FC931499

Overview
NameFC931499
Unique NameFC931499
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length658
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931499 vs. ExPASy Swiss-Prot
Match: ARAE_BACSU (Arabinose-proton symporter OS=Bacillus subtilis GN=araE PE=2 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.449e-22
Identity = 72/213 (33.80%), Postives = 106/213 (49.77%), Query Frame = 2
Query:   23 WRIMLGVGILPSVFIALALFVIPESPRWLVMQGRIDEARFVLSKTN-ESVKEVEERLAEIQVAAGSANAEKNEEKAVWREIINPSPAVRRMLITGCGIQCFQQITGIDATVYYSPTIFKGAGIKGNNELLAATVAVGFTKTXXXXXXXXXXDKVGRKPLLYVSTIGMTICXXXXXXXXTFLGNGQLGIALAILSVCGNVAFFSVGIGPVCWVL 658
            WR ML  G++PSV   L L V+PESPRWL   G+ +EA  +L++ N E+V   +E L  I+      N+ K E+     ++    P +R+ L+ G  +  F Q+ G++A  YY P IFK  G  G N     T  VG  +           DKVGRK L+ + +  M I         +F      GI + +L + G VA F V +GP+ W++
Sbjct:  186 WRWMLAYGMVPSVIFFLVLLVVPESPRWLAKAGKTNEALKILTRINGETV--AKEELKNIE------NSLKIEQMGSLSQLF--KPGLRKALVIGILLALFNQVIGMNAITYYGPEIFKMMGF-GQNAGFVTTCIVGVVEVIFTVIAVLLIDKVGRKKLMSIGSAFMAI--FMILIGTSFYFELTSGIMMIVL-ILGFVAAFCVSVGPITWIM 384          
BLAST of FC931499 vs. ExPASy Swiss-Prot
Match: ITR1_YEAST (Myo-inositol transporter 1 OS=Saccharomyces cerevisiae GN=ITR1 PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 5.508e-22
Identity = 67/226 (29.65%), Postives = 115/226 (50.88%), Query Frame = 2
Query:   23 WRIMLGVGILPSVFIALALFVIPESPRWLVMQGRIDEARFVLSKT-NESVKEVEERLAEIQVAAGSANAEKNEEKAVWREI--INPSPAVRRMLITGCGIQCFQQITGIDATVYYSPTIFKGAGIKGNNELLAATVAVGFTKTXXXXXXXXXXDKVGRKPLLYVSTIGMTICXXXXXXXXTFLG---NGQLGIALA----------ILSVCGNVAFFSVGIGPVCW 652
            WRI++G+ ++P+      L  +P++PR+ VM+G +  A  VL ++  ++ +E+ ER  E  V    +   KN  + VW  I  ++  P+  R LI GCG+Q  QQ TG ++ +Y+S TIF+  G K ++   A ++ V  T            DK+GR+ +L +   GMT+          FLG   +G + + ++          I+ +    AF+++GIG V W
Sbjct:  245 WRILVGLSLIPTAVQFTCLCFLPDTPRYYVMKGDLARATEVLKRSYTDTSEEIIERKVEELVTLNQSIPGKNVPEKVWNTIKELHTVPSNLRALIIGCGLQAIQQFTGWNSLMYFSGTIFETVGFKNSS---AVSIIVSGTNFIFTLVAFFSIDKIGRRTILLIGLPGMTMALVVCSIAFHFLGIKFDGAVAVVVSSGFSSWGIVIIVFIIVFAAFYALGIGTVPW 467          
BLAST of FC931499 vs. ExPASy Swiss-Prot
Match: IOLT_BACSU (Major myo-inositol transporter iolT OS=Bacillus subtilis GN=iolT PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.602e-21
Identity = 66/216 (30.56%), Postives = 105/216 (48.61%), Query Frame = 2
