FC931509

Overview
NameFC931509
Unique NameFC931509
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length463
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC931509_ssr21 microsatellite FC931509_ssr21:21..34. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig10211 contig Ccv1_Contig10211:5..467. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931509 vs. ExPASy Swiss-Prot
Match: ENPL_BOVIN (Endoplasmin OS=Bos taurus GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 4.260e-30
Identity = 64/114 (56.14%), Postives = 85/114 (74.56%), Query Frame = 2
Query:  101 QVVSMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 442
            Q+  +  ++E FAFQAE+N+++ LIIN+ Y NKEIFLRELISN+SDALDKIR  SLTD++ L    EL + I  DK  N L + D+G+GMT+ +LV NLGTIA+SGT EF+  +
Sbjct:   65 QIRELREKSEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKM 178          
BLAST of FC931509 vs. ExPASy Swiss-Prot
Match: ENPL_RAT (Endoplasmin OS=Rattus norvegicus GN=Hsp90b1 PE=1 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 9.491e-30
Identity = 63/114 (55.26%), Postives = 85/114 (74.56%), Query Frame = 2
Query:  101 QVVSMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 442
            Q+  +  ++E FAFQAE+N+++ LIIN+ Y NKEIFLRELISN+SDALDKIR  SLTD++ L    EL + I  D+  N L + D+G+GMT+ +LV NLGTIA+SGT EF+  +
Sbjct:   65 QIRELREKSEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEELTVKIKCDREKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKM 178          
BLAST of FC931509 vs. ExPASy Swiss-Prot
Match: ENPL_HORVU (Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 9.491e-30
Identity = 72/138 (52.17%), Postives = 96/138 (69.57%), Query Frame = 2
Query:   71 LRRDRFLVERQVVSMASET-----ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA--QPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 463
            L  D  +V+R+  S++ +T     E F FQAE+++L+ +IIN+ YSNK+IFLRELISN+SDALDKIRF +LTDK  +      +L I I  DK N  LSI D G+GMTK DL+ NLGTIA+SGT  F+E +  G D++
Sbjct:   54 LSTDSEVVQRESESISRKTLRNSAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLALTDKEVMGEGDTAKLEIQIKLDKENKILSIRDRGVGMTKEDLIKNLGTIAKSGTSAFVEKMQTGGDLN 191          
BLAST of FC931509 vs. ExPASy Swiss-Prot
Match: ENPL_ARATH (Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 2.761e-29
Identity = 73/138 (52.90%), Postives = 94/138 (68.12%), Query Frame = 2
Query:   71 LRRDRFLVERQVVSMASET-----ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA--QPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 463
            L  D  +V R+  SM+ +T     E F FQAE+++L+ +IIN+ YSNK+IFLRELISN+SDALDKIRF +LTDK  L      +L I I  DK    LSI D GIGMTK DL+ NLGTIA+SGT  F+E + +  D++
Sbjct:   53 LSTDSDVVHRESESMSKKTLRSNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLALTDKDVLGEGDTAKLEIQIKLDKAKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQSSGDLN 190          
BLAST of FC931509 vs. ExPASy Swiss-Prot
Match: HTPG_THICR (Chaperone protein htpG OS=Thiomicrospira crunogena (strain XCL-2) GN=htpG PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 3.606e-29
Identity = 62/106 (58.49%), Postives = 85/106 (80.19%), Query Frame = 2
Query:  119 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFME 436
            S TET AFQ E+NQLL L+I+  YSNKEIFLREL+SN+SDALDK+RFES+++ +  + + EL I +  DK   ++SIID+GIGMT+ +++ N+GTIA SGTK+F+E
Sbjct:    2 SHTETHAFQTEVNQLLKLMIHALYSNKEIFLRELVSNASDALDKLRFESVSNDALSEGESELAIQVGFDKEARTVSIIDNGIGMTRDEVIANIGTIANSGTKKFLE 107          
BLAST of FC931509 vs. ExPASy Swiss-Prot
Match: ENPL_DICDI (Endoplasmin homolog OS=Dictyostelium discoideum GN=grp94 PE=2 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 3.606e-29
Identity = 69/125 (55.20%), Postives = 89/125 (71.20%), Query Frame = 2
Query:   95 ERQVVSMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKL--DAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 463
            E +   +  + E F FQ E+N+L+++IIN+ YS KEIFLRELISN+SDALDKIRF +LT+   L    Q  L IHI  DK NN L I D G+GMTK +LV NLGTIA+SGTKEF++ ++  A+ S
Sbjct:   39 EAEAKLIEEKGEKFTFQTEVNKLMNIIINSLYSKKEIFLRELISNASDALDKIRFLALTNADLLGEGEQSNLDIHIKIDKANNVLHITDRGVGMTKDELVRNLGTIAQSGTKEFIKKVSDSAESS 163          
BLAST of FC931509 vs. ExPASy Swiss-Prot
