FC931508

Overview
NameFC931508
Unique NameFC931508
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length506
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931508 vs. ExPASy Swiss-Prot
Match: CRR28_ARATH (Putative cysteine-rich repeat secretory protein 28 OS=Arabidopsis thaliana GN=CRRSP28 PE=5 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 5.605e-27
Identity = 61/138 (44.20%), Postives = 82/138 (59.42%), Query Frame = 3
Query:    3 IIWYDNCLLKYTNTEFFGQIDNKNKFYMWNVRVVTEPVSFNQRTKELLTQLAEKAYVTPK----------LYAVGEMELGKSNKLYGLTQCTRDLSSVDCKKCLDGIIRELPSCCDGKEGGRVVSGSCNFRYEIYPFV 386
            IIWYD CL + +  + + +ID +N FY+ N + V+    FN+ T  LL +L  KA  T K          LYA GE  +G + K+Y + QCT+DL    C  CL+ I R    CCDGK+GGRV+  SCNFRYE+YPF+
Sbjct:  121 IIWYDQCLFEISTVDSYHKIDYENDFYLSNPKNVSNRELFNRETSALLEKLTTKA--TDKKNIDGANQLVLYAAGEKRIG-TKKVYAMVQCTKDLVFTTCSSCLEWIFRMYSDCCDGKQGGRVLGTSCNFRYELYPFL 255          
BLAST of FC931508 vs. ExPASy Swiss-Prot
Match: CRR23_ARATH (Putative cysteine-rich repeat secretory protein 23 OS=Arabidopsis thaliana GN=CRRSP23 PE=5 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 1.057e-25
Identity = 62/136 (45.59%), Postives = 85/136 (62.50%), Query Frame = 3
Query:    3 IIWYDNCLLKYTNTEFFGQIDNKNKFYMWNVRVVT-EPVSFNQRTKELLTQLAEKAYVTPK-------LYAVGEMELGKSNKLYGLTQCTRDLSSVDCKKCLDGIIRELPSCCDGKEGGRVVSGSCNFRYEIYPFV 386
            IIWYDNC+L  +N  +  +     +F  +N + V+ +  SFN++T+ LL +L EKA            LYA GE  LGK  KLY + QCT+DLS  +C  CL+ I+ +LP CC+ K+GGR +S SCNFRYE+Y FV
Sbjct:  121 IIWYDNCVLTISNISYVWRDRLPEQFLYFNAKDVSGDAKSFNEKTRTLLYKLKEKASSKENIPNKKNYLYATGEESLGKM-KLYAMVQCTQDLSIKNCNVCLNWILGKLPKCCNDKQGGRFLSTSCNFRYELYLFV 255          
BLAST of FC931508 vs. ExPASy Swiss-Prot
Match: CRR35_ARATH (Putative cysteine-rich repeat secretory protein 35 OS=Arabidopsis thaliana GN=CRRSP35 PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.076e-25
Identity = 65/137 (47.45%), Postives = 85/137 (62.04%), Query Frame = 3
Query:    3 IIWYDNCLLKYTNT--EFFGQIDNKNKFYMWNVR-VVTEPVSFNQRTKELLTQLAEKA-YVT-----PKLYAVGEMELGKSNKLYGLTQCTRDLSSVDCKKCLDGIIRELPSCCDGKEGGRVVSGSCNFRYEIYPFV 386
            IIWYD C L  +    +   +ID KN F M N   V +EP SF++ T++ L +L +KA Y T        YA GE +LGK  KLY + QC  D+  + CK CL+  IRELP CCDGK+GGR++  SCN RYE+YPF+
Sbjct:  123 IIWYDQCFLVISTIKPQLPRKIDFKNTFSMHNPNNVSSEPGSFDKMTRDFLYKLVQKASYPTVVEHQSTYYAAGEKKLGK-RKLYAMMQCASDI--LQCKVCLEWCIRELPKCCDGKQGGRILGMSCNLRYELYPFL 256          
BLAST of FC931508 vs. ExPASy Swiss-Prot
Match: CRR27_ARATH (Putative cysteine-rich repeat secretory protein 27 OS=Arabidopsis thaliana GN=CRRSP27 PE=5 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 8.949e-25
Identity = 56/137 (40.88%), Postives = 78/137 (56.93%), Query Frame = 3
Query:    3 IIWYDNCLLKYTNTEFFGQIDNKNKFYMWNVRVVTEPVSFNQRTKELLTQLAEKAYVTPK---------LYAVGEMELGKSNKLYGLTQCTRDLSSVDCKKCLDGIIRELPSCCDGKEGGRVVSGSCNFRYEIYPFV 386
            +IWYD CL + +    F +ID +N FY+ N   V +   FN+ T  LL +L  KA  T K         LYA G+  +G  N +Y + QCT+DL +     C + I +    CC+GK+GGRV+  SCNFRYE+YPF+
Sbjct:  120 VIWYDQCLFEISTINSFNKIDYENDFYLSNPNDVNDKELFNKETSALLEELTNKA--TDKNNMIGNKFVLYAAGDKRIGTKN-VYAMVQCTKDLVTTTSAACFEWIFKMFSKCCEGKQGGRVLGTSCNFRYELYPFL 253          
