FC931510
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931510 vs. ExPASy Swiss-Prot
Match: RAB18_DICDI (Ras-related protein Rab-18 OS=Dictyostelium discoideum GN=rab18 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.269e-19 Identity = 56/165 (33.94%), Postives = 88/165 (53.33%), Query Frame = 1 Query: 118 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTTGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC--ENIPIVLCGNKVDVKNRQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDP 603 +K++++GD GKT+ VKR F++ T GVE + + K+ WDTAGQEKF L YY I+ +DVT R ++ N+ W ++ N+ +L GNK+D +NR+V ++ F +KK + + E SAKS ++ F LA+K+ P Sbjct: 7 YKVLLIGDSDVGKTSIVKRFSDDTFDEDLLCTIGVEFKMKEVKVDGKKVDLCIWDTAGQEKFRALISSYYRGAHGIILTYDVTKRESFDNLNYWLNEVENFANRSNLVKLLVGNKIDKENREVTREEGAEFAKKKAMLFIECSAKSKIGIQQAFEELAQKIIEIP 171
BLAST of FC931510 vs. ExPASy Swiss-Prot
Match: RAB4A_HUMAN (Ras-related protein Rab-4A OS=Homo sapiens GN=RAB4A PE=1 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 5.576e-19 Identity = 65/208 (31.25%), Postives = 107/208 (51.44%), Query Frame = 1 Query: 97 QTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTTGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDV-KNRQVKAKQVT-FHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQI-----DLAAQQHMKPSFAQ 696 +T D+ FK +++G+ GTGK+ + + + +F+ T GVE ++ WDTAGQE+F + YY A++++D+T+R TY + W D + +NI I+LCGNK D+ +R+V + + F ++ L + E SA + N E+ F+ ARK+ L+ +ES L P + D A +Q P AQ Sbjct: 3 ETYDF-LFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKI-----LNKIESGELDPERMGSGIQYGDAALRQLRSPRRAQ 204
BLAST of FC931510 vs. ExPASy Swiss-Prot
Match: RAB4A_BOVIN (Ras-related protein Rab-4A OS=Bos taurus GN=RAB4A PE=2 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 5.576e-19 Identity = 65/208 (31.25%), Postives = 107/208 (51.44%), Query Frame = 1 Query: 97 QTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTTGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDV-KNRQVKAKQVT-FHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQI-----DLAAQQHMKPSFAQ 696 +T D+ FK +++G+ GTGK+ + + + +F+ T GVE ++ WDTAGQE+F + YY A++++D+T+R TY + W D + +NI I+LCGNK D+ +R+V + + F ++ L + E SA + N E+ F+ ARK+ L+ +ES L P + D A +Q P AQ Sbjct: 3 ETYDF-LFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDTDREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKI-----LNKIESGELDPERMGSGIQYGDAALRQLRSPRRAQ 204
BLAST of FC931510 vs. ExPASy Swiss-Prot
Match: RAB35_RAT (Ras-related protein Rab-35 OS=Rattus norvegicus GN=Rab35 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.576e-19 Identity = 52/153 (33.99%), Postives = 81/153 (52.94%), Query Frame = 1 Query: 118 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTTGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPF 570 FKL+I+GD G GK++ + R F Y T GV+ N K++ WDTAGQE+F + YY I+++DVT+ ++ NV W ++ + C+++ +L GNK D R+V + F + +Q +E SAK N N E+ F Sbjct: 9 FKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMF 161
BLAST of FC931510 vs. ExPASy Swiss-Prot
Match: RAB35_MOUSE (Ras-related protein Rab-35 OS=Mus musculus GN=Rab35 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.576e-19 Identity = 52/153 (33.99%), Postives = 81/153 (52.94%), Query Frame = 1 Query: 118 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTTGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPF 570 FKL+I+GD G GK++ + R F Y T GV+ N K++ WDTAGQE+F + YY I+++DVT+ ++ NV W ++ + C+++ +L GNK D R+V + F + +Q +E SAK N N E+ F Sbjct: 9 FKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMF 161
