FC931516

Overview
NameFC931516
Unique NameFC931516
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length748
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13513 contig Ccv1_Contig13513:176..923. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931516 vs. ExPASy Swiss-Prot
Match: COABC_SYNY3 (Coenzyme A biosynthesis bifunctional protein coaBC OS=Synechocystis sp. (strain PCC 6803) GN=coaBC PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.411e-14
Identity = 56/151 (37.09%), Postives = 76/151 (50.33%), Query Frame = 2
Query:  296 RILLAASGSVAAIKFGNLC-HCFSEWAEVRAVATKSSLHFIDRAALPKDVIF--YTDEDEWATWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYNKPLFVAPAMNTFMWNNPFTERHLMSIDELGISLIHL 739
            RIL+   G +AA K   +    F + AEVR + T  +  F+             Y D D    W  I    LHI+L  WADI +IAPL+A+TL K+  G  D+LL+  V A   + P+ +APAMNT MW     +R+L  +  LG    HL
Sbjct:    6 RILIGVGGGIAAYKICEVVSQLFQQGAEVRVILTAEAEKFVTPLTFTTLARHPAYGDAD---FWQPIHHRPLHIDLGEWADIFLIAPLTAHTLAKLGHGFADDLLSNTVLA--SSCPILLAPAMNTDMWEQEAVQRNLQQL--LGDRRYHL 149          
BLAST of FC931516 vs. ExPASy Swiss-Prot
Match: COAC_STRMU (Probable phosphopantothenoylcysteine decarboxylase OS=Streptococcus mutans GN=coaC PE=3 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.406e-14
Identity = 52/148 (35.14%), Postives = 78/148 (52.70%), Query Frame = 2
Query:  296 RILLAASGSVAAIKFGNLCHCFSEWA-EVRAVATKSSLHFIDRAALP---KDVIFYT--DEDEWATWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYNKPLFVAPAMNTFMWNNPFTERHLMSIDELG 721
            +ILLA SGS+AA K  +L H  ++    V  + T ++  FI    L    K+ ++     ED+    N       HI L + AD+ ++AP SANTL  +A G  DN++T +  A     P F APAMNT M+ NP T+ ++  + + G
Sbjct:    4 KILLAVSGSIAAYKAADLSHQLTKLGYHVNVLMTNAAKQFIPPLTLQVLSKNPVYSNVMKEDDPQVIN-------HIALAKQADLFLLAPASANTLAHLAHGFADNIVTSVALALPLEVPKFFAPAMNTKMYENPITQSNIALLKKFG 144          
BLAST of FC931516 vs. ExPASy Swiss-Prot
Match: COABC_VIBF1 (Coenzyme A biosynthesis bifunctional protein coaBC OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=coaBC PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.475e-13
Identity = 51/155 (32.90%), Postives = 85/155 (54.84%), Query Frame = 2
Query:  296 RILLAASGSVAAIKFGNLCHCFSE-WAEVRAVATKSSLHFIDRAALPKDVIFYTDEDEWATWNKIGDSVL---------HIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYNKPLFVAPAMNTFMWNNPFTERHLMSIDELGISL 730
            RILL  SG +AA K   L     E  AEVR V TK++  FI    +           +  + + + DS+L         HIEL +WADI+++AP +A+ + ++A G+ ++LL+ +V A D   P+ V+PAMN  M++N  T+ ++ ++   G+ +
Sbjct:    8 RILLGISGGIAAYKCAELTRRLIERGAEVRVVMTKAAKEFITPLTM-----------QAVSGHPVADSLLDPAAEASMGHIELAKWADIVLLAPATADLIARMAAGMGNDLLSTLVLATD--SPVAVSPAMNQQMYSNIATQENIATLARRGMHI 149          
BLAST of FC931516 vs. ExPASy Swiss-Prot
Match: COABC_VIBVY (Coenzyme A biosynthesis bifunctional protein coaBC OS=Vibrio vulnificus (strain YJ016) GN=coaBC PE=3 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 4.538e-13
Identity = 49/155 (31.61%), Postives = 84/155 (54.19%), Query Frame = 2
Query:  296 RILLAASGSVAAIKFGNLCHCFSE-WAEVRAVATKSSLHFIDRAALPKDVIFYTDEDEWATWNKIGDSVL---------HIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYNKPLFVAPAMNTFMWNNPFTERHLMSIDELGISL 730
