FC931505
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: E4PD_ECO81 (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli O81 (strain ED1a) GN=epd PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.509e-11 Identity = 44/147 (29.93%), Postives = 75/147 (51.02%), Query Frame = 2 Query: 92 IKIGINGFGRIGRLVARVALQ---RDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAP-SKDAPMFVV-GVNEKEYKPE 517 +++ INGFGRIGR V R + R ++ +VA+N+ M ++ KYD+ HG++ + +D+ L G+ + V R+ + +PW + G + V++ TGV+ V+ S P S D VV GVN+ + + E Sbjct: 3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDTTVVYGVNQDQLRAE 146
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: E4PD_ECO5E (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=epd PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.509e-11 Identity = 44/147 (29.93%), Postives = 75/147 (51.02%), Query Frame = 2 Query: 92 IKIGINGFGRIGRLVARVALQ---RDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAP-SKDAPMFVV-GVNEKEYKPE 517 +++ INGFGRIGR V R + R ++ +VA+N+ M ++ KYD+ HG++ + +D+ L G+ + V R+ + +PW + G + V++ TGV+ V+ S P S D VV GVN+ + + E Sbjct: 3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAE 146
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: E4PD_ECO57 (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli O157:H7 GN=epd PE=3 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 4.509e-11 Identity = 44/147 (29.93%), Postives = 75/147 (51.02%), Query Frame = 2 Query: 92 IKIGINGFGRIGRLVARVALQ---RDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAP-SKDAPMFVV-GVNEKEYKPE 517 +++ INGFGRIGR V R + R ++ +VA+N+ M ++ KYD+ HG++ + +D+ L G+ + V R+ + +PW + G + V++ TGV+ V+ S P S D VV GVN+ + + E Sbjct: 3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAE 146
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: E4PD_ECO55 (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli (strain 55989 / EAEC) GN=epd PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.509e-11 Identity = 44/147 (29.93%), Postives = 75/147 (51.02%), Query Frame = 2 Query: 92 IKIGINGFGRIGRLVARVALQ---RDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAP-SKDAPMFVV-GVNEKEYKPE 517 +++ INGFGRIGR V R + R ++ +VA+N+ M ++ KYD+ HG++ + +D+ L G+ + V R+ + +PW + G + V++ TGV+ V+ S P S D VV GVN+ + + E Sbjct: 3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAE 146
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: E4PD_ECO45 (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=epd PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.509e-11 Identity = 44/147 (29.93%), Postives = 75/147 (51.02%), Query Frame = 2 Query: 92 IKIGINGFGRIGRLVARVALQ---RDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAP-SKDAPMFVV-GVNEKEYKPE 517 +++ INGFGRIGR V R + R ++ +VA+N+ M ++ KYD+ HG++ + +D+ L G+ + V R+ + +PW + G + V++ TGV+ V+ S P S D VV GVN+ + + E Sbjct: 3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDTTVVYGVNQDQLRAE 146
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: E4PD_ECO27 (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=epd PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.509e-11 Identity = 44/147 (29.93%), Postives = 75/147 (51.02%), Query Frame = 2 Query: 92 IKIGINGFGRIGRLVARVALQ---RDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAP-SKDAPMFVV-GVNEKEYKPE 517 +++ INGFGRIGR V R + R ++ +VA+N+ M ++ KYD+ HG++ + +D+ L G+ + V R+ + +PW + G + V++ TGV+ V+ S P S D VV GVN+ + + E Sbjct: 3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDTTVVYGVNQDQLRAE 146
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: E4PD_ECO24 (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=epd PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.509e-11 Identity = 44/147 (29.93%), Postives = 75/147 (51.02%), Query Frame = 2 Query: 92 IKIGINGFGRIGRLVARVALQ---RDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAP-SKDAPMFVV-GVNEKEYKPE 517 +++ INGFGRIGR V R + R ++ +VA+N+ M ++ KYD+ HG++ + +D+ L G+ + V R+ + +PW + G + V++ TGV+ V+ S P S D VV GVN+ + + E Sbjct: 3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAE 146
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: E4PD_SALG2 (D-erythrose-4-phosphate dehydrogenase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=epd PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 5.888e-11 Identity = 44/148 (29.73%), Postives = 74/148 (50.00%), Query Frame = 2 Query: 92 IKIGINGFGRIGRLVARVALQ---RDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLF-GEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDA--PMFVVGVNEKEYKPE 517 ++I INGFGRIGR V R + R ++ +VA+N+ M ++ KYD+ HG++ +V+ E+ LF G+ + + R ++PW + G + V++ TGV+ V+ S P + V GVN+ E + E Sbjct: 3 VRIAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRF---AWEVRHEREQLFVGDDVIRILHERTLADLPWRELGVDVVLDCTGVYGNREHGEAHIAAGAKKVLFSHPGSNGLDATVVFGVNQNELRAE 146
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: E4PD_ESCF3 (D-erythrose-4-phosphate dehydrogenase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=epd PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 5.888e-11 Identity = 44/147 (29.93%), Postives = 75/147 (51.02%), Query Frame = 2 Query: 92 IKIGINGFGRIGRLVARVALQ---RDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAP-SKDAPMFVV-GVNEKEYKPE 517 +++ INGFGRIGR V R + R ++ +VA+N+ M ++ KYD+ HG++ + +D+ L G+ + V R+ + +PW + G + V++ TGV+ V+ S P S D VV GVN+ + + E Sbjct: 3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LCVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAE 146 The following BLAST results are available for this feature:
BLAST of FC931505 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 279
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931505 ID=FC931505; Name=FC931505; organism=Citrus clementina; type=EST; length=519bpback to top |