FC931501

Overview
NameFC931501
Unique NameFC931501
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11368 contig Ccv1_Contig11368:107..802. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931501 vs. ExPASy Swiss-Prot
Match: HSFA5_ARATH (Heat stress transcription factor A-5 OS=Arabidopsis thaliana GN=HSFA5 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.555e-24
Identity = 46/73 (63.01%), Postives = 61/73 (83.56%), Query Frame = 3
Query:  477 PAPFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQTHTYGFRKIVADKWE 695
            PAPFL+KTY++VDD STD ++SW+ +  +FIVW  A+F++ LLP YFKHNNFSSF+RQ +TYGFRKI  ++WE
Sbjct:   21 PAPFLVKTYEMVDDSSTDQIVSWSANNNSFIVWNHAEFSRLLLPTYFKHNNFSSFIRQLNTYGFRKIDPERWE 93          
BLAST of FC931501 vs. ExPASy Swiss-Prot
Match: HFA1D_ARATH (Heat stress transcription factor A-1d OS=Arabidopsis thaliana GN=HSFA1D PE=2 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 1.906e-23
Identity = 46/75 (61.33%), Postives = 59/75 (78.67%), Query Frame = 3
Query:  471 SVPAPFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQTHTYGFRKIVADKWE 695
            + P PFL KTY +VDD +TD ++SW+ +  +FIVWK  +FA+DLLP  FKHNNFSSFVRQ +TYGFRK+  D+WE
Sbjct:   33 NAPPPFLSKTYDMVDDHNTDSIVSWSANNNSFIVWKPPEFARDLLPKNFKHNNFSSFVRQLNTYGFRKVDPDRWE 107          
BLAST of FC931501 vs. ExPASy Swiss-Prot
Match: HSFA5_ORYSJ (Heat stress transcription factor A-5 OS=Oryza sativa subsp. japonica GN=HSFA5 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.489e-23
Identity = 48/74 (64.86%), Postives = 62/74 (83.78%), Query Frame = 3
Query:  477 PAPFLMKTYQLVDDPSTDDVISWNE-SGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQTHTYGFRKIVADKWE 695
            PAPFL+KTY++VDDPSTD V+SW++ S A+F+VW   +FA  LLP YFKH+NFSSF+RQ +TYGFRKI  ++WE
Sbjct:   19 PAPFLLKTYEMVDDPSTDAVVSWSDASDASFVVWNHPEFAARLLPAYFKHSNFSSFIRQLNTYGFRKIDPERWE 92          
BLAST of FC931501 vs. ExPASy Swiss-Prot
Match: HFA7A_ARATH (Heat stress transcription factor A-7a OS=Arabidopsis thaliana GN=HSFA7A PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.242e-23
Identity = 43/75 (57.33%), Postives = 59/75 (78.67%), Query Frame = 3
Query:  471 SVPAPFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQTHTYGFRKIVADKWE 695
            + P PFL KT+++VDDP+TD ++SWN  G +F+VW    F+  LLP +FKH+NFSSF+RQ +TYGFRKI A++WE
Sbjct:   25 NAPPPFLTKTFEMVDDPNTDHIVSWNRGGTSFVVWDLHSFSTILLPRHFKHSNFSSFIRQLNTYGFRKIEAERWE 99          
BLAST of FC931501 vs. ExPASy Swiss-Prot
Match: HFA1B_ARATH (Heat stress transcription factor A-1b OS=Arabidopsis thaliana GN=HSFA1B PE=2 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 7.242e-23
Identity = 47/75 (62.67%), Postives = 59/75 (78.67%), Query Frame = 3
Query:  471 SVPAPFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQTHTYGFRKIVADKWE 695
            SVP PFL KTY +VDDP T++V+SW+    +F+VW   +F+K LLP YFKHNNFSSFVRQ +TYGFRK+  D+WE
Sbjct:   24 SVP-PFLSKTYDMVDDPLTNEVVSWSSGNNSFVVWSAPEFSKVLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWE 97          
BLAST of FC931501 vs. ExPASy Swiss-Prot
Match: HFA7B_ARATH (Heat stress transcription factor A-7b OS=Arabidopsis thaliana GN=HSFA7B PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.459e-23
Identity = 44/77 (57.14%), Postives = 60/77 (77.92%), Query Frame = 3
Query:  465 QRSVPAPFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQTHTYGFRKIVADKWE 695
            Q + P+PFL KT+++V DP+T+ ++SWN  G +F+VW    F+  +LP YFKHNNFSSFVRQ +TYGFRKI A++WE
Sbjct:   22 QEAGPSPFLTKTFEMVGDPNTNHIVSWNRGGISFVVWDPHSFSATILPLYFKHNNFSSFVRQLNTYGFRKIEAERWE 98          
BLAST of FC931501 vs. ExPASy Swiss-Prot
Match: HFA4A_ARATH (Heat stress transcription factor A-4a OS=Arabidopsis thaliana GN=HSFA4A PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.459e-23
Identity = 45/83 (54.22%), Postives = 64/83 (77.11%), Query Frame = 3
Query:  447 NRERMAQRSVPAPFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQTHTYGFRKIVADKWE 695
