDQ 807          
The following BLAST results are available for this feature:
BLAST of FC931496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
NIA_BETVE1.056e-1635.75Nitrate reductase [NAD(P)H] OS=Betula verrucosa GN... [more]
NIA3_MAIZE1.056e-1637.13Nitrate reductase [NADH] 3 OS=Zea mays PE=3 SV=1[more]
NIA1_BRANA1.056e-1636.02Nitrate reductase [NADH], clone PBNBR1405 OS=Brass... [more]
NIA_PICAN1.379e-1631.15Nitrate reductase [NADPH] OS=Pichia angusta GN=YNR... [more]
NIA1_MAIZE1.379e-1635.39Nitrate reductase [NADH] (Fragment) OS=Zea mays PE... [more]
NB5R5_HUMAN1.801e-1631.79NADH-cytochrome b5 reductase-like OS=Homo sapiens ... [more]
NB5R2_HUMAN1.801e-1634.34NADH-cytochrome b5 reductase 2 OS=Homo sapiens GN=... [more]
NB5R2_DANRE1.801e-1635.12NADH-cytochrome b5 reductase 2 OS=Danio rerio GN=c... [more]
NIA_EMENI4.012e-1632.70Nitrate reductase [NADPH] OS=Emericella nidulans G... [more]
NIA1_HORVU6.844e-1635.87Nitrate reductase [NADH] OS=Hordeum vulgare PE=3 S... [more]

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Properties
Property NameValue
Genbank descriptionC34105G03EF PostHarvP1 Citrus clementina cDNA clone C34105G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931496 ID=FC931496; Name=FC931496; organism=Citrus clementina; type=EST; length=710bp
GACTTTTCTTTGCTTTGCTTCTCTCTCCAACATTAGAAAATGGCTACGAC
CTTCTTCAGAAGACTGGCTAAAGCTACTCCAATTGCATTCAACGAGGCAT
TTGGAGGGCAACCCAAGTCCGATTTCAACAAATTTCGATTTCCCTTTGGA
GCAATCGCTGCTGTTGCTGGTGGAGTCTCCTATTACTGTTACTTTTCATC
CCCAAATTTGGTTCATCTAGATCAAATCAATGAAGAGACGGGTCCAAAAA
TTGCTCTCAATCCGGACAAGTGGATTGGATTTAAGTTGCAAGACACTGCA
AGGGTAAGCCACAATAGTCATTTGTTCAGGTTTTCATTTGATCCATCTGC
CAAGTTGGGTTTGGATGTTGCTTCATGCATCCTTACAAGGGCTCCATTAG
GACAAGATGCTGAAGGAAATACAAAATATGTTGTACGGCCGTATACTCCT
ATATCAGATACAGAAGCTAAGGGACACTTTGACTTGTTAATTAAGGTTTA
TCCTGAGGGTAAAATGAGTCAGCATTTTGCTAGCTTAAAACCAGGGGATG
TAGTTGAAGTGAAAGGACCCATTGAAAAGCTCCGATACTCTCCCAATATG
AAGAAACACATCGGCATGATAGCTGGTGGCACAGGTATAACTCCTATGCT
TCAGGTAATTGAGGCTATACTGAAGAATCAGATGACACACTCAGGTGTCA
CTGCTGTATG
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