Query:   14 SYIWRIMLGVGILPSVFIALALFVIPESPRWLVMQGRIDEARFVLSKTNESVKEVEERLAEIQVAAGSANAEKNEEKAVWREIINPSPAVRRMLITGCGIQCFQQITGIDATVYYSPTIFKGAGIKGNNELLAATVAVGFTKTXXXXXXXXXXDKVGRKPLLYVSTIGMTICXXXXXXXXTFLGNGQLGIALAILSVCGNVAFFSVG-IGPVCWVL 658
            S++WR ML +  LP++F+   +  +PESPRWLV +GR ++A  VL K    +++ +   AE+Q    +   E   EKA ++++    P VRR++  G GI   QQITG+++ +YY   I + +G +     L   +A G               +VGR+P+L    IG T            L  G   +   +LS+      F  G I PV W++
Sbjct:  170 SHVWRFMLVIASLPALFLFFGMIRMPESPRWLVSKGRKEDALRVLKK----IRDEKRAAAELQEIEFAFKKEDQLEKATFKDL--SVPWVRRIVFIGLGIAIVQQITGVNSIMYYGTEILRNSGFQ-TEAALIGNIANGVISVLATFVGIWLLGRVGRRPMLMTGLIGTTTALLLIGIFSLVL-EGSPALPYVVLSLTVTFLAFQQGAISPVTWLM 377          
BLAST of FC931499 vs. ExPASy Swiss-Prot
Match: INT1_ARATH (Probable inositol transporter 1 OS=Arabidopsis thaliana GN=INT1 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.602e-21
Identity = 70/216 (32.41%), Postives = 104/216 (48.15%), Query Frame = 2
Query:   23 WRIMLGVGILPSVFIALALFVIPESPRWLVMQGRIDEARFVLSKTNESVKEVEERLAEIQVAAGSANAEKNEEKAVWREIINPSPAVRRMLITGCGIQCFQQITGIDATVYYSPTIFKGAGIKGNNELLAATVAVGFTKTXXXXXXXXXXDKVGRKPL----LYVSTIGMTICXXXXXXXXTFLGNGQLGIALAILSVCGNVAFFSVGIGPVCWVL 658
            WR MLGV  +P+V   + +  +PESPRWL M+ R  EA  VL++T + +  +E+   EI   + +   EK  ++ V    +  S  +R   + G G+Q FQQ TGI+  +YYSPTI + AG   N   L  ++ V               D  GRK L    L+   I + I             +G L   LA+L +   + FF+ G+GPV W +
Sbjct:  190 WRWMLGVSGVPAVIQFILMLFMPESPRWLFMKNRKAEAIQVLARTYD-ISRLED---EIDHLSAAEEEEKQRKRTVGYLDVFRSKELRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFHSNQLALFLSLIVAAMNAAGTVVGIYFIDHCGRKKLALSSLFGVIISLLILSVSFFKQSETSSDGGLYGWLAVLGLALYIVFFAPGMGPVPWTV 401          
BLAST of FC931499 vs. ExPASy Swiss-Prot
Match: INT2_ARATH (Probable inositol transporter 2 OS=Arabidopsis thaliana GN=INT2 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.570e-21
Identity = 55/168 (32.74%), Postives = 90/168 (53.57%), Query Frame = 2
Query:   23 WRIMLGVGILPSVFIALALFVIPESPRWLVMQGRIDEARFVLSKTNESVKEVEERLAEIQVAAGSANAEKNEEKAVWREIINPSPAVRRMLITGCGIQCFQQITGIDATVYYSPTIFKGAGIKGNNELLAATVAVGFTKTXXXXXXXXXXDKVGRKPLLYVSTIGMTI 526
            WR MLG+  +P++   + +F +PESPRWL  +GR +EA+ +L +   S ++VE+ +  ++ +  +   E+   + +    +  +  VRR LI G G+Q FQQ  GI+  +YYSPTI + AG   N   L  ++                 D++GRK LL +S  G+ I