BLAST of FC931508 vs. ExPASy Swiss-Prot
Match: CRR20_ARATH (Putative cysteine-rich repeat secretory protein 20 OS=Arabidopsis thaliana GN=CRRSP20 PE=5 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 4.441e-24
Identity = 58/137 (42.34%), Postives = 80/137 (58.39%), Query Frame = 3
Query:    3 IIWYDNCLLKYTNTEFFGQIDNKNKFYMWNVRVVT-EPVSFNQRTKELLTQLAEKA--------YVTPKLYAVGEMELGKSNKLYGLTQCTRDLSSVDCKKCLDGIIRELPSCCDGKEGGRVVSGSCNFRYEIYPFV 386
            IIWYD CL++ ++    G++D  N F M N +  +  P+ F Q+  + L  L  KA        Y    +YA+GE  +G + KLY + QCT+DL    C  CL+ II +   CCDGK GGRV S SCN+RYE+YPF+
Sbjct:  127 IIWYDQCLMEISSIRNEGKLDYNNNFCMSNTKNASGSPLEFKQKMVDFLLNLGLKATSEDNMDKYNQAVMYAMGEERVG-TKKLYAMVQCTKDLWLKTCYACLEWIILKESDCCDGKLGGRVFSTSCNYRYELYPFI 262          
BLAST of FC931508 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 4.441e-24
Identity = 53/131 (40.46%), Postives = 80/131 (61.07%), Query Frame = 3
Query:    3 IIWYDNCLLKYTNTEFFGQIDNKNKFYMWNVRVVTE-PVS-FNQRTKELLTQLAEKAYVTPKLYAVGEMELGKSNKLYGLTQCTRDLSSVDCKKCLDGIIRELPSCCDGKEGGRVVSGSCNFRYEIYPFVN 389
            +IWYD C+++Y+N    GQ+  +   ++ N + +TE  VS FN+    LL  +A KA ++ + +A  +        +Y L QCT DL++ DC+ CL  +I  LP CCD   GGRV++ SC+FRYE+YPF N
Sbjct:  119 VIWYDECMVRYSNQSIVGQMRIRPGVFLTNKQNITENQVSRFNESLPALLIDVAVKAALSSRKFATEKANFTVFQTIYSLVQCTPDLTNQDCESCLRQVINYLPRCCDRSVGGRVIAPSCSFRYELYPFYN 249          
BLAST of FC931508 vs. ExPASy Swiss-Prot
Match: CRR31_ARATH (Putative cysteine-rich repeat secretory protein 31 OS=Arabidopsis thaliana GN=CRRSP31 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.204e-23
Identity = 60/138 (43.48%), Postives = 82/138 (59.42%), Query Frame = 3
Query:    3 IIWYDNCLLKYTNTEFFGQIDNKNKFYMWNV-RVVTEPVSFNQRTKELLTQLAEKAYVTPK-------LYAVGEMELGKSNKLYGLTQCTRD--LSSVDCKKCLDGIIRELPSCCDGKEGGRVVSGSCNFRYEIYPFV 386
            IIW+D C ++ T  E   +++  N FYM N  +V+ +  SFN+ T   L QLA +A            LY+  E  +G + KLY + QCTRD  +    CK+CL+ II + P CCDGK+GGRV+  SCNFRYE YPF+
Sbjct:  126 IIWFDQCFVEITAIEVM-EVNYDNNFYMHNPNKVMGDAKSFNKETMAFLEQLALEATRKDNMEDGMMALYSAREKMVG-TKKLYAMVQCTRDVFMFKTMCKECLERIISQYPKCCDGKQGGRVLGTSCNFRYEFYPFL 261          
BLAST of FC931508 vs. ExPASy Swiss-Prot
Match: CRR40_ARATH (Putative cysteine-rich repeat secretory protein 40 OS=Arabidopsis thaliana GN=CRRSP40 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 6.413e-23
Identity = 59/141 (41.84%), Postives = 83/141 (58.87%), Query Frame = 3
Query:    3 IIWYDNCLLKYTNTEFF----GQIDNKNKFYMWNVRVVTEPV-SFNQRTKELLTQLAEKAYVTPK-------LYAVGEMELGKSNKLYGLTQCTRDLSSVD-CKKCLDGIIRELPSCCDGKEGGRVVSGSCNFRYEIYPFV 386
            IIW+D C ++ T+         +I+ +N F + N   V+  + SFN  T  LL +LA KA            LYA GE  +G + K+Y + QC RDL     CK+CL+ II+E P CCDGK+GGR++  SC+FRYE+YPF+
Sbjct:  126 IIWFDQCFVEITSISVIDFNISKINYENNFPLHNPNRVSGDIKSFNNETMALLKELALKANNKDNMDNGKMALYASGEKRVG-TKKVYAMVQCMRDLVKPKMCKECLESIIKEFPECCDGKQGGRILGTSCDFRYELYPFL 265          
BLAST of FC931508 vs. ExPASy Swiss-Prot
Match: CRR30_ARATH (Cysteine-rich repeat secretory protein 30 OS=Arabidopsis thaliana GN=CRRSP30 PE=2 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 8.376e-23
