FC931519
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931519 vs. ExPASy Swiss-Prot
Match: EFP_ACIC1 (Elongation factor P OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=efp PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.334e-23 Identity = 49/105 (46.67%), Postives = 72/105 (68.57%), Query Frame = 2 Query: 356 SSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEADVFKETKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWLKE 670 ++ND+K G +++DG W V+EF HVKPGKG AFVRTKL++ ++G V++TF AG+ V+ A V K T Q+ Y++G FVFMD T+++ + VGD +L E Sbjct: 3 TTNDLKNGMTLDLDGELWNVVEFQHVKPGKGPAFVRTKLKHVLTGKVVDKTFNAGVKVDVATVDKRTMQYLYREGDSFVFMDTETYDQYHIPAQTVGDAANFLLE 107
BLAST of FC931519 vs. ExPASy Swiss-Prot
Match: EFP_SALTO (Elongation factor P OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=efp PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.354e-23 Identity = 52/103 (50.49%), Postives = 69/103 (66.99%), Query Frame = 2 Query: 356 SSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEADVFKETKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWL 664 ++ND+K G + +DG W V+EF HVKPGKG AFVRT L+N +SG V++TF AG VE A V K T Q+ Y DG FVFMDL TF+++ + VG+ +L Sbjct: 3 TTNDLKNGMVLNLDGELWAVVEFQHVKPGKGGAFVRTTLKNVLSGKVVDKTFNAGTKVETATVDKRTMQYLYADGEDFVFMDLETFDQINVLGDTVGEAANYL 105
BLAST of FC931519 vs. ExPASy Swiss-Prot
Match: EFP_NOCSJ (Elongation factor P OS=Nocardioides sp. (strain BAA-499 / JS614) GN=efp PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.686e-23 Identity = 51/105 (48.57%), Postives = 72/105 (68.57%), Query Frame = 2 Query: 356 SSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEADVFKETKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWLKE 670 ++ND+K G + +DG W V+EF HVKPGKG AFVRTKL+N S TV++TF AG VE A V + T Q+ Y DGS +VFMD+ +++++ + VG+ K +L E Sbjct: 3 TTNDLKNGMVLNIDGQLWAVVEFQHVKPGKGPAFVRTKLKNVESNKTVDKTFNAGTKVETATVDRRTMQYLYNDGSSYVFMDVQSYDQLEIAPEIVGNAKNFLLE 107
BLAST of FC931519 vs. ExPASy Swiss-Prot
Match: EFP_CLOPS (Elongation factor P OS=Clostridium perfringens (strain SM101 / Type A) GN=efp PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.686e-23 Identity = 52/116 (44.83%), Postives = 75/116 (64.66%), Query Frame = 2 Query: 356 SSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEADVFKETKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWLKEGNGLHLLFLEG 703 S +D++ G+ E+DG + V++FLHVKPGKGAAFVRTKLRN + G +RTF ++EA + ++ Q+ Y DG ++ FMD TFE++ LN V D K+LKE + F +G Sbjct: 3 SGSDLRKGTTFELDGQVYTVIDFLHVKPGKGAAFVRTKLRNVIMGGVTDRTFNPTDKLQEAIIERKEMQYLYSDGELYYFMDQETFEQIPLNHEKVEDAIKFLKENMNAVIKFYKG 118
BLAST of FC931519 vs. ExPASy Swiss-Prot
Match: EFP_CLOPE (Elongation factor P OS=Clostridium perfringens GN=efp PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.686e-23 Identity = 52/116 (44.83%), Postives = 75/116 (64.66%), Query Frame = 2 Query: 356 SSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEADVFKETKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWLKEGNGLHLLFLEG 703 S +D++ G+ E+DG + V++FLHVKPGKGAAFVRTKLRN + G +RTF ++EA + ++ Q+ Y DG ++ FMD TFE++ LN V D K+LKE + F +G Sbjct: 3 SGSDLRKGTTFELDGQVYTVIDFLHVKPGKGAAFVRTKLRNVIMGGVTDRTFNPTDKLQEAIIERKEMQYLYSDGELYYFMDQETFEQIPLNHEKVEDAIKFLKENMNAVIKFYKG 118
BLAST of FC931519 vs. ExPASy Swiss-Prot