Sbjct:  187 WRWMLGIAGIPALLQFVLMFTLPESPRWLYRKGREEEAKAILRRIY-SAEDVEQEIRALKDSVETEILEEGSSEKINMIKLCKAKTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLAGFASNRTALLLSLVTAGLNAFGSIISIYFIDRIGRKKLLIISLFGVII 353          
BLAST of FC931499 vs. ExPASy Swiss-Prot
Match: ERDL6_ARATH (Sugar transporter ERD6-like 6 OS=Arabidopsis thaliana GN=At1g75220 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.570e-21
Identity = 75/222 (33.78%), Postives = 110/222 (49.55%), Query Frame = 2
Query:   23 WRIMLGVGILPSVFIALALFVIPESPRWLVMQGRIDEARFVLSKTNESVKEVEERLAEIQVAAGSANAEKNEEKAV---WREIINPSPAVRRMLITGCGIQCFQQITGIDATVYYSPTIFKGAGIKGNNELLAATVAVGFTKTXXXXXXXXXXDKVGRKPLLYVSTIGMTI---CXXXXXXXXTFLG-NGQLGIALAILSVCGNVA---FFSVGIGPVCWVL 658
            WRI+  +GILP   +   LF IPESPRWL   G  DE    L        ++   + EI+ +  S + ++N  + V    R    P       L+ G G+   QQ+ GI+  ++YS TIF+ AG+  +N   AAT  VG  +           DK GR+ LL +S++GMTI             F+  +  +   L+ILSV G VA   FFS+G+GP+ W++
Sbjct:  199 WRILAVLGILPCTLLIPGLFFIPESPRWLAKMGMTDEFETSLQVLRGFETDITVEVNEIKRSVAS-STKRNTVRFVDLKRRRYYFP-------LMVGIGLLVLQQLGGINGVLFYSSTIFESAGVTSSN---AATFGVGAIQVVATAISTWLVDKAGRRLLLTISSVGMTISLVIVAAAFYLKEFVSPDSDMYSWLSILSVVGVVAMVVFFSLGMGPIPWLI 409          
BLAST of FC931499 vs. ExPASy Swiss-Prot
Match: ARAE_KLEOX (Arabinose-proton symporter OS=Klebsiella oxytoca GN=araE PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.662e-21
Identity = 73/225 (32.44%), Postives = 104/225 (46.22%), Query Frame = 2
Query:    5 TAGSYI--WRIMLGVGILPSVFIALALFVIPESPRWLVMQGRIDEARFVLSKTNESVKEVEERLAEIQVAAGSANAEKNEEKAVWREIINPSPAVRRMLITGCGIQCFQQITGIDATVYYSPTIFKGAGIKGNNELLAATVAVGFTKTXXXXXXXXXXDKVGRKPLLYVSTIGMTICXXXXXXXXTFLGNGQLGIALAILSV-----CGNVAFFSVGIGPVCWVL 658
            TA SY   WR MLGV  LP+V + + +  +P SPRWL  +GR  EA  VL    ++ ++  + L EI+        E  + K     +   +  VRR +  G  +Q  QQ TG++  +YY+P IFK AG     + + AT+ VG T            DK GRKP L +    M I             NG     L+ LSV     C  +A +++   PV W+L
Sbjct:  169 TAFSYSGNWRAMLGVLALPAVVLIILVIFLPNSPRWLAEKGRHVEAEEVLRMLRDTSEKARDELNEIR--------ESLKLKQGGWALFKVNRNVRRAVFLGMLLQAMQQFTGMNIIMYYAPRIFKMAGFTTTEQQMVATLVVGLTFMFATFIAVFTVDKAGRKPALKIGFSVMAIGTLVLGYCLMQFDNGTASSGLSWLSVGMTMMC--IAGYAMSAAPVVWIL 383          
BLAST of FC931499 vs. ExPASy Swiss-Prot
Match: ARAE_ECOLI (Arabinose-proton symporter OS=Escherichia coli (strain K12) GN=araE PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.089e-21
Identity = 73/225 (32.44%), Postives = 104/225 (46.22%), Query Frame = 2
