FC931513
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931513 vs. ExPASy Swiss-Prot
Match: RLA1_HUMAN (60S acidic ribosomal protein P1 OS=Homo sapiens GN=RPLP1 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.067e-13 Identity = 43/109 (39.45%), Postives = 51/109 (46.79%), Query Frame = 2 Query: 80 EQACTYATLILHDDGIAVTAEKIAALVKAANVQIESYWPSLFAKLAEKKNLDDLILNVG----SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 394 E AC Y+ LILHDD + VT +KI AL+KAA V +E +WP LFAK N+ LI NVG + SDDDMGF LFD Sbjct: 6 ELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
BLAST of FC931513 vs. ExPASy Swiss-Prot
Match: RLA1_BOVIN (60S acidic ribosomal protein P1 OS=Bos taurus GN=RPLP1 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.067e-13 Identity = 43/109 (39.45%), Postives = 51/109 (46.79%), Query Frame = 2 Query: 80 EQACTYATLILHDDGIAVTAEKIAALVKAANVQIESYWPSLFAKLAEKKNLDDLILNVG----SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 394 E AC Y+ LILHDD + VT +KI AL+KAA V +E +WP LFAK N+ LI NVG + SDDDMGF LFD Sbjct: 6 ELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
BLAST of FC931513 vs. ExPASy Swiss-Prot
Match: RLA1_ALTAL (60S acidic ribosomal protein P1 OS=Alternaria alternata GN=ALTA12 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.351e-12 Identity = 41/106 (38.68%), Postives = 56/106 (52.83%), Query Frame = 2 Query: 80 EQACTYATLILHDDGIAVTAEKIAALVKAANV-QIESYWPSLFAKLAEKKNLDDLILNVGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 394 E A +YA LIL DDG+ +TA+K+ +L+KAA + ++E W +LFAK E K++ DL+LNVGS SD+DMGF LFD Sbjct: 5 ELATSYAALILADDGVDITADKLQSLIKAAKIEEVEPIWTTLFAKALEGKDVKDLLLNVGSGGGAAPLPEALLLRWRAADAAPAAEEKKEEEKEESDEDMGFGLFD 110
BLAST of FC931513 vs. ExPASy Swiss-Prot
Match: RLA1_RAT (60S acidic ribosomal protein P1 OS=Rattus norvegicus GN=Rplp1 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.765e-12 Identity = 42/109 (38.53%), Postives = 51/109 (46.79%), Query Frame = 2 Query: 80 EQACTYATLILHDDGIAVTAEKIAALVKAANVQIESYWPSLFAKLAEKKNLDDLILNVG----SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 394 E AC Y+ LILHDD + VT +KI AL+KAA V +E +WP LFAK N+ LI NVG + S+DDMGF LFD Sbjct: 6 ELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPSAAAAPAEEKKVEAKKEESEESEDDMGFGLFD 114
BLAST of FC931513 vs. ExPASy Swiss-Prot
Match: RLA1_MOUSE (60S acidic ribosomal protein P1 OS=Mus musculus GN=Rplp1 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.765e-12 Identity = 42/109 (38.53%), Postives = 51/109 (46.79%), Query Frame = 2 Query: 80 EQACTYATLILHDDGIAVTAEKIAALVKAANVQIESYWPSLFAKLAEKKNLDDLILNVG----SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 394 E AC Y+ LILHDD + VT +KI AL+KAA V +E +WP LFAK N+ LI NVG + S+DDMGF LFD Sbjct: 6 ELACIYSALILHDDEVTVTEDKINALIKAAGVSVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGAAPSTAAAPAEEKKVEAKKEESEESEDDMGFGLFD 114
BLAST of FC931513 vs. ExPASy Swiss-Prot