Match: EFP_CLOP1 (Elongation factor P OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=efp PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.686e-23 Identity = 52/116 (44.83%), Postives = 75/116 (64.66%), Query Frame = 2 Query: 356 SSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEADVFKETKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWLKEGNGLHLLFLEG 703 S +D++ G+ E+DG + V++FLHVKPGKGAAFVRTKLRN + G +RTF ++EA + ++ Q+ Y DG ++ FMD TFE++ LN V D K+LKE + F +G Sbjct: 3 SGSDLRKGTTFELDGQVYTVIDFLHVKPGKGAAFVRTKLRNVIMGGVTDRTFNPTDKLQEAIIERKEMQYLYSDGELYYFMDQETFEQIPLNHEKVEDAIKFLKENMNAVIKFYKG 118
BLAST of FC931519 vs. ExPASy Swiss-Prot
Match: EFP_CARHZ (Elongation factor P OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=efp PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.686e-23 Identity = 51/115 (44.35%), Postives = 74/115 (64.35%), Query Frame = 2 Query: 356 SSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEADVFKETKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWLKEGNGLHLLFLE 700 S+ND + G IE+DG ++V+EF HVKPGKG+ FVR+KLRN M+G +E+TF AG V +A V + Q+ Y DG F MD+ T+++ L + GD ++KE L +LF + Sbjct: 3 STNDFRTGLTIELDGEVYQVIEFQHVKPGKGSPFVRSKLRNLMTGAVIEKTFNAGEKVPKAHVDRREVQYLYNDGDNFYCMDMETYDQFPLTKEQFGDAINYVKENTNLWVLFFK 117
BLAST of FC931519 vs. ExPASy Swiss-Prot
Match: EFP_CLAMS (Elongation factor P OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=efp PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.427e-23 Identity = 52/116 (44.83%), Postives = 72/116 (62.07%), Query Frame = 2 Query: 356 SSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEADVFKETKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWLKEGNGLHLLFLEG 703 S+ DIK G + +DG W V+EF HVKPGKG AFVRTK++N MSG V+RTF AG +E V + Q+ Y DG FVFMD + ++++ L+ VGD K ++ E + + G Sbjct: 3 STADIKNGVVLNMDGQLWTVIEFQHVKPGKGGAFVRTKVKNVMSGKVVDRTFNAGAKIETETVDRRDFQYLYADGENFVFMDTSDYDQITLSAAQVGDAKNFMLENQDVTVALHNG 118
BLAST of FC931519 vs. ExPASy Swiss-Prot
Match: EFP_CLAM3 (Elongation factor P OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=efp PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.427e-23 Identity = 52/116 (44.83%), Postives = 72/116 (62.07%), Query Frame = 2 Query: 356 SSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEADVFKETKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWLKEGNGLHLLFLEG 703 S+ DIK G + +DG W V+EF HVKPGKG AFVRTK++N MSG V+RTF AG +E V + Q+ Y DG FVFMD + ++++ L+ VGD K ++ E + + G Sbjct: 3 STADIKNGVVLNMDGQLWTVIEFQHVKPGKGGAFVRTKVKNVMSGKVVDRTFNAGAKIETETVDRRDFQYLYADGENFVFMDTSDYDQITLSAAQVGDAKNFMLENQDVTVALHNG 118
BLAST of FC931519 vs. ExPASy Swiss-Prot
Match: EFP_BACHK (Elongation factor P OS=Bacillus thuringiensis subsp. konkukian GN=efp PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.427e-23 Identity = 53/116 (45.69%), Postives = 73/116 (62.93%), Query Frame = 2 Query: 356 SSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEADVFKETKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWLKEGNGLHLLFLEG 703 S ND + G I VD W+VL+F HVKPGKGAAFVR+KLRN +G+ E+TFRAG VE+A + Q+ Y G VFMD T+E++ L E + + K+LKE + ++ +G Sbjct: 3 SVNDFRTGLTIAVDNGLWQVLDFQHVKPGKGAAFVRSKLRNLRTGSVQEKTFRAGEKVEKAHIENRRMQYLYASGEAHVFMDNGTYEQIELGEKQIERELKFLKENMEVSIMTYQG 118 The following BLAST results are available for this feature:
BLAST of FC931519 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 495
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931519 ID=FC931519; Name=FC931519; organism=Citrus clementina; type=EST; length=704bpback to top |