            +ILL  SG +AA K  +L     E  AEV+ V TK++  FI    +           +  +   + DS+L         HIEL +WAD++++AP +A+ + ++A G+ ++LLT +V A D   P+ V+PAMN  M+ N  T+ ++ ++   G+ +
Sbjct:    8 KILLGISGGIAAYKCADLTRRLKERGAEVQVVMTKAAKEFITPLTM-----------QAVSGRPVSDSLLDPAAEASMGHIELAKWADLILLAPATADLIARMAAGMGNDLLTTLVLATD--APVAVSPAMNQQMYRNVATQENIATLSRRGMEI 149          
BLAST of FC931516 vs. ExPASy Swiss-Prot
Match: COABC_VIBVU (Coenzyme A biosynthesis bifunctional protein coaBC OS=Vibrio vulnificus GN=coaBC PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.538e-13
Identity = 49/155 (31.61%), Postives = 84/155 (54.19%), Query Frame = 2
Query:  296 RILLAASGSVAAIKFGNLCHCFSE-WAEVRAVATKSSLHFIDRAALPKDVIFYTDEDEWATWNKIGDSVL---------HIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYNKPLFVAPAMNTFMWNNPFTERHLMSIDELGISL 730
            +ILL  SG +AA K  +L     E  AEV+ V TK++  FI    +           +  +   + DS+L         HIEL +WAD++++AP +A+ + ++A G+ ++LLT +V A D   P+ V+PAMN  M+ N  T+ ++ ++   G+ +
Sbjct:    8 KILLGISGGIAAYKCADLTRRLKERGAEVQVVMTKAAKEFITPLTM-----------QAVSGRPVSDSLLDPAAEASMGHIELAKWADLILLAPATADLIARMAAGMGNDLLTTLVLATD--APVAVSPAMNQQMYRNVATQENIATLSRRGMEI 149          
BLAST of FC931516 vs. ExPASy Swiss-Prot
Match: COABC_BACSU (Probable coenzyme A biosynthesis bifunctional protein coaBC OS=Bacillus subtilis GN=coaBC PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.011e-12
Identity = 50/158 (31.65%), Postives = 86/158 (54.43%), Query Frame = 2
Query:  284 LRKPRILLAASGSVAAIKFGNLCHCFSE-WAEVRAVATKSSLHFIDRA---ALPKDVIFYTDEDEWATWNKIGDSVL-HIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYNKPLFVAPAMNTFMWNNPFTERHLMSIDELGISLIHLS 742
            L    +LL  SG +A  K   L     +  A V+ + T+S+  F+      AL +  + YTD     T+ +   SV+ HI+   WAD++++AP +AN +GK+A G+ D++LT  + A     P+++APAMN  M+++P  +R++  + + G   I  S
Sbjct:    2 LNNRNVLLCVSGGIAVYKACALTSKLVQAGANVKVIMTESACRFVSPLTFQALSRHEV-YTD-----TFKEQNPSVISHIDAADWADLIIVAPATANVIGKLANGIADDMLTTTLLA--ATAPVWIAPAMNVHMYDHPAVKRNISVLYQDGYCFIEPS 151          
BLAST of FC931516 vs. ExPASy Swiss-Prot
Match: COABC_VIBPA (Coenzyme A biosynthesis bifunctional protein coaBC OS=Vibrio parahaemolyticus GN=coaBC PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.553e-12
Identity = 47/155 (30.32%), Postives = 84/155 (54.19%), Query Frame = 2
Query:  296 RILLAASGSVAAIKFGNLCHCFSE-WAEVRAVATKSSLHFIDRAALPKDVIFYTDEDEWATWNKIGDSVL---------HIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYNKPLFVAPAMNTFMWNNPFTERHLMSIDELGISL 730
            +ILL  SG +AA K   L     E  A+V+ V TK++  FI    +           +  +   + DS+L         HIEL +WAD++++AP +A+ + +++ G+ ++LLT +V A D   P+ V+PAMN  M+ N  T+ ++ ++   G+++
Sbjct:    8 KILLGISGGIAAYKCAELTRRLIERGAQVQVVMTKAAKEFITPLTM-----------QAVSGRPVSDSLLDPAAEASMGHIELAKWADLVLLAPATADLIARMSAGMGNDLLTTLVLATD--SPVAVSPAMNQQMYRNIATQENIATLARRGMNI 149          
BLAST of FC931516 vs. ExPASy Swiss-Prot
Match: COABC_HAEIN (Coenzyme A biosynthesis bifunctional protein coaBC OS=Haemophilus influenzae GN=coaBC PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.553e-12
Identity = 50/160 (31.25%), Postives = 82/160 (51.25%), Query Frame = 2
Query:  284 LRKPRILLAASGSVAAIKFGNLCHCFSEW-AEVRAVATKSSLHFIDRAALPKDVIFYTDEDEWATWNKIGDSVL---------HIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYNKPLFVAPAMNTFMWNNPFTERHLMSIDELGISLI 733