Match: RLA1_OSCBR (60S acidic ribosomal protein P1 OS=Oscheius brevesophaga GN=rpl-21 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.011e-12 Identity = 41/107 (38.32%), Postives = 53/107 (49.53%), Query Frame = 2 Query: 80 EQACTYATLILHDDGIAVTAEKIAALVKAANVQIESYWPSLFAKLAEKKNLDDLILNV--GSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 394 E AC YA LIL DD +A+T +KIA L+KAAN++ E +WP LFAK E ++ +LI +V G+ SDDDMGF L D Sbjct: 6 ELACVYAALILQDDEVAITGDKIATLLKAANIEFEPFWPGLFAKALEGVDVKNLITSVSSGASAGPAQAAAAAPAGGAPAAAAPAESKEGRRSQGESDDDMGFGLLD 112
BLAST of FC931513 vs. ExPASy Swiss-Prot
Match: RLA1_CHICK (60S acidic ribosomal protein P1 OS=Gallus gallus GN=RPLP1 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.011e-12 Identity = 42/109 (38.53%), Postives = 51/109 (46.79%), Query Frame = 2 Query: 80 EQACTYATLILHDDGIAVTAEKIAALVKAANVQIESYWPSLFAKLAEKKNLDDLILNV----GSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 394 E AC Y+ LILHDD + VT +KI AL+KAA V +E +WP LFAK ++ LI NV G+ SDDDMGF LFD Sbjct: 6 ELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANIDIGSLICNVGAGGGAPAAAAPAGGAAPAGGGAAPAEEKKEEEKKEESEESDDDMGFGLFD 114
BLAST of FC931513 vs. ExPASy Swiss-Prot
Match: RLA1_DICDI (60S acidic ribosomal protein P1 OS=Dictyostelium discoideum GN=rplp1 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.932e-12 Identity = 40/110 (36.36%), Postives = 54/110 (49.09%), Query Frame = 2 Query: 68 IMAGEQACTYATLILHDDGIAVTAEKIAALVKAANVQIESYWPSLFAKLAEKKNLDDLILNVG-SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 394 I E AC Y+ L+L DDGI +TA+KI L++AAN+ + S+WP L+A+ K N+ +L+LN G S SDDDMG LFD Sbjct: 4 IKTEELACIYSGLLLQDDGIEITADKIKTLLEAANITVASHWPGLYARSLAKVNIPELLLNAGSSGAAGAAPVAAATSAAAPAAAAKKETKKEEVKKEESDDDMGMGLFD 113
BLAST of FC931513 vs. ExPASy Swiss-Prot
Match: RLA1_ARTSA (60S acidic ribosomal protein P1 OS=Artemia salina PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 5.136e-12 Identity = 38/105 (36.19%), Postives = 48/105 (45.71%), Query Frame = 2 Query: 80 EQACTYATLILHDDGIAVTAEKIAALVKAANVQIESYWPSLFAKLAEKKNLDDLILNVGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 394 E AC YA LIL DD + +T EK+ +++AA V +E YWP LF K E +L +I NVGS D+DMGF LFD Sbjct: 6 ELACVYAALILLDDDVDITTEKVNTILRAAGVSVEPYWPGLFTKALEGLDLKSMITNVGSGVGAAPAAGGAAAATEAPAAKEEKKEEKKEESEEEDEDMGFGLFD 110
BLAST of FC931513 vs. ExPASy Swiss-Prot
Match: RLA3_SCHPO (60S acidic ribosomal protein P1-alpha 3 OS=Schizosaccharomyces pombe GN=rpa3 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.707e-12 Identity = 40/108 (37.04%), Postives = 56/108 (51.85%), Query Frame = 2 Query: 74 AGEQACTYATLILHDDGIAVTAEKIAALVKAANVQIESYWPSLFAKLAEKKNLDDLILNVGS-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 394 A E A +Y+ LIL D+GI +T++K+ +L KAANV +E W ++FAK E K+L +L+LN+GS SD+DMGF LFD Sbjct: 3 ASELATSYSALILADEGIEITSDKLLSLTKAANVDVEPIWATIFAKALEGKDLKELLLNIGSAAAAPAAGGAGAPAAAAGGEAAAEEQKEEAKEEEESDEDMGFGLFD 110 The following BLAST results are available for this feature:
BLAST of FC931513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931513 ID=FC931513; Name=FC931513; organism=Citrus clementina; type=EST; length=576bpback to top |