FC931509

Overview
NameFC931509
Unique NameFC931509
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length463
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931509 vs. ExPASy Swiss-Prot
Match: HTPG_PROVI (Chaperone protein htpG OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=htpG PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.503e-22
Identity = 54/105 (51.43%), Postives = 75/105 (71.43%), Query Frame = 2
Query:  128 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 442
            + F ++AE+ QLL LI+++ Y++ EIFLREL+SN++DAL K RF SLTD   + A  E  IHI  DK      I DSGIGM++ +L+ NLGT+A+SGT  FM++L
Sbjct:   10 QEFEYKAEMKQLLDLIVHSLYTHPEIFLRELVSNAADALSKARFSSLTDGGLMAAAGEDAIHITLDKEKLLFVIEDSGIGMSEDELIANLGTVAKSGTLGFMQSL 114          
BLAST of FC931509 vs. ExPASy Swiss-Prot
Match: HTPG_OCEIH (Chaperone protein htpG OS=Oceanobacillus iheyensis GN=htpG PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.503e-22
Identity = 50/97 (51.55%), Postives = 72/97 (74.23%), Query Frame = 2
Query:  140 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEF 430
            F+AE  +LL ++IN+ YS +E+FLRELISN+SDA+DKI +++LTD S        +I I P+K   +L+++D+GIGMTK +L NNLG IA+SG+  F
Sbjct:    6 FKAESQKLLDMVINSIYSQREVFLRELISNASDAIDKIYYKALTDDSLSFDVDNYYIKITPNKEERTLTVVDTGIGMTKEELENNLGVIAKSGSHTF 102          
BLAST of FC931509 vs. ExPASy Swiss-Prot
Match: HTPG_BACLD (Chaperone protein htpG OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=htpG PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.503e-22
Identity = 52/99 (52.53%), Postives = 74/99 (74.75%), Query Frame = 2
Query:  140 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFME 436
            F+AE  +LL ++IN+ YS KE+FLRELISN+SDA+DKI +++LTD S    + + +I I  DK N +L+I D+GIGMTK +L  +LGTIA+SG+  F +
Sbjct:    6 FKAESKRLLDIMINSIYSQKEVFLRELISNASDAIDKIYYKALTDDSLTFNKDDYYIKISADKENRTLTIADTGIGMTKEELEEHLGTIAKSGSLAFKQ 104          
BLAST of FC931509 vs. ExPASy Swiss-Prot
Match: HTPG_ALKMQ (Chaperone protein htpG OS=Alkaliphilus metalliredigens (strain QYMF) GN=htpG PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.503e-22
Identity = 54/97 (55.67%), Postives = 72/97 (74.23%), Query Frame = 2
Query:  140 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEF 430
            F+AE  +LL L+IN+ Y++KEIFLRELISNSSDA+DKI +++LTD+S +  + + +I I  DK N  L I D GIGMTK +L  NLG IA+SG+  F
Sbjct:    6 FKAESKRLLDLMINSIYTHKEIFLRELISNSSDAIDKIYYKALTDESMIFNKEDYYIKITTDKENKMLIISDMGIGMTKEELEENLGVIAQSGSFTF 102          
BLAST of FC931509 vs. ExPASy Swiss-Prot
Match: HTPG_VIBSL (Chaperone protein htpG OS=Vibrio splendidus (strain LGP32) GN=htpG PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 3.269e-22
Identity = 51/106 (48.11%), Postives = 78/106 (73.58%), Query Frame = 2
Query:  128 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 445
            ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF++L++        +L + +  +   N+L+I D+GIGM++ +++ +LGTIA+SGT +F   L+
Sbjct:   10 ETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFQALSNGDLYQGDADLGVKLSFNAEANTLTISDNGIGMSRDNVIEHLGTIAKSGTADFFSKLS 115          
BLAST of FC931509 vs. ExPASy Swiss-Prot
Match: HTPG_TREPA (Chaperone protein htpG OS=Treponema pallidum GN=htpG PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 3.269e-22
Identity = 55/103 (53.40%), Postives = 73/103 (70.87%), Query Frame = 2
Query:  134 FAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 442
            + FQ E++QLL+LII++ YS+KEIFLRELISN+SDALDK+++E+L D +      E  I I  ++    L + D+GIGM   DL  NLGTIARSGTK F+  L
Sbjct:    4 YEFQTEVSQLLTLIIHSLYSHKEIFLRELISNASDALDKLKYEALVDGTYKQLHCEARIDIAFEEDAQRLVVRDTGIGMNAEDLRANLGTIARSGTKAFLSTL 106          
BLAST of FC931509 vs. ExPASy Swiss-Prot
Match: HTPG_RICM5 (Chaperone protein htpG OS=Rickettsia massiliae (strain Mtu5) GN=htpG PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 3.269e-22
Identity = 53/111 (47.75%), Postives = 75/111 (67.57%), Query Frame = 2
