FC931508

Overview
NameFC931508
Unique NameFC931508
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length506
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC931508_ssr444 microsatellite FC931508_ssr444:444..455. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of FC931508 vs. ExPASy Swiss-Prot
Match: CRK14_ARATH (Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana GN=CRK14 PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 1.530e-16
Identity = 47/129 (36.43%), Postives = 72/129 (55.81%), Query Frame = 3
Query:   21 CLLKYTNTEFFGQIDNKNKFYMWNVRVVTEPVS-FNQRTKELLTQLAEKAYVTP----KLYAVGEMELGKSNKLYGLTQCTRDLSSVDCKKCLDGIIRELPSCCDGKEGGRVVSGSCNFRYEIYPFVNA 392
            C+++Y+N+ FFG +  +  FY+ NV  +T  ++ F+Q  +EL  ++      +P    K YA     L     +Y L QCT DLS  DC  CL   + +  +CC+GK+GG V   SC FR+E++PF  A
Sbjct:  116 CMVRYSNSSFFGSLKAEPHFYIHNVDDITSNLTEFDQVWEELARRMIAST-TSPSSKRKYYAADVAALTAFQIIYALMQCTPDLSLEDCHICLRQSVGDYETCCNGKQGGIVYRASCVFRWELFPFSEA 243          
BLAST of FC931508 vs. ExPASy Swiss-Prot
Match: CRR13_ARATH (Putative cysteine-rich repeat secretory protein 13 OS=Arabidopsis thaliana GN=CRRSP13 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 7.593e-16
Identity = 50/134 (37.31%), Postives = 76/134 (56.72%), Query Frame = 3
Query:    3 IIWYDNCLLKYTNTEFFGQIDNKNKFYMWNVRVVTEPVS-FNQRTKELLTQL----AEKAYVTPKLYAVGEMELGKSNKLYGLTQCTRDLSSVDCKKCLDGIIRELPSCC-DGKEGGRVVSGSCNFRYEIYPFV 386
            IIWYD C+L+ ++    G+I   + F M NV+ V+     F  + K+L  +L     +    +   YAVGE  +G+ NK+Y + QC  DL++  C  CL+ II    S   D ++G RV+S SC+ RYE+YPF+
Sbjct:  121 IIWYDQCVLEISSVNTKGRIRYDSFFNMTNVKNVSSNAEQFKNKRKDLFHKLLLGATKDVSDSNDAYAVGETRIGR-NKMYAMMQCALDLTTNGCYVCLEWIIGRYDSFYFDRRQGTRVLSRSCSLRYELYPFL 253          
BLAST of FC931508 vs. ExPASy Swiss-Prot
Match: CRR55_ARATH (Cysteine-rich repeat secretory protein 55 OS=Arabidopsis thaliana GN=CRRSP55 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.295e-15
Identity = 49/130 (37.69%), Postives = 67/130 (51.54%), Query Frame = 3
Query:    6 IWYDNCLLKYTNTEFFGQIDNKNKFYMWNVRVVTE--PVSFNQRTKELLTQLAEKAYVTPKLYAVGE--MELGKSNKLYGLTQCTRDLSSVDCKKCLDGIIRELPSCCDGKEGGRVVSGSCNFRYEIYPF 383
            I YD C L+Y+   F G++D       +NV  VTE  P  F+     L  ++  +A V PK   +G+   +L     L GL QCTRDLS +DC +C    +    + C  K+G RV+  SC  RYE YPF
Sbjct:  112 ILYDFCFLRYSQENFIGKLDTGAGLIYFNVANVTEIDPKKFDNELGALFDKIRSEA-VLPKNKGLGKGKTKLTPFVTLNGLVQCTRDLSELDCAQCFATAVGSFMTTCHNKKGCRVLYSSCYVRYEFYPF 240          
BLAST of FC931508 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.692e-15
Identity = 50/130 (38.46%), Postives = 65/130 (50.00%), Query Frame = 3
Query:    3 IIWYDNCLLKYTNTEFFGQIDNKNKFYMWNVRVVTEPVS--FNQRTKELLTQLAEKAY-VTPKLYAVGEMELGKSNKLYGLTQCTRDLSSVDCKKCLDGIIRELPSCCDGKEGGRVVSGSCNFRYEIYPF 383
            +I YD C+L Y++   F           WN + VT   S  FN     L+ + AE+A   T K +AV + +   S  LY   QC  DL+S DC  CL   I+EL      K GGR +  SCN RYE+YPF
Sbjct:  117 LIQYDECMLGYSDRNIFMDTVTTTTIITWNTQKVTADQSDRFNDAVLSLMKKSAEEAANSTSKKFAVKKSDFSSSQSLYASVQCIPDLTSEDCVMCLQQSIKEL---YFNKVGGRFLVPSCNSRYEVYPF 243          
