FC931505

Overview
NameFC931505
Unique NameFC931505
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length519
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15341 contig Ccv1_Contig15341:1..519. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: E4PD_ECO81 (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli O81 (strain ED1a) GN=epd PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.509e-11
Identity = 44/147 (29.93%), Postives = 75/147 (51.02%), Query Frame = 2
Query:   92 IKIGINGFGRIGRLVARVALQ---RDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAP-SKDAPMFVV-GVNEKEYKPE 517
            +++ INGFGRIGR V R   +   R ++ +VA+N+       M ++ KYD+ HG++     + +D+  L  G+  + V   R+ + +PW + G + V++ TGV+                V+ S P S D    VV GVN+ + + E
Sbjct:    3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDTTVVYGVNQDQLRAE 146          
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: E4PD_ECO5E (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=epd PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.509e-11
Identity = 44/147 (29.93%), Postives = 75/147 (51.02%), Query Frame = 2
Query:   92 IKIGINGFGRIGRLVARVALQ---RDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAP-SKDAPMFVV-GVNEKEYKPE 517
            +++ INGFGRIGR V R   +   R ++ +VA+N+       M ++ KYD+ HG++     + +D+  L  G+  + V   R+ + +PW + G + V++ TGV+                V+ S P S D    VV GVN+ + + E
Sbjct:    3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAE 146          
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: E4PD_ECO57 (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli O157:H7 GN=epd PE=3 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 4.509e-11
Identity = 44/147 (29.93%), Postives = 75/147 (51.02%), Query Frame = 2
Query:   92 IKIGINGFGRIGRLVARVALQ---RDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAP-SKDAPMFVV-GVNEKEYKPE 517
            +++ INGFGRIGR V R   +   R ++ +VA+N+       M ++ KYD+ HG++     + +D+  L  G+  + V   R+ + +PW + G + V++ TGV+                V+ S P S D    VV GVN+ + + E
Sbjct:    3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAE 146          
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: E4PD_ECO55 (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli (strain 55989 / EAEC) GN=epd PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.509e-11
Identity = 44/147 (29.93%), Postives = 75/147 (51.02%), Query Frame = 2
Query:   92 IKIGINGFGRIGRLVARVALQ---RDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAP-SKDAPMFVV-GVNEKEYKPE 517
            +++ INGFGRIGR V R   +   R ++ +VA+N+       M ++ KYD+ HG++     + +D+  L  G+  + V   R+ + +PW + G + V++ TGV+                V+ S P S D    VV GVN+ + + E
Sbjct:    3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAE 146          
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: E4PD_ECO45 (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=epd PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.509e-11
Identity = 44/147 (29.93%), Postives = 75/147 (51.02%), Query Frame = 2
Query:   92 IKIGINGFGRIGRLVARVALQ---RDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAP-SKDAPMFVV-GVNEKEYKPE 517
            +++ INGFGRIGR V R   +   R ++ +VA+N+       M ++ KYD+ HG++     + +D+  L  G+  + V   R+ + +PW + G + V++ TGV+                V+ S P S D    VV GVN+ + + E
Sbjct:    3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDTTVVYGVNQDQLRAE 146          
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: E4PD_ECO27 (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=epd PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.509e-11
Identity = 44/147 (29.93%), Postives = 75/147 (51.02%), Query Frame = 2
Query:   92 IKIGINGFGRIGRLVARVALQ---RDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAP-SKDAPMFVV-GVNEKEYKPE 517
            +++ INGFGRIGR V R   +   R ++ +VA+N+       M ++ KYD+ HG++     + +D+  L  G+  + V   R+ + +PW + G + V++ TGV+                V+ S P S D    VV GVN+ + + E
Sbjct:    3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDTTVVYGVNQDQLRAE 146          
