FC931510
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931510 vs. ExPASy Swiss-Prot
Match: RAB5B_PONAB (Ras-related protein Rab-5B OS=Pongo abelii GN=RAB5B PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.916e-19 Identity = 57/161 (35.40%), Postives = 88/161 (54.66%), Query Frame = 1 Query: 118 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTTGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKN-RQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKL 591 FKLV++G+ GK++ V R + G+F + E T G + ++F WDTAGQE++ L YY Q AI+++D+T + T+ TW ++L R +I I L GNK D+ N R V+ ++ + N L + E SAK+ N FL +A+KL Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181
BLAST of FC931510 vs. ExPASy Swiss-Prot
Match: RAB5B_MOUSE (Ras-related protein Rab-5B OS=Mus musculus GN=Rab5b PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.916e-19 Identity = 57/161 (35.40%), Postives = 88/161 (54.66%), Query Frame = 1 Query: 118 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTTGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKN-RQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKL 591 FKLV++G+ GK++ V R + G+F + E T G + ++F WDTAGQE++ L YY Q AI+++D+T + T+ TW ++L R +I I L GNK D+ N R V+ ++ + N L + E SAK+ N FL +A+KL Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181
BLAST of FC931510 vs. ExPASy Swiss-Prot
Match: RAB5B_HUMAN (Ras-related protein Rab-5B OS=Homo sapiens GN=RAB5B PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.916e-19 Identity = 57/161 (35.40%), Postives = 88/161 (54.66%), Query Frame = 1 Query: 118 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTTGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKN-RQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKL 591 FKLV++G+ GK++ V R + G+F + E T G + ++F WDTAGQE++ L YY Q AI+++D+T + T+ TW ++L R +I I L GNK D+ N R V+ ++ + N L + E SAK+ N FL +A+KL Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181
BLAST of FC931510 vs. ExPASy Swiss-Prot
Match: RAB10_DISOM (Ras-related protein Rab-10 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.916e-19 Identity = 55/185 (29.73%), Postives = 98/185 (52.97%), Query Frame = 1 Query: 118 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTTGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-RVCENIPIVLCGNKVDVKNRQV--KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDLA 663 FKL+++GD G GKT + R F + T G++ + KI+ WDTAGQE+F + YY ++++D+T +++N+ W R++ E++ +L GNK D+++++V K+K R+ ++++E SAK+N N EK FL LA + ++P P +D++ Sbjct: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVLKSKGEQIAREHAIRFFETSAKANINIEKAFLTLAEDI-------LQKTPVKEPDRENVDIS 187
BLAST of FC931510 vs. ExPASy Swiss-Prot
Match: RAB19_RAT (Ras-related protein Rab-19 OS=Rattus norvegicus GN=Rab19 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.269e-19 Identity = 57/176 (32.39%), Postives = 95/176 (53.98%), Query Frame = 1 Query: 97 QTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTTGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV-CENIPIVLCGNKVDV-KNRQVKAKQVTFHRKKN--LQYYEISAKSNYNFEKPFLYLARKLAGDPNLH 612 + VDY FK++++GD GKT V+ +G + + + T GV+ + K++ WDTAGQE+F + YY AII +D+T R T+++VP W ++ + N+ I+L GNK D+ + R V + +K L E SAK + N ++ F+ +A++L +LH Sbjct: 12 ENVDY-LFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKSDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESRNIDEVFVLMAKELIARNSLH 186
BLAST of FC931510 vs. ExPASy Swiss-Prot
Match: YPTV5_VOLCA (GTP-binding protein yptV5 OS=Volvox carteri GN=YPTV5 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.269e-19 Identity = 56/196 (28.57%), Postives = 95/196 (48.47%), Query Frame = 1 Query: 121 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTTGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVDV--KNRQVKAKQVT--FHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDLAAQQHMK 681 K++I+GD G GKT+ + +++ +F K+Y+ T G + + + K+ WDTAGQE+F L +Y C +++FDV ++ ++ W + +N P V+ GNK+D NRQV K+ K ++ Y+E SAK + N E F + R + E P V ++ +A Q + Sbjct: 10 KIIILGDSGVGKTSLMNQYVQKKFTKEYKATIGADFLTKEIEVDDKKVTMQIWDTAGQERFQSLGSAFYRGADCCMLVFDVNNAKSFDDLDNWRDEFIIQAGPSDPDNFPFVVLGNKIDEVGVNRQVTEKKAKAWCASKGSIPYFETSAKEDINVEAAFTCITRNALRNEK----EEELFVPDAVDMNTSATQRKR 201