BLAST of FC931508 vs. ExPASy Swiss-Prot
Match: CRK26_ARATH (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 6.428e-15
Identity = 47/131 (35.88%), Postives = 66/131 (50.38%), Query Frame = 3
Query:    3 IIWYDNCLLKYTNTEFFGQIDNKNKFYMWNVRVVT-EPVSFNQRTKELLTQLAEKAYV---TPKLYAVGEMELGKSNKLYGLTQCTRDLSSVDCKKCLDGIIRELPSCCDGKEGGRVVSGSCNFRYEIYPF 383
            IIWYD C  +Y+N   F +++      +   R  T +  S+ +  + LL  L  +A V   + K + VGE        L+GL QCT D+S  DC  CL   I ++PSCCD K G  V+S SC   Y  + F
Sbjct:  114 IIWYDKCTFRYSNRTIFNRLEISPHTSITGTRNFTGDRDSWEKSLRGLLEGLKNRASVIGRSKKNFVVGETSGPSFQTLFGLVQCTPDISEEDCSYCLSQGIAKIPSCCDMKMGSYVMSPSCMLAYAPWRF 244          
BLAST of FC931508 vs. ExPASy Swiss-Prot
Match: CRR14_ARATH (Putative cysteine-rich repeat secretory protein 14 OS=Arabidopsis thaliana GN=CRRSP14 PE=3 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 8.395e-15
Identity = 55/164 (33.54%), Postives = 79/164 (48.17%), Query Frame = 3
Query:    3 IIWYDNCLLKYTNTEFFGQIDNKNKFYMWNVRVVTEPVSFNQRTK-------------ELLTQLAE-------KAYVTPKLYAVGEMELGKSNKLYGLTQCTRDLSSVDCKKCLDGIIRELPSCCDGK-----EGGRVVSGSCNFRYEIYPFVNA*SLKQSLAF 419
            IIWYD C L++++    G+I+     Y  N+ + T     N +T              E LT +A        K    P LYA GE   G + K+Y + QCT DL+   C +C++  +R+   C + K     +G RV+  SCNFR+E YPFVNA +    L F
Sbjct:  128 IIWYDQCFLEFSSISTGGKIN-----YDDNICIDTARARPNAKTHTGDDSVLEFLRLFENLTNIAVTKRNNFVKDVEKPALYAAGEKRFG-NKKIYVMVQCTHDLTPRACVECVNHNVRQFQDCYEDKPVGLKKGARVLGRSCNFRFERYPFVNAKTSPNYLKF 285          
BLAST of FC931508 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 9.282e-14
Identity = 43/131 (32.82%), Postives = 64/131 (48.85%), Query Frame = 3
Query:    3 IIWYDNCLLKYTNTEFFGQID-NKNKFYMWNVRVVTEPVSFNQRTKELLTQLAEKAYV--TPKLYAVGEMELGKS-NKLYGLTQCTRDLSSVDCKKCLDGIIRELPSCCDGKEGGRVVSGSCNFRYEIYPF 383
            ++WY +C+ +Y+N   +G+ + N  K ++    +      F +  + LL +L   A      + YA G         + YG  QCT DLS  DC  CL      +PSCCD + G R  S SCNFR+E + F
Sbjct:  119 VVWYTHCMFRYSNRTIYGRKETNPTKAFIAGEEISANRDDFERLQRGLLDRLKGIAAAGGPNRKYAQGNGSASAGYRRFYGTVQCTPDLSEQDCNDCLVFGFENIPSCCDAEIGLRWFSPSCNFRFETWRF 249          
BLAST of FC931508 vs. ExPASy Swiss-Prot
Match: CRK12_ARATH (Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 2.068e-13
Identity = 44/141 (31.21%), Postives = 67/141 (47.52%), Query Frame = 3
Query:    3 IIWYDN---CLLKYTNTEFFGQID-NKNKFYMWNVRVVTEPVSFNQRTKELLTQLAEKA-------YVTPKLYAVGEMELGKSNKLYGLTQCTRDLSSVDCKKCLDGIIRELPSCCDGKEGGRVVSGSCNFRYEIYPFVNA 392
            +IW  N   C+++Y++T F G  +   ++ ++      T    FN     L  ++ ++A       +   K Y      L  S  LY + QCT DLS  +C  CL   +    SCC G++GG +V  SC FR E+YPF  A
Sbjct:  106 LIWIANRTICMIRYSDTSFVGSFELEPHREFLSIHGYKTNETEFNTVWSRLTQRMVQEASSSTDATWSGAKYYTADVAALPDSQTLYAMMQCTPDLSPAECNLCLTESVVNYQSCCLGRQGGSIVRLSCAFRAELYPFGGA 246          
BLAST of FC931508 vs. ExPASy Swiss-Prot
Match: CRK35_ARATH (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 7.858e-13