BLAST of FC931510 vs. ExPASy Swiss-Prot
Match: RAB35_HUMAN (Ras-related protein Rab-35 OS=Homo sapiens GN=RAB35 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.576e-19 Identity = 52/153 (33.99%), Postives = 81/153 (52.94%), Query Frame = 1 Query: 118 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTTGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPF 570 FKL+I+GD G GK++ + R F Y T GV+ N K++ WDTAGQE+F + YY I+++DVT+ ++ NV W ++ + C+++ +L GNK D R+V + F + +Q +E SAK N N E+ F Sbjct: 9 FKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMF 161
BLAST of FC931510 vs. ExPASy Swiss-Prot
Match: RAB1A_DICDI (Ras-related protein Rab-1A OS=Dictyostelium discoideum GN=rab1A PE=2 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 5.576e-19 Identity = 55/165 (33.33%), Postives = 88/165 (53.33%), Query Frame = 1 Query: 118 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTTGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK------NLQYYEISAKSNYNFEKPFLYLARKL 591 FKL+++GD G GK+ + R + + + T GV+ N I+ WDTAGQE+F + YY I+++DVT +LT++NV W +++ R CEN+ +L GNK D+ V K V F+ K + + E SAK + N E+ F+ +A ++ Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEIDRFACENVNKLLVGNKSDL----VAKKVVDFNTAKAFADSLQIPFLETSAKQSTNVEQAFMTMATEI 169
BLAST of FC931510 vs. ExPASy Swiss-Prot
Match: RAB10_PONAB (Ras-related protein Rab-10 OS=Pongo abelii GN=RAB10 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.576e-19 Identity = 55/186 (29.57%), Postives = 96/186 (51.61%), Query Frame = 1 Query: 118 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTTGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-RVCENIPIVLCGNKVDVKNRQV--KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDLAA 666 FKL+++GD G GKT + R F + T G++ KI+ WDTAGQE+F + YY ++++D+T +++N+ W R++ E++ +L GNK D+ +++V K K R+ ++++E SAK+N N EK FL LA + ++P P +D+++ Sbjct: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDI-------LRKTPVKEPNSENVDISS 188
BLAST of FC931510 vs. ExPASy Swiss-Prot
Match: RAB10_MOUSE (Ras-related protein Rab-10 OS=Mus musculus GN=Rab10 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.576e-19 Identity = 55/186 (29.57%), Postives = 96/186 (51.61%), Query Frame = 1 Query: 118 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTTGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-RVCENIPIVLCGNKVDVKNRQV--KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDLAA 666 FKL+++GD G GKT + R F + T G++ KI+ WDTAGQE+F + YY ++++D+T +++N+ W R++ E++ +L GNK D+ +++V K K R+ ++++E SAK+N N EK FL LA + ++P P +D+++ Sbjct: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDI-------LRKTPVKEPNSENVDISS 188
BLAST of FC931510 vs. ExPASy Swiss-Prot
Match: RAB10_HUMAN (Ras-related protein Rab-10 OS=Homo sapiens GN=RAB10 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.576e-19 Identity = 55/186 (29.57%), Postives = 96/186 (51.61%), Query Frame = 1 Query: 118 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTTGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-RVCENIPIVLCGNKVDVKNRQV--KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDLAA 666 FKL+++GD G GKT + R F + T G++ KI+ WDTAGQE+F + YY ++++D+T +++N+ W R++ E++ +L GNK D+ +++V K K R+ ++++E SAK+N N EK FL LA + ++P P +D+++ Sbjct: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDI-------LRKTPVKEPNSENVDISS 188 The following BLAST results are available for this feature:
BLAST of FC931510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931510 ID=FC931510; Name=FC931510; organism=Citrus clementina; type=EST; length=752bpback to top |