FC931507
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931507 vs. ExPASy Swiss-Prot
Match: UCRI_RICPR (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia prowazekii GN=petA PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.183e-22 Identity = 50/88 (56.82%), Postives = 66/88 (75.00%), Query Frame = 2 Query: 422 SMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVK--NPEWLVVVGVCTHLGCIP 679 S + S DVLAL+S+EVDLS+I G TVTVKW+GKP+FI RT ++I A +V ++ L DP+ D VRVK + WLV +G+CTHLGC+P Sbjct: 40 SFNPSADVLALSSIEVDLSNIAIGQTVTVKWQGKPIFITNRTHDEIAAARAVKMSELIDPERDEVRVKAGHDNWLVTIGICTHLGCVP 127
BLAST of FC931507 vs. ExPASy Swiss-Prot
Match: UCRI_PARDE (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Paracoccus denitrificans GN=petA PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.442e-22 Identity = 60/140 (42.86%), Postives = 78/140 (55.71%), Query Frame = 2 Query: 299 HNHERYPPGDASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRD-----------PQEDSVRVKNP--EWLVVVGVCTHLGCIP 679 H E A++R F Y+ G V A ++ M+ S DV ALAS++VD+S +E GT +TVKW GKPVFIRRRTE++IQ VD+ L D P D R + EWLV++GVCTHLGC+P Sbjct: 3 HADEHAGDHGATRRDFLYYATAGAGTVAAGAAAWTLVN---QMNPSADVQALASIQVDVSGVETGTQLTVKWLGKPVFIRRRTEDEIQAGREVDLGQLIDRSAQNSNKPDAPATDENRTMDEAGEWLVMIGVCTHLGCVP 139
BLAST of FC931507 vs. ExPASy Swiss-Prot
Match: UCRI_RICFE (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia felis GN=petA PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.668e-22 Identity = 50/88 (56.82%), Postives = 65/88 (73.86%), Query Frame = 2 Query: 422 SMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVK--NPEWLVVVGVCTHLGCIP 679 S++ S DVLAL+S+EVDLS+I G TVTVKW+GKPVFI RT + I A +V ++ L DP+ D RVK + WLV +G+CTHLGC+P Sbjct: 40 SLNPSADVLALSSIEVDLSNIAVGQTVTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPETDEARVKAGHDNWLVTIGICTHLGCVP 127
BLAST of FC931507 vs. ExPASy Swiss-Prot
Match: UCRI_RICCN (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia conorii GN=petA PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.668e-22 Identity = 50/88 (56.82%), Postives = 65/88 (73.86%), Query Frame = 2 Query: 422 SMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVK--NPEWLVVVGVCTHLGCIP 679 S++ S DVLAL+S+EVDLS+I G TVTVKW+GKPVFI RT + I A +V ++ L DP+ D RVK + WLV +G+CTHLGC+P Sbjct: 40 SLNPSADVLALSSIEVDLSNIAVGQTVTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPEADQARVKAGHDNWLVTIGICTHLGCVP 127
BLAST of FC931507 vs. ExPASy Swiss-Prot
Match: UCRI_RHOCA (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rhodobacter capsulatus GN=petA PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.491e-21 Identity = 51/103 (49.51%), Postives = 67/103 (65.05%), Query Frame = 2 Query: 425 MSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVR------------------VKNPEWLVVVGVCTHLGCIP 679 M+AS DV A+AS+ VD+S++E GT +TVKWRGKPVFIRRR E+DI+LA SV + +LRD ++ EWLV++GVCTHLGC+P Sbjct: 38 MNASADVKAMASIFVDVSAVEVGTQLTVKWRGKPVFIRRRDEKDIELARSVPLGALRDTSAENANKPGAEATDENRTLPAFDGTNTGEWLVMLGVCTHLGCVP 140
BLAST of FC931507 vs. ExPASy Swiss-Prot
Match: UCRI_BRAJA (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Bradyrhizobium japonicum GN=petA PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.652e-19 Identity = 47/92 (51.09%), Postives = 62/92 (67.39%), Query Frame = 2 Query: 413 FVLSMSASKDVLAL-ASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVK--NPEWLVVVGVCTHLGCIP 679 F+ M+ +A A +EVDLS I G + V WRGKP++I RT++ I A +V+VASL DPQ D RVK + +WLVV+G+CTHLGCIP Sbjct: 35 FISQMNPDASTIAAGAPIEVDLSPIAEGQDIKVFWRGKPIYISHRTKKQIDEARAVNVASLPDPQSDEARVKSGHEQWLVVIGICTHLGCIP 126
BLAST of FC931507 vs. ExPASy Swiss-Prot
Match: UCRI_RHOSH (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rhodobacter sphaeroides GN=petA PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.076e-19 Identity = 53/130 (40.77%), Postives = 72/130 (55.38%), Query Frame = 2 Query: 332 SKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRV--------------KNPEWLVVVGVCTHLGCIP 679 ++R F Y+ G V + + M+ S DV ALAS+ VD+SS+EPG +TVK+ GKP+FIRRRTE DI+L SV + L D + + + EWLV+ GVCTHLGC+P Sbjct: 10 TRRDFLYYATAGAGAVATGAA---VWPLINQMNPSADVQALASIFVDVSSVEPGVQLTVKFLGKPIFIRRRTEADIELGRSVQLGQLVDTNARNANIDAGAEATDQNRTLDEAGEWLVMWGVCTHLGCVP 136
BLAST of FC931507 vs. ExPASy Swiss-Prot
Match: UCRI_RHOVI (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rhodopseudomonas viridis GN=petA PE=3 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 3.015e-18 Identity = 51/121 (42.15%), Postives = 70/121 (57.85%), Query Frame = 2 Query: 326 DASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLAL-ASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVK--NPEWLVVVGVCTHLGCIP 679 +A++R F Y V A+ + + F+ M+ +A A +++D+S + G V V WRGKP+FIR RT ++IQ + DV +L DPQ DS RVK EWLVV CTHLGCIP Sbjct: 8 EATRRDFLYVATAA---VGAAGVAAVAWPFITQMNPDAATIAAGAPIDIDISPVTEGQIVRVFWRGKPIFIRHRTAKEIQSEEAADVGALIDPQPDSARVKPGKAEWLVVYASCTHLGCIP 125
BLAST of FC931507 vs. ExPASy Swiss-Prot
Match: UCRI_CHRVI (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Chromatium vinosum GN=petA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.734e-11 Identity = 39/102 (38.24%), Postives = 56/102 (54.90%), Query Frame = 2 Query: 404 ILKFVLSMSASKDVLAL-ASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVD---------VASLRDPQEDSVRVKNPEWLVVVGVCTHLGCIP 679 ++ FV SM+ S A A +E D+S +EPG + VKWRG PV++ R+ E + +S D V D ++ R PE+LV +G+CTHLGC P Sbjct: 40 LVPFVASMNPSARARAAGAPVEADISKLEPGALLRVKWRGMPVWVVHRSSEMLAALSSNDPKLVDPTSEVPQQPDYCKNPTRSIKPEYLVAIGICTHLGCSP 141 The following BLAST results are available for this feature:
BLAST of FC931507 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931507 ID=FC931507; Name=FC931507; organism=Citrus clementina; type=EST; length=681bpback to top |