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: E4PD_ECO24 (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=epd PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.509e-11
Identity = 44/147 (29.93%), Postives = 75/147 (51.02%), Query Frame = 2
Query:   92 IKIGINGFGRIGRLVARVALQ---RDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAP-SKDAPMFVV-GVNEKEYKPE 517
            +++ INGFGRIGR V R   +   R ++ +VA+N+       M ++ KYD+ HG++     + +D+  L  G+  + V   R+ + +PW + G + V++ TGV+                V+ S P S D    VV GVN+ + + E
Sbjct:    3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAE 146          
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: E4PD_SALG2 (D-erythrose-4-phosphate dehydrogenase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=epd PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.888e-11
Identity = 44/148 (29.73%), Postives = 74/148 (50.00%), Query Frame = 2
Query:   92 IKIGINGFGRIGRLVARVALQ---RDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLF-GEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDA--PMFVVGVNEKEYKPE 517
            ++I INGFGRIGR V R   +   R ++ +VA+N+       M ++ KYD+ HG++     +V+ E+  LF G+  + +   R   ++PW + G + V++ TGV+                V+ S P  +      V GVN+ E + E
Sbjct:    3 VRIAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRF---AWEVRHEREQLFVGDDVIRILHERTLADLPWRELGVDVVLDCTGVYGNREHGEAHIAAGAKKVLFSHPGSNGLDATVVFGVNQNELRAE 146          
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: E4PD_ESCF3 (D-erythrose-4-phosphate dehydrogenase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=epd PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.888e-11
Identity = 44/147 (29.93%), Postives = 75/147 (51.02%), Query Frame = 2
Query:   92 IKIGINGFGRIGRLVARVALQ---RDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAP-SKDAPMFVV-GVNEKEYKPE 517
            +++ INGFGRIGR V R   +   R ++ +VA+N+       M ++ KYD+ HG++     + +D+  L  G+  + V   R+ + +PW + G + V++ TGV+                V+ S P S D    VV GVN+ + + E
Sbjct:    3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LCVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAE 146          
The following BLAST results are available for this feature:
BLAST of FC931505 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 279
Match NameE-valueIdentityDescription
E4PD_ECO814.509e-1129.93D-erythrose-4-phosphate dehydrogenase OS=Escherich... [more]
E4PD_ECO5E4.509e-1129.93D-erythrose-4-phosphate dehydrogenase OS=Escherich... [more]
E4PD_ECO574.509e-1129.93D-erythrose-4-phosphate dehydrogenase OS=Escherich... [more]
E4PD_ECO554.509e-1129.93D-erythrose-4-phosphate dehydrogenase OS=Escherich... [more]
E4PD_ECO454.509e-1129.93D-erythrose-4-phosphate dehydrogenase OS=Escherich... [more]
E4PD_ECO274.509e-1129.93D-erythrose-4-phosphate dehydrogenase OS=Escherich... [more]
E4PD_ECO244.509e-1129.93D-erythrose-4-phosphate dehydrogenase OS=Escherich... [more]
E4PD_SALG25.888e-1129.73D-erythrose-4-phosphate dehydrogenase OS=Salmonell... [more]
E4PD_ESCF35.888e-1129.93D-erythrose-4-phosphate dehydrogenase OS=Escherich... [more]

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Properties
Property NameValue
Genbank descriptionC34105G12EF PostHarvP1 Citrus clementina cDNA clone C34105G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931505 ID=FC931505; Name=FC931505; organism=Citrus clementina; type=EST; length=519bp
GAAAAACAACGCGCCCAACCAAAATTGCAGCGTTAAACAAACCTTCACTA
CTTTCTCATTTTCGATAATATCAATGGCCGGAGACAAGAAGATTAAGATC
GGAATCAACGGTTTCGGAAGGATCGGCCGTTTGGTTGCGAGAGTCGCACT
CCAGAGGGATGATGTGGAGCTGGTGGCTGTCAACGATCCTTTCATCTCCA
CTGATTACATGACATACATGTTTAAGTACGATAGTGTTCACGGTCAGTGG
AAGCACAACGAGTTGAAGGTCAAGGACGAGAAGACCCTCCTCTTCGGTGA
GAAGCCAGTCGCTGTTTTCGGATTCAGGAACCCAGAGGAGATCCCATGGG
CAAAGACTGGAGCCGAGTATGTTGTGGAATCAACTGGAGTGTTCACTGAC
AAGGACAAGGCTGCTGCTCACTTGAAGGGTGGTGCCAAGAAGGTCGTTAT
CTCCGCCCCTAGCAAGGATGCTCCCATGTTTGTTGTGGGCGTCAACGAGA
AAGAATACAAGCCAGAGCT
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