Identity = 59/141 (41.84%), Postives = 83/141 (58.87%), Query Frame = 3
Query:    3 IIWYDNCLLKYTNTEFF----GQIDNKNKFYMWNVRVVTEPV-SFNQRTKELLTQLAEKAYVTPK-------LYAVGEMELGKSNKLYGLTQCTRDLSSVD-CKKCLDGIIRELPSCCDGKEGGRVVSGSCNFRYEIYPFV 386
            IIW+D C ++ T+         +I+ +N F + N   V+  + SFN  T  LL +LA KA            LYA GE  +G + K+Y + QC RDL     CK+CL+ II+E P CCDGK+GGR++  SC+FRYE+YPF+
Sbjct:  126 IIWFDQCFVEITSISVIDFNISKINYENNFPLHNPNRVSGNIKSFNNETMALLKELALKANNKDNMDNGKMALYASGEKRVG-TKKVYAMVQCMRDLVKPKMCKECLESIIKEFPECCDGKQGGRILGTSCDFRYELYPFL 265          
BLAST of FC931508 vs. ExPASy Swiss-Prot
Match: CRR17_ARATH (Putative cysteine-rich repeat secretory protein 17 OS=Arabidopsis thaliana GN=CRRSP17 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.209e-21
Identity = 57/142 (40.14%), Postives = 78/142 (54.93%), Query Frame = 3
Query:    3 IIWYDNCLLKYTNTEFFGQIDNKNKFYMWNVRVV-TEPVSFNQRTKELLTQLAEKAYVT----------PKLYAVGEMELGKSNKLYGLTQCTRDLSSVDCKKCLDGIIRELPSCC-DGKEGGRVVSGSCNFRYEIYPFVNA 392
            IIW+D CLL+ ++ +  GQ++  + F M N + V  +P SF  +   L   ++  A             P LY  GE  LG   K+YG+ QCT DLS   C++CL   I +  +C   GK G RV+  SCNFRYE+YPFVNA
Sbjct:  127 IIWFDQCLLEISSIDNVGQLNYGDSFCMSNAKNVGDDPFSFILKWDTLFDNISRIAITEKNKNLKDTNKPALYGAGEKRLGTKKKMYGMVQCTDDLSVKACEECLVANILKFQNCWKSGKRGARVLDRSCNFRYELYPFVNA 268          
The following BLAST results are available for this feature:
BLAST of FC931508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
CRR28_ARATH5.605e-2744.20Putative cysteine-rich repeat secretory protein 28... [more]
CRR23_ARATH1.057e-2545.59Putative cysteine-rich repeat secretory protein 23... [more]
CRR35_ARATH3.076e-2547.45Putative cysteine-rich repeat secretory protein 35... [more]
CRR27_ARATH8.949e-2540.88Putative cysteine-rich repeat secretory protein 27... [more]
CRR20_ARATH4.441e-2442.34Putative cysteine-rich repeat secretory protein 20... [more]
CRK25_ARATH4.441e-2440.46Cysteine-rich receptor-like protein kinase 25 OS=A... [more]
CRR31_ARATH2.204e-2343.48Putative cysteine-rich repeat secretory protein 31... [more]
CRR40_ARATH6.413e-2341.84Putative cysteine-rich repeat secretory protein 40... [more]
CRR30_ARATH8.376e-2341.84Cysteine-rich repeat secretory protein 30 OS=Arabi... [more]
CRR17_ARATH1.209e-2140.14Putative cysteine-rich repeat secretory protein 17... [more]

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Properties
Property NameValue
Genbank descriptionC34105H03EF PostHarvP1 Citrus clementina cDNA clone C34105H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931508 ID=FC931508; Name=FC931508; organism=Citrus clementina; type=EST; length=506bp
CAATCATTTGGTACGACAATTGTCTTTTGAAGTACACAAACACGGAGTTC
TTTGGCCAAATTGACAACAAAAACAAGTTCTATATGTGGAACGTGAGAGT
GGTCACCGAGCCGGTGTCTTTCAATCAAAGGACCAAGGAATTGTTAACCC
AACTAGCTGAAAAAGCTTATGTTACTCCCAAATTATATGCGGTAGGAGAA
ATGGAGCTCGGAAAATCGAATAAACTCTATGGATTGACTCAATGCACAAG
GGATCTTTCTAGCGTTGATTGCAAGAAGTGTCTTGATGGCATAATTCGTG
AGCTCCCAAGCTGTTGTGATGGGAAAGAAGGAGGAAGAGTTGTTAGTGGA
AGTTGTAACTTTAGATATGAGATTTATCCCTTTGTTAATGCTTGAAGTTT
AAAACAATCTCTGGCTTTTACTTAGGGATCTTTCCCATAATATTAAATAA
ATAAAATAAGAGGAACAATATGTAAGTCTTATATTCCATTGGTTAATATG
AGTTTA
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