Query:    5 TAGSYI--WRIMLGVGILPSVFIALALFVIPESPRWLVMQGRIDEARFVLSKTNESVKEVEERLAEIQVAAGSANAEKNEEKAVWREIINPSPAVRRMLITGCGIQCFQQITGIDATVYYSPTIFKGAGIKGNNELLAATVAVGFTKTXXXXXXXXXXDKVGRKPLLYVSTIGMTICXXXXXXXXTFLGNGQLGIALAILSV-----CGNVAFFSVGIGPVCWVL 658
            TA SY   WR MLGV  LP+V + + +  +P SPRWL  +GR  EA  VL    ++ ++  E L EI+        E  + K     +   +  VRR +  G  +Q  QQ TG++  +YY+P IFK AG     + + AT+ VG T            DK GRKP L +    M +             NG     L+ LSV     C  +A +++   PV W+L
Sbjct:  169 TAFSYSGNWRAMLGVLALPAVLLIILVVFLPNSPRWLAEKGRHIEAEEVLRMLRDTSEKAREELNEIR--------ESLKLKQGGWALFKINRNVRRAVFLGMLLQAMQQFTGMNIIMYYAPRIFKMAGFTTTEQQMIATLVVGLTFMFATFIAVFTVDKAGRKPALKIGFSVMALGTLVLGYCLMQFDNGTASSGLSWLSVGMTMMC--IAGYAMSAAPVVWIL 383          
BLAST of FC931499 vs. ExPASy Swiss-Prot
Match: ARAE_ECO57 (Arabinose-proton symporter OS=Escherichia coli O157:H7 GN=araE PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.089e-21
Identity = 73/225 (32.44%), Postives = 104/225 (46.22%), Query Frame = 2
Query:    5 TAGSYI--WRIMLGVGILPSVFIALALFVIPESPRWLVMQGRIDEARFVLSKTNESVKEVEERLAEIQVAAGSANAEKNEEKAVWREIINPSPAVRRMLITGCGIQCFQQITGIDATVYYSPTIFKGAGIKGNNELLAATVAVGFTKTXXXXXXXXXXDKVGRKPLLYVSTIGMTICXXXXXXXXTFLGNGQLGIALAILSV-----CGNVAFFSVGIGPVCWVL 658
            TA SY   WR MLGV  LP+V + + +  +P SPRWL  +GR  EA  VL    ++ ++  E L EI+        E  + K     +   +  VRR +  G  +Q  QQ TG++  +YY+P IFK AG     + + AT+ VG T            DK GRKP L +    M +             NG     L+ LSV     C  +A +++   PV W+L
Sbjct:  169 TAFSYSGNWRAMLGVLALPAVLLIILVVFLPNSPRWLAEKGRHIEAEEVLRMLRDTSEKAREELNEIR--------ESLKLKQGGWALFKINRNVRRAVFLGMLLQAMQQFTGMNIIMYYAPRIFKMAGFTTTEQQMIATLVVGLTFMFATFIAVFTVDKAGRKPALKIGFSVMALGTLVLGYCLMQFDNGTASSGLSWLSVGMTMMC--IAGYAMSAAPVVWIL 383          
BLAST of FC931499 vs. ExPASy Swiss-Prot
Match: GALP_ECOLI (Galactose-proton symporter OS=Escherichia coli (strain K12) GN=galP PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.772e-20
Identity = 70/227 (30.84%), Postives = 108/227 (47.58%), Query Frame = 2
Query:    5 TAGSYI--WRIMLGVGILPSVFIALALFVIPESPRWLVMQGRIDEARFVLSKTNESVKEVEERLAEIQVAAGSANAEKNEEKAVWREIINPSPAVRRMLITGCGIQCFQQITGIDATVYYSPTIFKGAGIKGNNELLAATVAVGFTKTXXXXXXXXXXDKVGRKPLLYVSTIGMTICXXXXXXXXTFLGNG-------QLGIALAILSVCGNVAFFSVGIGPVCWVL 658
            TA SY   WR MLGV I+P++ + + +F +P+SPRW   + R  +A  VL +  ++  E +  L EI+ +       K    A+++E  N     RR +  G  +Q  QQ TG++  +YY+P IF+ AG     E +  TV VG T            D+ GRKP L   T+G  +         T +  G          IA+ ++ + G    F++  GP+ WVL