Query:  113 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 445
            M    E   F AE+ ++L+L+I++ YSNKEIF+RELISN+SDA DK+R+ S ++   +       I +  DK N  + I D+GIGM K DL+ NLGTIARSGT  F+++L+
Sbjct:    1 MIMTQEKKKFDAEVGKILNLMIHSLYSNKEIFMRELISNASDACDKLRYLSQSNSELVAGDSNFKITVKVDKDNGQIIIRDNGIGMNKDDLIENLGTIARSGTANFLKSLS 111          
BLAST of FC931509 vs. ExPASy Swiss-Prot
Match: HTPG_PHOPR (Chaperone protein htpG OS=Photobacterium profundum GN=htpG PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 3.269e-22
Identity = 50/106 (47.17%), Postives = 76/106 (71.70%), Query Frame = 2
Query:  128 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 445
            ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L+     +   ++ + +  +    +L++ D+GIGM + D++ +LGTIA+SGTK+F   L+
Sbjct:   11 ETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSQPDLFENDADIGVKLSFNAEAGTLTVSDNGIGMNRDDVIEHLGTIAKSGTKDFFSKLS 116          
BLAST of FC931509 vs. ExPASy Swiss-Prot
Match: HTPG_MYCVP (Chaperone protein htpG OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=htpG PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 3.269e-22
Identity = 55/115 (47.83%), Postives = 77/115 (66.96%), Query Frame = 2
Query:  113 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGAD 457
            MA+  E   FQAE  QLL L+I++ YSNK+ FLREL+SN+SDALDK+R ES  +K       +L I I  DK   +L++ D+GIGMT+ ++V+ +GT+A+SGT E  + L    D
Sbjct:    1 MAAHVEQLEFQAEARQLLDLMIHSVYSNKDSFLRELVSNASDALDKLRLESFRNKDLDVDTSDLHIEIDVDKEARTLTVRDNGIGMTRDEVVSLIGTLAKSGTGELRQQLREAKD 115          
BLAST of FC931509 vs. ExPASy Swiss-Prot
Match: HTPG_SALAI (Chaperone protein htpG OS=Salinispora arenicola (strain CNS-205) GN=htpG PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 4.270e-22
Identity = 54/110 (49.09%), Postives = 75/110 (68.18%), Query Frame = 2
Query:  128 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGAD 457
            ET  FQAE  QLL L++++ YSNK++FLRELISN+SDALDK+R  S+ DK       +L I I  D+   +L++ D+GIGMT+ ++V  +GTIA+SGT E +  L    D
Sbjct:    4 ETLEFQAEARQLLQLMVHSIYSNKDVFLRELISNASDALDKLRLASMRDKDLDVDTSDLHIAIEVDQDARTLTVRDNGIGMTRDEVVQVIGTIAKSGTAELLRKLRETTD 113          
The following BLAST results are available for this feature:
BLAST of FC931509 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
HTPG_PROVI2.503e-2251.43Chaperone protein htpG OS=Prosthecochloris vibriof... [more]
HTPG_OCEIH2.503e-2251.55Chaperone protein htpG OS=Oceanobacillus iheyensis... [more]
HTPG_BACLD2.503e-2252.53Chaperone protein htpG OS=Bacillus licheniformis (... [more]
HTPG_ALKMQ2.503e-2255.67Chaperone protein htpG OS=Alkaliphilus metalliredi... [more]
HTPG_VIBSL3.269e-2248.11Chaperone protein htpG OS=Vibrio splendidus (strai... [more]
HTPG_TREPA3.269e-2253.40Chaperone protein htpG OS=Treponema pallidum GN=ht... [more]
HTPG_RICM53.269e-2247.75Chaperone protein htpG OS=Rickettsia massiliae (st... [more]
HTPG_PHOPR3.269e-2247.17Chaperone protein htpG OS=Photobacterium profundum... [more]
HTPG_MYCVP3.269e-2247.83Chaperone protein htpG OS=Mycobacterium vanbaaleni... [more]
HTPG_SALAI4.270e-2249.09Chaperone protein htpG OS=Salinispora arenicola (s... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34105H04EF PostHarvP1 Citrus clementina cDNA clone C34105H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931509 ID=FC931509; Name=FC931509; organism=Citrus clementina; type=EST; length=463bp
GACTAACTCTCTGCGTTTTTTCTCTCTCTCTCTCTGTCTCTCGTTCGCTT
CCAAAAACCCTTGTTTATAACTCAGAAGAGATCGTTTTTTGGTTGAACGG
CAGGTCGTTTCGATGGCATCAGAGACAGAGACGTTTGCCTTTCAGGCTGA
GATCAACCAGTTGTTGAGTTTGATCATCAACACCTTTTACAGTAACAAGG
AGATCTTTCTTCGTGAGCTCATCAGCAACTCCTCCGATGCATTGGATAAG
ATCAGATTTGAAAGCTTGACAGACAAGAGCAAGCTAGATGCCCAACCAGA
GCTTTTCATTCACATTATCCCTGATAAGACCAACAACTCATTGTCTATTA
TTGACAGTGGTATTGGCATGACTAAGGCTGATTTGGTGAACAACCTTGGT
ACAATTGCTAGGTCTGGGACCAAAGAGTTCATGGAGGCATTGGCTGCTGG
GGCGGATGTGAGC
back to top