FC931505

Overview
NameFC931505
Unique NameFC931505
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length519
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: G3P_PHACH (Glyceraldehyde-3-phosphate dehydrogenase OS=Phanerochaete chrysosporium GN=GPD PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 9.022e-36
Identity = 77/139 (55.40%), Postives = 93/139 (66.91%), Query Frame = 2
Query:   92 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 508
            +K GINGFGRIGR+V R AL   D+++VAVNDPFI  +YM YMFKYDSVHG++K   ++ KD K  + G KP+ VF  ++P  IPW   GAEY+VESTGVFT               V+ISAPS DAPMFV GVN   Y
Sbjct:    3 VKAGINGFGRIGRIVLRNALLHGDIDVVAVNDPFIDLEYMVYMFKYDSVHGRFK-GSVEAKDGKLYVEG-KPIHVFAEKDPANIPWGSVGAEYIVESTGVFTTTEKASAHLKGVCKKVIISAPSADAPMFVCGVNLDAY 139          
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: G3P2_TRIKO (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Trichoderma koningii GN=gpd2 PE=1 SV=3)

HSP 1 Score: 148.673 bits (374), Expect = 1.539e-35
Identity = 78/139 (56.12%), Postives = 96/139 (69.06%), Query Frame = 2
Query:   92 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 508
            IK+GINGFGRIGR+V R A++  D+E+VAVNDPFI T Y  YM KYDS HG +K  E++V D K L+   K V  +  RNP +I W++TGAEYVVESTGVFT               V+ISAPS DAPM+V+GVNE +Y
Sbjct:    4 IKVGINGFGRIGRIVFRNAVEHPDIEVVAVNDPFIETTYAAYMLKYDSSHGLFK-GEVEV-DGKDLVVNGKKVRFYTERNPADIKWSETGAEYVVESTGVFTTTEKAKAHLVGGAKKVIISAPSADAPMYVMGVNESDY 140          
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: G3P_PONAB (Glyceraldehyde-3-phosphate dehydrogenase OS=Pongo abelii GN=GAPDH PE=2 SV=3)

HSP 1 Score: 148.288 bits (373), Expect = 2.010e-35
Identity = 73/140 (52.14%), Postives = 95/140 (67.86%), Query Frame = 2
Query:   89 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 508
            K+K+GINGFGRIGRLV R A     V++VA+NDPFI  +YM YMF+YDS HG++ H  +K ++ K ++ G  P+ +F  R+P +I W   GAEYVVESTGVFT               V+ISAPS DAPMFV+GVN ++Y
Sbjct:    3 KVKVGINGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKF-HGTVKAENGKLVING-NPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSADAPMFVMGVNHEKY 140          
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: G3P_PLESA (Glyceraldehyde-3-phosphate dehydrogenase OS=Pleurotus sajor-caju GN=GPD PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.625e-35
Identity = 77/142 (54.23%), Postives = 97/142 (68.31%), Query Frame = 2
Query:   92 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 517
            + +GINGFGRIGR+V R AL+   V++VA+NDPFI  DYM YMFKYDSVHG++K   ++ KD K ++ G KP+ +F  ++P  IPW   GA+YVVESTGVFT               VVISAPS DAPMFV GVN + Y P+
Sbjct:    2 VNVGINGFGRIGRIVFRNALEVGGVDVVAINDPFIDLDYMVYMFKYDSVHGRFK-GSIEAKDGKLIVEG-KPIHIFAEKDPANIPWGSVGADYVVESTGVFT-TIDKASAHLKGGEKVVISAPSADAPMFVCGVNLETYDPK 140          
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: G3P_HUMAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Homo sapiens GN=GAPDH PE=1 SV=3)

HSP 1 Score: 147.902 bits (372), Expect = 2.625e-35
Identity = 72/140 (51.43%), Postives = 95/140 (67.86%), Query Frame = 2
Query:   89 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 508
            K+K+G+NGFGRIGRLV R A     V++VA+NDPFI  +YM YMF+YDS HG++ H  +K ++ K ++ G  P+ +F  R+P +I W   GAEYVVESTGVFT               V+ISAPS DAPMFV+GVN ++Y
Sbjct:    3 KVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKF-HGTVKAENGKLVING-NPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSADAPMFVMGVNHEKY 140          
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: G3P_PANVR (Glyceraldehyde-3-phosphate dehydrogenase OS=Panulirus versicolor PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 3.428e-35
Identity = 78/141 (55.32%), Postives = 96/141 (68.09%), Query Frame = 2
Query:   95 KIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 517
            KIGINGFGRIGRLV R AL+    ++VAVNDPFI+ +YM YMFKYDS HG +K  E+K +D   ++ G+K + VF    PE IPW+K GAEY+VESTGVFT               V+ISAPS DAPMFV GVN ++Y  +
Sbjct:    2 KIGINGFGRIGRLVLRAALEMG-AQVVAVNDPFIALEYMVYMFKYDSTHGMFK-GEVKAEDGALVVDGKK-ITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPSADAPMFVCGVNLEKYSKD 139          
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: G3P_LYOSH (Glyceraldehyde-3-phosphate dehydrogenase OS=Lyophyllum shimeji GN=GPD PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 4.477e-35
Identity = 74/142 (52.11%), Postives = 96/142 (67.61%), Query Frame = 2
Query:   92 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 517
            + +GINGFGRIGR+V R AL    +++VA+NDPFI+ +YM YMFKYDSVHG++K   ++ KD K  + G KPV V+G +NP +I W   G +YVVESTGVFT               V+ISAPS DAPMFV+G N  +Y P+
Sbjct:    2 VNVGINGFGRIGRIVFRNALLNPKIQVVAINDPFINLEYMVYMFKYDSVHGRFK-GTVEAKDGKLWIQG-KPVIVYGEKNPSDIKWGAAGRDYVVESTGVFTTVEKAEGHLKGGAKKVIISAPSADAPMFVMGCNLDQYDPK 141          
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: G3P_FELCA (Glyceraldehyde-3-phosphate dehydrogenase OS=Felis catus GN=GAPDH PE=2 SV=3)

