FC931505

Overview
NameFC931505
Unique NameFC931505
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length519
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: G3P3_ECOLI (Putative glyceraldehyde-3-phosphate dehydrogenase C OS=Escherichia coli (strain K12) GN=gapC PE=5 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 3.941e-15
Identity = 48/136 (35.29%), Postives = 75/136 (55.15%), Query Frame = 2
Query:   95 KIGINGFGRIGRLV-ARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNE 499
            K+GINGFGRIGRLV  R+   + ++++VA+ND   S   + Y+ K+DS +G +  +    +D  +L+   K +AV+  +  + IPW   GAE +VE TG +T               V+ISAP+ +    V  VN+
Sbjct:    3 KVGINGFGRIGRLVLGRLLEVKSNIDVVAIND-LTSPKILAYLLKHDSNYGPFPWSVDFTED--SLIVDGKSIAVYAEKEAKNIPWKAKGAEIIVECTGFYTSAEKSQAHLDAGAKKVLISAPAGEMKTIVYNVND 135          
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: G3PA_CHOCR (Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic OS=Chondrus crispus GN=GAPA PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 5.147e-15
Identity = 51/144 (35.42%), Postives = 76/144 (52.78%), Query Frame = 2
Query:   89 KIKIGINGFGRIGRLVARVALQRDD--VELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPM--FVVGVNEKEY 508
            K+++ INGFGRIGR   R    R D  +E+V +ND        +++ KYDS+ G +  +    +D  T+    K + +   RNP ++PW +   + VVE+TGVF                V+I+AP K   +  FVVGVNEK+Y
Sbjct:   78 KVRVAINGFGRIGRNFIRCWAGRSDSNMEVVCINDTS-GVKTASHLLKYDSILGTFDADVSAGED--TISVNGKTIKIVSNRNPLQLPWKEMNIDIVVEATGVFVDAPGAGKHIEAGAKKVLITAPGKGDGIGTFVVGVNEKDY 218          
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: G3PA_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPA PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 6.722e-15
Identity = 52/148 (35.14%), Postives = 75/148 (50.68%), Query Frame = 2
Query:   83 DKKIKIGINGFGRIGRLVARVALQRDD--VELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSK-DAPMFVVGVNEKEYKPE 517
            + K+K+ INGFGRIGR   R    R D  ++++A+ND        +++ KYDS  G +  +   V  +   + G K + V   RNP  +PW   G + V+E TGVF                V+I+AP K D P +VVGVN   Y P+
Sbjct:   55 EAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVIAINDTG-GVKQASHLLKYDSTLGIFDADVKPVGTDGISVDG-KVIQVVSDRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADLYNPD 200          
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: G3PC_RALEH (Glyceraldehyde-3-phosphate dehydrogenase, chromosomal OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbGC PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 8.779e-15
Identity = 52/140 (37.14%), Postives = 78/140 (55.71%), Query Frame = 2
Query:   92 IKIGINGFGRIGRLVARVALQ---RDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAP-SKDAPMFVV-GVN 496
            IK+ ING+GRIGR V R   +   R D+E+VA+ND   +     ++ +YD+VHG++   E+ V  +   + G++ + V   RNP E+PW + G + V+E TG+FT               V+ISAP  KD    +V GVN
Sbjct:    3 IKVAINGYGRIGRNVLRAHYEGGKRHDIEIVAIND-LGNAATNAHLTQYDTVHGRFP-GEVSVDGDAFRVNGDR-IRVLAQRNPAELPWGELGVDVVMECTGLFTSKEKASAHLRGGAKKVIISAPGGKDVDATIVYGVN 139          
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: G3P_MYCTU (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycobacterium tuberculosis GN=gap PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.147e-14