            N   ++  S+P PFL KTY++VDD S+D ++SW++S  +FIVW   +F++DLLP +FKHNNFSSF+RQ +TYGFRK   ++WE
Sbjct:    4 NNHGVSSSSLP-PFLTKTYEMVDDSSSDSIVSWSQSNKSFIVWNPPEFSRDLLPRFFKHNNFSSFIRQLNTYGFRKADPEQWE 85          
BLAST of FC931501 vs. ExPASy Swiss-Prot
Match: HFA2A_ORYSJ (Heat stress transcription factor A-2a OS=Oryza sativa subsp. japonica GN=HSFA2A PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.235e-22
Identity = 47/73 (64.38%), Postives = 56/73 (76.71%), Query Frame = 3
Query:  477 PAPFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQTHTYGFRKIVADKWE 695
            P PFL KTY++VDDP TD VISW  +G +F+VW    FA  LLP YFKH+NFSSFVRQ +TYGFRK+  D+WE
Sbjct:   51 PPPFLCKTYEVVDDPGTDTVISWGFAGNSFVVWDANAFAAVLLPRYFKHSNFSSFVRQLNTYGFRKVDPDRWE 123          
BLAST of FC931501 vs. ExPASy Swiss-Prot
Match: HSFA3_ARATH (Heat stress transcription factor A-3 OS=Arabidopsis thaliana GN=HSFA3 PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.107e-22
Identity = 47/71 (66.20%), Postives = 56/71 (78.87%), Query Frame = 3
Query:  483 PFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQTHTYGFRKIVADKWE 695
            PFL KT+ LVDDP+ D VISW  +GA+F+VW   +FA+ +LP  FKHNNFSSFVRQ +TYGFRKI  DKWE
Sbjct:   55 PFLSKTFDLVDDPTLDPVISWGLTGASFVVWDPLEFARIILPRNFKHNNFSSFVRQLNTYGFRKIDTDKWE 125          
BLAST of FC931501 vs. ExPASy Swiss-Prot
Match: HSFA3_ORYSJ (Heat stress transcription factor A-3 OS=Oryza sativa subsp. japonica GN=HSFA3 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.752e-22
Identity = 47/81 (58.02%), Postives = 60/81 (74.07%), Query Frame = 3
Query:  453 ERMAQRSVPAPFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQTHTYGFRKIVADKWE 695
            E + Q     PFL KTY LV +P  D VISW  +G +F+VW  + FA+D+LP++FKHNNFSSFVRQ +TYGFRK+ AD+WE
Sbjct:   57 EALLQGPQLPPFLSKTYDLVCEPELDGVISWGHAGNSFVVWDPSAFARDVLPHHFKHNNFSSFVRQLNTYGFRKVHADRWE 137          
The following BLAST results are available for this feature:
BLAST of FC931501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
HSFA5_ARATH8.555e-2463.01Heat stress transcription factor A-5 OS=Arabidopsi... [more]
HFA1D_ARATH1.906e-2361.33Heat stress transcription factor A-1d OS=Arabidops... [more]
HSFA5_ORYSJ2.489e-2364.86Heat stress transcription factor A-5 OS=Oryza sati... [more]
HFA7A_ARATH7.242e-2357.33Heat stress transcription factor A-7a OS=Arabidops... [more]
HFA1B_ARATH7.242e-2362.67Heat stress transcription factor A-1b OS=Arabidops... [more]
HFA7B_ARATH9.459e-2357.14Heat stress transcription factor A-7b OS=Arabidops... [more]
HFA4A_ARATH9.459e-2354.22Heat stress transcription factor A-4a OS=Arabidops... [more]
HFA2A_ORYSJ1.235e-2264.38Heat stress transcription factor A-2a OS=Oryza sat... [more]
HSFA3_ARATH2.107e-2266.20Heat stress transcription factor A-3 OS=Arabidopsi... [more]
HSFA3_ORYSJ2.752e-2258.02Heat stress transcription factor A-3 OS=Oryza sati... [more]

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Properties
Property NameValue
Genbank descriptionC34105G08EF PostHarvP1 Citrus clementina cDNA clone C34105G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931501 ID=FC931501; Name=FC931501; organism=Citrus clementina; type=EST; length=696bp
GTCTCTTTTATTTAATTTTTGTTTGATCGTTTATTAATTTATTTTGTTGC
GTTTCTCAAAATTTCTAGAACCCGCGTCACTTTCCTTTCCAATCTCTCTT
TATAAGAGACCCGTGCAAGAATTAACAAAGAGAACGTTTCGAATATTTTT
CAGAGAAGTTATGGTCTTTGCTCATCTAGCCGAAGGACTGGTTAGATTGG
CGATTGCTCATGGAAGCACATAGGAGCAAACGTAGTGGCAATATTTTTCT
TTCTGGGTTTTATTGCTGGGGCTGGGAATTCTTGACTGCCCTCTTGCTCT
TTAGTTGCTCCGTCTAGACCCCAAAAATATATTCATCTCACAAATTAAAG
TAGTAGGTGTTAGAGGGTTTCGAGATTTTCATTCAAGTGTAATTATTTTT
GTTTTTCTCAAAAAGGGTAGTGATTTTGGGGGGTTGGTGAGGGGCAAATC
GGGAAAGAATGGCGCAGAGGTCGGTTCCGGCGCCGTTCCTGATGAAGACG
TACCAGTTGGTGGATGATCCGAGCACTGATGATGTGATATCGTGGAATGA
AAGTGGCGCCACTTTTATTGTCTGGAAAACTGCTGATTTTGCCAAGGATC
TGCTGCCTAATTACTTCAAGCACAACAATTTTTCAAGCTTTGTCCGCCAA
ACTCATACTTATGGATTTCGGAAAATCGTGGCCGACAAATGGGAAT
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