Match: HTPG_NITEU (Chaperone protein htpG OS=Nitrosomonas europaea GN=htpG PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 6.152e-29
Identity = 61/109 (55.96%), Postives = 85/109 (77.98%), Query Frame = 2
Query:  116 ASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 442
            A   E   FQAE NQLL L+I++ YSNKEIFLRELISN+SDA DK+RFE L+D +  ++ P+L I I  DK   +++IID+GIGM++ +++NN+GTIA+SGT+EF ++L
Sbjct:    4 AENIEHLNFQAEANQLLKLMIHSLYSNKEIFLRELISNASDAADKLRFEGLSDAALYESDPDLKIRIAYDKEARTITIIDNGIGMSRQEVINNIGTIAKSGTREFFDSL 112          
BLAST of FC931509 vs. ExPASy Swiss-Prot
Match: ENPL_CATRO (Endoplasmin homolog OS=Catharanthus roseus GN=HSP90 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 8.034e-29
Identity = 72/138 (52.17%), Postives = 93/138 (67.39%), Query Frame = 2
Query:   71 LRRDRFLVERQVVSMA-----SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA--QPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 463
            L  D  + +R+  SM+     S+ E F FQAE+++L+ +IIN+ YSNK+IFLRELISN+SDALDKIRF +LTDK  L      +L I I  DK    LSI D GIGMTK DL+ NLGTIA+SGT  F+E +    D++
Sbjct:   54 LSTDSDVAKREAESMSMRNLRSDAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLALTDKEILGEGDTAKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLN 191          
BLAST of FC931509 vs. ExPASy Swiss-Prot
Match: HTPG_HALHL (Chaperone protein htpG OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=htpG PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 1.790e-28
Identity = 59/112 (52.68%), Postives = 87/112 (77.68%), Query Frame = 2
Query:  107 VSMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 442
            +S  +++ET  FQAE+ QLLSL+I++ YSN+E+FLRELISN+SDA+DK+RFE+L  +S  +  PEL I +  D    ++++ID+GIGM++ D++ NLGTIA SGT+ F+E L
Sbjct:    1 MSADTQSETLEFQAEVQQLLSLMIHSVYSNREVFLRELISNASDAIDKLRFEALQQESLYEDDPELKIRVEADPEARTVTVIDNGIGMSREDVIENLGTIAHSGTRRFLEQL 112          
BLAST of FC931509 vs. ExPASy Swiss-Prot
Match: HTPG_ALHEH (Chaperone protein htpG OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=htpG PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 5.208e-28
Identity = 59/105 (56.19%), Postives = 83/105 (79.05%), Query Frame = 2
Query:  128 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 442
            ET  FQAE+ QLL L+I++ YSNK+IFLRELISN+SDA+DK+RF+SL D+S L+ + +L I +  DK   ++++ D+GIGMT+ ++  NLGTIARSGTK F++ L
Sbjct:    8 ETLEFQAEVQQLLHLMIHSLYSNKDIFLRELISNASDAIDKLRFQSLQDESLLEGEGDLRIRVSVDKDARTITVADNGIGMTRDEVAENLGTIARSGTKAFLDQL 112          
The following BLAST results are available for this feature:
BLAST of FC931509 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
ENPL_BOVIN4.260e-3056.14Endoplasmin OS=Bos taurus GN=HSP90B1 PE=2 SV=1[more]
ENPL_RAT9.491e-3055.26Endoplasmin OS=Rattus norvegicus GN=Hsp90b1 PE=1 S... [more]
ENPL_HORVU9.491e-3052.17Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1[more]
ENPL_ARATH2.761e-2952.90Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD... [more]
HTPG_THICR3.606e-2958.49Chaperone protein htpG OS=Thiomicrospira crunogena... [more]
ENPL_DICDI3.606e-2955.20Endoplasmin homolog OS=Dictyostelium discoideum GN... [more]
HTPG_NITEU6.152e-2955.96Chaperone protein htpG OS=Nitrosomonas europaea GN... [more]
ENPL_CATRO8.034e-2952.17Endoplasmin homolog OS=Catharanthus roseus GN=HSP9... [more]
HTPG_HALHL1.790e-2852.68Chaperone protein htpG OS=Halorhodospira halophila... [more]
HTPG_ALHEH5.208e-2856.19Chaperone protein htpG OS=Alkalilimnicola ehrliche... [more]

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Properties
Property NameValue
Genbank descriptionC34105H04EF PostHarvP1 Citrus clementina cDNA clone C34105H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931509 ID=FC931509; Name=FC931509; organism=Citrus clementina; type=EST; length=463bp
GACTAACTCTCTGCGTTTTTTCTCTCTCTCTCTCTGTCTCTCGTTCGCTT
CCAAAAACCCTTGTTTATAACTCAGAAGAGATCGTTTTTTGGTTGAACGG
CAGGTCGTTTCGATGGCATCAGAGACAGAGACGTTTGCCTTTCAGGCTGA
GATCAACCAGTTGTTGAGTTTGATCATCAACACCTTTTACAGTAACAAGG
AGATCTTTCTTCGTGAGCTCATCAGCAACTCCTCCGATGCATTGGATAAG
ATCAGATTTGAAAGCTTGACAGACAAGAGCAAGCTAGATGCCCAACCAGA
GCTTTTCATTCACATTATCCCTGATAAGACCAACAACTCATTGTCTATTA
TTGACAGTGGTATTGGCATGACTAAGGCTGATTTGGTGAACAACCTTGGT
ACAATTGCTAGGTCTGGGACCAAAGAGTTCATGGAGGCATTGGCTGCTGG
GGCGGATGTGAGC
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