Sbjct:  162 TAFSYTGAWRWMLGVIIIPAILLLIGVFFLPDSPRWFAAKRRFVDAERVLLRLRDTSAEAKRELDEIRESL----QVKQSGWALFKENSN----FRRAVFLGVLLQVMQQFTGMNVIMYYAPKIFELAGYTNTTEQMWGTVIVGLTNVLATFIAIGLVDRWGRKPTL---TLGFLVMAAGMGVLGTMMHIGIHSPSAQYFAIAMLLMFIVG----FAMSAGPLIWVL 373          
The following BLAST results are available for this feature:
BLAST of FC931499 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 148
Match NameE-valueIdentityDescription
ARAE_BACSU1.449e-2233.80Arabinose-proton symporter OS=Bacillus subtilis GN... [more]
ITR1_YEAST5.508e-2229.65Myo-inositol transporter 1 OS=Saccharomyces cerevi... [more]
IOLT_BACSU1.602e-2130.56Major myo-inositol transporter iolT OS=Bacillus su... [more]
INT1_ARATH1.602e-2132.41Probable inositol transporter 1 OS=Arabidopsis tha... [more]
INT2_ARATH3.570e-2132.74Probable inositol transporter 2 OS=Arabidopsis tha... [more]
ERDL6_ARATH3.570e-2133.78Sugar transporter ERD6-like 6 OS=Arabidopsis thali... [more]
ARAE_KLEOX4.662e-2132.44Arabinose-proton symporter OS=Klebsiella oxytoca G... [more]
ARAE_ECOLI6.089e-2132.44Arabinose-proton symporter OS=Escherichia coli (st... [more]
ARAE_ECO576.089e-2132.44Arabinose-proton symporter OS=Escherichia coli O15... [more]
GALP_ECOLI1.772e-2030.84Galactose-proton symporter OS=Escherichia coli (st... [more]

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Properties
Property NameValue
Genbank descriptionC34105G06EF PostHarvP1 Citrus clementina cDNA clone C34105G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931499 ID=FC931499; Name=FC931499; organism=Citrus clementina; type=EST; length=658bp
CAAGACTGCCGGCTCATATATCTGGCGGATCATGCTTGGTGTGGGAATCC
TTCCATCGGTCTTTATTGCGTTGGCCCTTTTTGTGATCCCTGAATCTCCA
AGGTGGTTGGTGATGCAAGGCAGGATTGATGAAGCAAGATTCGTACTTTC
AAAAACGAATGAGAGTGTTAAAGAAGTGGAGGAAAGGTTGGCAGAAATAC
AAGTAGCTGCTGGGAGTGCTAATGCTGAGAAAAATGAAGAAAAAGCTGTG
TGGCGGGAAATCATAAATCCTTCGCCTGCTGTTAGACGAATGCTGATTAC
AGGTTGTGGAATCCAATGCTTCCAGCAGATTACAGGTATTGATGCAACTG
TCTATTATAGCCCCACTATTTTTAAAGGAGCTGGCATCAAAGGCAATAAT
GAGCTTCTTGCGGCAACCGTTGCTGTTGGGTTTACCAAAACAATTTTCAT
CTTAATAGCTATAATTCTTATCGATAAAGTAGGTAGGAAACCTTTGCTTT
ATGTGAGCACGATCGGCATGACCATTTGCTTGCTTAGTCTAAGCCTTTCT
CTAACATTTTTGGGGAATGGACAACTAGGGATTGCATTGGCAATCTTGTC
AGTTTGTGGCAATGTAGCTTTCTTCTCTGTAGGAATTGGCCCTGTTTGTT
GGGTTTTG
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