Identity = 49/146 (33.56%), Postives = 77/146 (52.74%), Query Frame = 2
Query:   92 IKIGINGFGRIGRLVARVALQRD-----DVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRN-PEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPM-FVVGVNEKEY 508
            +++GINGFGRIGR   R  L +      DVE+VA ND       + ++ K+DS+ G+    ++ ++ + T++ G   +     R  P  +PW   G + VVESTG+FT               V+ISAP+ D  +  V+GVN+ +Y
Sbjct:    3 VRVGINGFGRIGRNFYRALLAQQEQGTADVEVVAAND-ITDNSTLAHLLKFDSILGRLPC-DVGLEGDDTIVVGRAKIKALAVREGPAALPWGDLGVDVVVESTGLFTNAAKAKGHLDAGAKKVIISAPATDEDITIVLGVNDDKY 146          
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: G3P_MYCBO (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycobacterium bovis GN=gap PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.147e-14
Identity = 49/146 (33.56%), Postives = 77/146 (52.74%), Query Frame = 2
Query:   92 IKIGINGFGRIGRLVARVALQRD-----DVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRN-PEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPM-FVVGVNEKEY 508
            +++GINGFGRIGR   R  L +      DVE+VA ND       + ++ K+DS+ G+    ++ ++ + T++ G   +     R  P  +PW   G + VVESTG+FT               V+ISAP+ D  +  V+GVN+ +Y
Sbjct:    3 VRVGINGFGRIGRNFYRALLAQQEQGTADVEVVAAND-ITDNSTLAHLLKFDSILGRLPC-DVGLEGDDTIVVGRAKIKALAVREGPAALPWGDLGVDVVVESTGLFTNAAKAKGHLDAGAKKVIISAPATDEDITIVLGVNDDKY 146          
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: G3PP_RALEH (Glyceraldehyde-3-phosphate dehydrogenase, plasmid OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbGP PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.497e-14
Identity = 52/140 (37.14%), Postives = 78/140 (55.71%), Query Frame = 2
Query:   92 IKIGINGFGRIGRLVARVALQ---RDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAP-SKDAPMFVV-GVN 496
            IK+ ING+GRIGR V R   +   R D+E+VA+ND   +     ++ +YD+VHG++   E+ V  +   + G++ + V   RNP E+PW + G + V+E TG+FT               V+ISAP  KD    +V GVN
Sbjct:    3 IKVAINGYGRIGRNVLRAHYEGGKRHDLEIVAIND-LGNAATNAHLTQYDTVHGRFP-GEVSVDGDAFRVNGDR-IRVLAQRNPAELPWGELGVDVVMECTGLFTSKEKASAHLKGGAKKVIISAPGGKDVDATIVYGVN 139          
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: G3P2_RHOSH (Glyceraldehyde-3-phosphate dehydrogenase B OS=Rhodobacter sphaeroides GN=gapB PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.497e-14
Identity = 50/138 (36.23%), Postives = 73/138 (52.90%), Query Frame = 2
Query:   92 IKIGINGFGRIGRLVARVALQ--RDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVV-GVN 496
            I++ INGFGRIGR V R  ++  R D+E+VA+ND     +   ++ ++DSVHG++        D   +  G  P+ V   RNP E+PWA  G +  +E TG+FT               V++SAP   A   +V GVN
Sbjct:    3 IRVAINGFGRIGRNVLRAIVESGRTDIEVVAIND-LGQVETNAHLLRFDSVHGRFPAKVTSGDD--WIDVGRGPIKVTAIRNPAELPWA--GVDMAMECTGIFTTKEKAAAHLQNGAKRVLVSAPCDGADRTIVYGVN 135          
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: G3P_LACDE (Glyceraldehyde-3-phosphate dehydrogenase OS=Lactobacillus delbrueckii subsp. bulgaricus GN=gap PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.956e-14