BLAST of FC931510 vs. ExPASy Swiss-Prot
Match: RB11A_DICDI (Ras-related protein Rab-11A OS=Dictyostelium discoideum GN=rab11A PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.269e-19 Identity = 63/211 (29.86%), Postives = 107/211 (50.71%), Query Frame = 1 Query: 91 SQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTTGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAP-PEVQIDLAAQQHMKPSFAQQLASR 711 SQ+ DY +K+V++GD G GK+ + R EF + + T GVE T I+ WDTAGQE++ + YY A++++D+ + TYK+V W +L + NI I+L GNK D+++ R+V + F K L + E SA + N E F + ++ H + P+ + P+ ID + + P+ ++ A++ Sbjct: 6 SQEEYDY-LYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKTIKAQVWDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWILELRENADRNIEIMLVGNKSDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNILTQI-----YHIMSRPSHSTGPQTTIDSNTETIILPTTSEPPAAK 210
BLAST of FC931510 vs. ExPASy Swiss-Prot
Match: RAB7_VIGAC (Ras-related protein Rab7 OS=Vigna aconitifolia PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.269e-19 Identity = 51/188 (27.13%), Postives = 95/188 (50.53%), Query Frame = 1 Query: 121 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTTGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVDV---KNRQVKAKQVT--FHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG---DPNLHFVESPALAPPE 645 K++++GD G GKT+ + +++ +F ++Y+ T G + + + + WDTAGQE+F L +Y C ++ +DV ++ + WH + + + P +L GNK+D+ +R V K+ K N+ Y+E SAK ++N + FL +A+ + +++F P A PE Sbjct: 10 KVIVLGDTGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLAYDVNVMKSFDTLDNWHEEFLKQANPPDPRSFPFILLGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDFNVDAAFLCIAKAALANEHEQDIYFQGIPEAAVPE 197
BLAST of FC931510 vs. ExPASy Swiss-Prot
Match: RAB4B_RAT (Ras-related protein Rab-4B OS=Rattus norvegicus GN=Rab4b PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.269e-19 Identity = 63/211 (29.86%), Postives = 109/211 (51.66%), Query Frame = 1 Query: 97 QTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTTGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDV-KNRQVKAKQVT-FHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQI-----DLAAQQHMKPSFAQQLA 705 +T D+ FK +++G GTGK+ + + + +F++ T GVE ++ WDTAGQE+F + YY A++++D+T+R TY ++ W D + NI ++LCGNK D+ R+V + + F ++ L + E SA + N E+ FL AR + L+ ++S L P + D++ +Q +P AQ +A Sbjct: 3 ETYDF-LFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTI-----LNKIDSGELDPERMGSGIQYGDISLRQLRQPRSAQAVA 207
BLAST of FC931510 vs. ExPASy Swiss-Prot
Match: RAB4B_MOUSE (Ras-related protein Rab-4B OS=Mus musculus GN=Rab4b PE=2 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 4.269e-19 Identity = 63/211 (29.86%), Postives = 109/211 (51.66%), Query Frame = 1 Query: 97 QTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTTGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDV-KNRQVKAKQVT-FHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQI-----DLAAQQHMKPSFAQQLA 705 +T D+ FK +++G GTGK+ + + + +F++ T GVE ++ WDTAGQE+F + YY A++++D+T+R TY ++ W D + NI ++LCGNK D+ R+V + + F ++ L + E SA + N E+ FL AR + L+ ++S L P + D++ +Q +P AQ +A Sbjct: 3 ETYDF-LFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTI-----LNKIDSGELDPERMGSGIQYGDISLRQLRQPRSAQAVA 207 The following BLAST results are available for this feature:
BLAST of FC931510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931510 ID=FC931510; Name=FC931510; organism=Citrus clementina; type=EST; length=752bpback to top |