            L    I++  +G +AA K   L     +  AEVR V T ++  F+    L           +  + N +  S+L         HIEL +WAD ++IAP SA+ + ++  G+ ++LL+ I  A   N P+F+APAMN  M++   T+++L ++   GI LI
Sbjct:    3 LNGKHIVVGITGGIAAYKTIELIRLLRKAEAEVRVVLTPAAAEFVTPLTL-----------QAISGNAVSQSLLDPQAELAMGHIELAKWADAIIIAPASADFIARLTIGMANDLLSTICLA--TNAPIFLAPAMNQQMYHQSITQQNLTTLQTRGIELI 149          
BLAST of FC931516 vs. ExPASy Swiss-Prot
Match: MRSD_BACSY (Mersacidin decarboxylase OS=Bacillus sp. (strain HIL-Y85/54728) GN=mrsD PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.490e-11
Identity = 44/147 (29.93%), Postives = 74/147 (50.34%), Query Frame = 2
Query:  284 LRKPRILLAASGSVAAIKFGN-LCHCFSEWAEVRAVATKSSLHFIDRAALPKDVIFYTDEDEWATWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYNKPLFVAPAMNTFMWNNPFTERHLMSIDELG 721
            L+  ++L+   GS++++   + L +  S + E+R V TK++   I     P   + Y  +  ++   + G    H+E+ RWADI  I P +AN LG+ A G+  NL+   V A  +N   F  P MN  MWN     R++  + + G
Sbjct:    6 LKDKKLLIGICGSISSVGISSYLLYFKSFFKEIRVVMTKTAEDLI-----PAHTVSYFCDHVYSEHGENGKRHSHVEIGRWADIYCIIPATANILGQTANGVAMNLVATTVLAHPHNTIFF--PNMNDLMWNKTVVSRNIEQLRKDG 145          
The following BLAST results are available for this feature:
BLAST of FC931516 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
COABC_SYNY31.411e-1437.09Coenzyme A biosynthesis bifunctional protein coaBC... [more]
COAC_STRMU2.406e-1435.14Probable phosphopantothenoylcysteine decarboxylase... [more]
COABC_VIBF13.475e-1332.90Coenzyme A biosynthesis bifunctional protein coaBC... [more]
COABC_VIBVY4.538e-1331.61Coenzyme A biosynthesis bifunctional protein coaBC... [more]
COABC_VIBVU4.538e-1331.61Coenzyme A biosynthesis bifunctional protein coaBC... [more]
COABC_BACSU1.011e-1231.65Probable coenzyme A biosynthesis bifunctional prot... [more]
COABC_VIBPA6.553e-1230.32Coenzyme A biosynthesis bifunctional protein coaBC... [more]
COABC_HAEIN6.553e-1231.25Coenzyme A biosynthesis bifunctional protein coaBC... [more]
MRSD_BACSY2.490e-1129.93Mersacidin decarboxylase OS=Bacillus sp. (strain H... [more]

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Properties
Property NameValue
Genbank descriptionC34105H12EF PostHarvP1 Citrus clementina cDNA clone C34105H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931516 ID=FC931516; Name=FC931516; organism=Citrus clementina; type=EST; length=748bp
GGTTTTGTCAACGTCGCGGCTGCCGCTCTCTATTTAAAACCCCCCTCGCA
CTCTCTCTACTCTCTAGGTCTAGGCTGCCTCCAAGCCAGCGACCGTTAGT
CGTCGGTTTCCACACTCCGACGCTGCGACGTCGATTGTTGTCTCCCCTCT
GCCGCGCCACTCGTGGATTGCTGTTCTACCACCGCCGGCCGCGGCTGATC
TGATTCATCTCATCTCATGATTGATTATGGCATACTCTGAACCTACAAGT
ACCGATAGGGAGGCGATGCAGGTCAATACTGGTCTGAGGAAACCCCGTAT
TTTACTTGCTGCAAGTGGAAGTGTAGCTGCAATAAAATTTGGGAATCTCT
GTCATTGTTTTTCTGAGTGGGCGGAAGTAAGAGCGGTGGCCACAAAGTCC
TCTCTACACTTCATTGATAGAGCAGCGCTTCCTAAGGATGTGATCTTTTA
CACAGACGAGGATGAATGGGCCACCTGGAACAAAATAGGTGATAGCGTTC
TTCACATCGAGCTCCGCAGATGGGCTGATATTATGGTTATTGCTCCGCTG
TCAGCAAACACACTTGGCAAGATTGCAGGTGGATTGTGTGACAATCTGCT
GACATGCATTGTGCGGGCATGGGACTACAATAAGCCACTGTTTGTTGCAC
CTGCTATGAACACTTTCATGTGGAATAATCCATTCACAGAGCGGCATCTT
ATGTCAATTGATGAGCTTGGAATTTCTCTCATTCACCTGTCTCCAAAA
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