Identity = 50/142 (35.21%), Postives = 73/142 (51.41%), Query Frame = 2
Query:   92 IKIGINGFGRIGRLVAR----VALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKT-GAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPS-KDAPMFVVGVNE 499
            +KIGINGFGRIGRL  R    +  +  D+E+VA+ND   +   + ++ KYDS HG + H     +D  +L+   K   V+     + IPW K  G ++V+E TG +T               V+ISAP+  D    V  VN+
Sbjct:    3 VKIGINGFGRIGRLAFRRIMDLGEETKDIEVVAIND-LTTPAMLAHLLKYDSTHGTFDHEVSATED--SLVVDGKKYRVYAEPQAQNIPWVKNDGVDFVLECTGFYTSKAKSQAHLDAGAKRVLISAPAGNDLKTIVYSVNQ 141          
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: G3PA_PEA (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Pisum sativum GN=GAPA PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 2.554e-14
Identity = 51/144 (35.42%), Postives = 74/144 (51.39%), Query Frame = 2
Query:   86 KKIKIGINGFGRIGRLVARVALQRDD--VELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSK-DAPMFVVGVNEKEY 508
            K++K+ INGFGRIGR   R    R D  ++++A+ND        +++ KYDS  G +  +   V  +   + G K + V   RNP  +PW + G + V+E TGVF                V+I+AP K D P +VVGVN   Y
Sbjct:   69 KQLKVAINGFGRIGRNFLRCWHGRKDSPLDVIAINDTG-GVKQASHLLKYDSTLGIFDADVKPVGTDGISVDG-KVIKVVSDRNPANLPWKELGIDLVIEGTGVFVDREGAGRHITAGAKKVLITAPGKGDIPTYVVGVNADAY 210          
The following BLAST results are available for this feature:
BLAST of FC931505 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 279
Match NameE-valueIdentityDescription
G3P3_ECOLI3.941e-1535.29Putative glyceraldehyde-3-phosphate dehydrogenase ... [more]
G3PA_CHOCR5.147e-1535.42Glyceraldehyde-3-phosphate dehydrogenase, chloropl... [more]
G3PA_TOBAC6.722e-1535.14Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3PC_RALEH8.779e-1537.14Glyceraldehyde-3-phosphate dehydrogenase, chromoso... [more]
G3P_MYCTU1.147e-1433.56Glyceraldehyde-3-phosphate dehydrogenase OS=Mycoba... [more]
G3P_MYCBO1.147e-1433.56Glyceraldehyde-3-phosphate dehydrogenase OS=Mycoba... [more]
G3PP_RALEH1.497e-1437.14Glyceraldehyde-3-phosphate dehydrogenase, plasmid ... [more]
G3P2_RHOSH1.497e-1436.23Glyceraldehyde-3-phosphate dehydrogenase B OS=Rhod... [more]
G3P_LACDE1.956e-1435.21Glyceraldehyde-3-phosphate dehydrogenase OS=Lactob... [more]
G3PA_PEA2.554e-1435.42Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]

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Properties
Property NameValue
Genbank descriptionC34105G12EF PostHarvP1 Citrus clementina cDNA clone C34105G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931505 ID=FC931505; Name=FC931505; organism=Citrus clementina; type=EST; length=519bp
GAAAAACAACGCGCCCAACCAAAATTGCAGCGTTAAACAAACCTTCACTA
CTTTCTCATTTTCGATAATATCAATGGCCGGAGACAAGAAGATTAAGATC
GGAATCAACGGTTTCGGAAGGATCGGCCGTTTGGTTGCGAGAGTCGCACT
CCAGAGGGATGATGTGGAGCTGGTGGCTGTCAACGATCCTTTCATCTCCA
CTGATTACATGACATACATGTTTAAGTACGATAGTGTTCACGGTCAGTGG
AAGCACAACGAGTTGAAGGTCAAGGACGAGAAGACCCTCCTCTTCGGTGA
GAAGCCAGTCGCTGTTTTCGGATTCAGGAACCCAGAGGAGATCCCATGGG
CAAAGACTGGAGCCGAGTATGTTGTGGAATCAACTGGAGTGTTCACTGAC
AAGGACAAGGCTGCTGCTCACTTGAAGGGTGGTGCCAAGAAGGTCGTTAT
CTCCGCCCCTAGCAAGGATGCTCCCATGTTTGTTGTGGGCGTCAACGAGA
AAGAATACAAGCCAGAGCT
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