HSP 1 Score: 147.132 bits (370), Expect = 4.477e-35
Identity = 72/139 (51.80%), Postives = 94/139 (67.63%), Query Frame = 2
Query:   92 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 508
            +K+G+NGFGRIGRLV R A     V++VA+NDPFI  +YM YMF+YDS HG++ H  +K ++ K ++ G KP+ +F  R+P  I W   GAEYVVESTGVFT               V+ISAPS DAPMFV+GVN ++Y
Sbjct:    2 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKF-HGTVKAENGKLVING-KPITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKY 138          
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: G3P_COCHE (Glyceraldehyde-3-phosphate dehydrogenase OS=Cochliobolus heterostrophus GN=GPD1 PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 4.477e-35
Identity = 76/142 (53.52%), Postives = 95/142 (66.90%), Query Frame = 2
Query:   92 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 517
            +K+GINGFGRIGR+V R A++ +DV++VAVNDPFI   Y  YM KYDS HGQ+K  ++KV D   L    K +     ++P  IPW++TGA YVVESTGVFT               VVISAPS DAPMFV+GVN + YKP+
Sbjct:    3 VKVGINGFGRIGRIVFRNAIEHNDVDIVAVNDPFIEPHYAAYMLKYDSTHGQFK-GDIKV-DGNNLTVNGKTIRFHMEKDPANIPWSETGAYYVVESTGVFTTTEKAKAHLKGGAKKVVISAPSPDAPMFVMGVNHETYKPD 142          
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: G3P_TRISI (Glyceraldehyde-3-phosphate dehydrogenase OS=Trionyx sinensis GN=GAPDH PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 5.848e-35
Identity = 74/139 (53.24%), Postives = 94/139 (67.63%), Query Frame = 2
Query:   92 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 508
            +KIG+NGFGRIGRLV R A   D V++VA+NDPFI  +YM YMFKYDS HG++ H  +K ++ K ++ G+  + +F  R+P  I W   GAEYVVESTGVFT               VVISAPS DAPMFV+GVN ++Y
Sbjct:    2 VKIGVNGFGRIGRLVTRAAFTCDKVQIVAINDPFIDLNYMVYMFKYDSTHGRF-HGTVKAENGKLVINGQ-AITIFQERDPANIKWGDAGAEYVVESTGVFTTTEKASAHLKGGAKRVVISAPSADAPMFVMGVNHEKY 138          
The following BLAST results are available for this feature:
BLAST of FC931505 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 279
Match NameE-valueIdentityDescription
G3P_PHACH9.022e-3655.40Glyceraldehyde-3-phosphate dehydrogenase OS=Phaner... [more]
G3P2_TRIKO1.539e-3556.12Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Tric... [more]
G3P_PONAB2.010e-3552.14Glyceraldehyde-3-phosphate dehydrogenase OS=Pongo ... [more]
G3P_PLESA2.625e-3554.23Glyceraldehyde-3-phosphate dehydrogenase OS=Pleuro... [more]
G3P_HUMAN2.625e-3551.43Glyceraldehyde-3-phosphate dehydrogenase OS=Homo s... [more]
G3P_PANVR3.428e-3555.32Glyceraldehyde-3-phosphate dehydrogenase OS=Panuli... [more]
G3P_LYOSH4.477e-3552.11Glyceraldehyde-3-phosphate dehydrogenase OS=Lyophy... [more]
G3P_FELCA4.477e-3551.80Glyceraldehyde-3-phosphate dehydrogenase OS=Felis ... [more]
G3P_COCHE4.477e-3553.52Glyceraldehyde-3-phosphate dehydrogenase OS=Cochli... [more]
G3P_TRISI5.848e-3553.24Glyceraldehyde-3-phosphate dehydrogenase OS=Triony... [more]

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Properties
Property NameValue
Genbank descriptionC34105G12EF PostHarvP1 Citrus clementina cDNA clone C34105G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931505 ID=FC931505; Name=FC931505; organism=Citrus clementina; type=EST; length=519bp
GAAAAACAACGCGCCCAACCAAAATTGCAGCGTTAAACAAACCTTCACTA
CTTTCTCATTTTCGATAATATCAATGGCCGGAGACAAGAAGATTAAGATC
GGAATCAACGGTTTCGGAAGGATCGGCCGTTTGGTTGCGAGAGTCGCACT
CCAGAGGGATGATGTGGAGCTGGTGGCTGTCAACGATCCTTTCATCTCCA
CTGATTACATGACATACATGTTTAAGTACGATAGTGTTCACGGTCAGTGG
AAGCACAACGAGTTGAAGGTCAAGGACGAGAAGACCCTCCTCTTCGGTGA
GAAGCCAGTCGCTGTTTTCGGATTCAGGAACCCAGAGGAGATCCCATGGG
CAAAGACTGGAGCCGAGTATGTTGTGGAATCAACTGGAGTGTTCACTGAC
AAGGACAAGGCTGCTGCTCACTTGAAGGGTGGTGCCAAGAAGGTCGTTAT
CTCCGCCCCTAGCAAGGATGCTCCCATGTTTGTTGTGGGCGTCAACGAGA
AAGAATACAAGCCAGAGCT
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