Identity = 40/140 (28.57%), Postives = 70/140 (50.00%), Query Frame = 3
Query:    9 WYDNCLLKYTNTEFFGQIDNKNKFYMWNVRVV----TEPVSFNQRTKELLTQLAEKAYVTP--------KLYAVGEMELGKSNKLYGLTQCTRDLSSVDCKKCLDGIIRELPSCCDGKEGGRVVSGSCNFRYEIYPFVNA 392
            W D C+++Y+N  F G +  +    +++   +    T    F++  +EL+ +    A ++         K +A     L     +Y + QCT D+SS DC+ CL   + +  SCC GK+GG V+  SC  R+++YP+  A
Sbjct:  110 WPDCCMVRYSNVSFSGSLVMEPSETLYHTGDIEDTGTNLTVFDRIWEELMLRTITAASLSSSNGSSFGQKYFAAEVASLTTFQTMYAMMQCTPDVSSKDCEFCLKTSVGDYESCCRGKQGGAVIRPSCFVRWDLYPYAGA 249          
BLAST of FC931508 vs. ExPASy Swiss-Prot
Match: CRK30_ARATH (Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana GN=CRK30 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.340e-12
Identity = 41/134 (30.60%), Postives = 64/134 (47.76%), Query Frame = 3
Query:   21 CLLKYTNTEFFGQIDNKNKFYMWNV-RVVTEPVSFNQRTKELLTQLAEKA---------YVTPKLYAVGEMELGKSNKLYGLTQCTRDLSSVDCKKCLDGIIRELPSCCDGKEGGRVVSGSCNFRYEIYPFVNA 392
            C+ +Y N      +D ++    +NV  + T    F++  + L+  +  KA         +   + YA  E  L  S  +Y L QCT D+S  +C  CL   + +   CC GK+GG V   SC FR+++YPF  A
Sbjct:  120 CMARYYNQPSSRPLDLESVSIGYNVGNLSTNLTDFDRLWERLIAHMVTKASSASIKYLSFDNSRFYAADETNLTNSQMVYALMQCTPDVSPSNCNTCLKQSVDDYVGCCHGKQGGYVYRPSCIFRWDLYPFNGA 253          
The following BLAST results are available for this feature:
BLAST of FC931508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
CRK14_ARATH1.530e-1636.43Cysteine-rich receptor-like protein kinase 14 OS=A... [more]
CRR13_ARATH7.593e-1637.31Putative cysteine-rich repeat secretory protein 13... [more]
CRR55_ARATH1.295e-1537.69Cysteine-rich repeat secretory protein 55 OS=Arabi... [more]
CRK5_ARATH1.692e-1538.46Cysteine-rich receptor-like protein kinase 5 OS=Ar... [more]
CRK26_ARATH6.428e-1535.88Cysteine-rich receptor-like protein kinase 26 OS=A... [more]
CRR14_ARATH8.395e-1533.54Putative cysteine-rich repeat secretory protein 14... [more]
CRK29_ARATH9.282e-1432.82Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
CRK12_ARATH2.068e-1331.21Putative cysteine-rich receptor-like protein kinas... [more]
CRK35_ARATH7.858e-1328.57Putative cysteine-rich receptor-like protein kinas... [more]
CRK30_ARATH1.340e-1230.60Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionC34105H03EF PostHarvP1 Citrus clementina cDNA clone C34105H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931508 ID=FC931508; Name=FC931508; organism=Citrus clementina; type=EST; length=506bp
CAATCATTTGGTACGACAATTGTCTTTTGAAGTACACAAACACGGAGTTC
TTTGGCCAAATTGACAACAAAAACAAGTTCTATATGTGGAACGTGAGAGT
GGTCACCGAGCCGGTGTCTTTCAATCAAAGGACCAAGGAATTGTTAACCC
AACTAGCTGAAAAAGCTTATGTTACTCCCAAATTATATGCGGTAGGAGAA
ATGGAGCTCGGAAAATCGAATAAACTCTATGGATTGACTCAATGCACAAG
GGATCTTTCTAGCGTTGATTGCAAGAAGTGTCTTGATGGCATAATTCGTG
AGCTCCCAAGCTGTTGTGATGGGAAAGAAGGAGGAAGAGTTGTTAGTGGA
AGTTGTAACTTTAGATATGAGATTTATCCCTTTGTTAATGCTTGAAGTTT
AAAACAATCTCTGGCTTTTACTTAGGGATCTTTCCCATAATATTAAATAA
ATAAAATAAGAGGAACAATATGTAAGTCTTATATTCCATTGGTTAATATG
AGTTTA
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