FC931519
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931519 vs. ExPASy Swiss-Prot
Match: EFP_HELPJ (Elongation factor P OS=Helicobacter pylori J99 GN=efp PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.652e-25 Identity = 47/114 (41.23%), Postives = 80/114 (70.18%), Query Frame = 2 Query: 350 AFSSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEADVFKETKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWLKEGNGLHLL 691 A +++K G IE+ G P+R++E+ HVKPGKGAAFVR K+++++ G +E+TF AG EE ++ ++T Q+ Y DG + FMD+ ++E++ LN++ VG+ KW+ +G + +L Sbjct: 2 AIGMSELKKGLKIELGGVPYRIVEYQHVKPGKGAAFVRAKIKSFLDGKVIEKTFHAGDKCEEPNLVEKTMQYLYHDGDTYQFMDIESYEQIALNDSQVGEASKWMLDGMQVQVL 115
BLAST of FC931519 vs. ExPASy Swiss-Prot
Match: EFP_HELPH (Elongation factor P OS=Helicobacter pylori (strain HPAG1) GN=efp PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.652e-25 Identity = 47/114 (41.23%), Postives = 80/114 (70.18%), Query Frame = 2 Query: 350 AFSSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEADVFKETKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWLKEGNGLHLL 691 A +++K G IE+ G P+R++E+ HVKPGKGAAFVR K+++++ G +E+TF AG EE ++ ++T Q+ Y DG + FMD+ ++E++ LN++ VG+ KW+ +G + +L Sbjct: 2 AIGMSELKKGLKIELGGVPYRIVEYQHVKPGKGAAFVRAKIKSFLDGKVIEKTFHAGDKCEEPNLVEKTMQYLYHDGDTYQFMDIESYEQIALNDSQVGEASKWMLDGMQVQVL 115
BLAST of FC931519 vs. ExPASy Swiss-Prot
Match: EFP_HELPG (Elongation factor P OS=Helicobacter pylori (strain G27) GN=efp PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.652e-25 Identity = 47/114 (41.23%), Postives = 80/114 (70.18%), Query Frame = 2 Query: 350 AFSSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEADVFKETKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWLKEGNGLHLL 691 A +++K G IE+ G P+R++E+ HVKPGKGAAFVR K+++++ G +E+TF AG EE ++ ++T Q+ Y DG + FMD+ ++E++ LN++ VG+ KW+ +G + +L Sbjct: 2 AIGMSELKKGLKIELGGVPYRIVEYQHVKPGKGAAFVRAKIKSFLDGKVIEKTFHAGDKCEEPNLVEKTMQYLYHDGDTYQFMDIESYEQIALNDSQVGEASKWMLDGMQVQVL 115
BLAST of FC931519 vs. ExPASy Swiss-Prot
Match: EFP_HELP2 (Elongation factor P OS=Helicobacter pylori (strain P12) GN=efp PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.652e-25 Identity = 47/114 (41.23%), Postives = 80/114 (70.18%), Query Frame = 2 Query: 350 AFSSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEADVFKETKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWLKEGNGLHLL 691 A +++K G IE+ G P+R++E+ HVKPGKGAAFVR K+++++ G +E+TF AG EE ++ ++T Q+ Y DG + FMD+ ++E++ LN++ VG+ KW+ +G + +L Sbjct: 2 AIGMSELKKGLKIELGGVPYRIVEYQHVKPGKGAAFVRAKIKSFLDGKVIEKTFHAGDKCEEPNLVEKTMQYLYHDGDTYQFMDIESYEQIALNDSQVGEASKWMLDGMQVQVL 115
BLAST of FC931519 vs. ExPASy Swiss-Prot
Match: EFP_BACSU (Elongation factor P OS=Bacillus subtilis GN=efp PE=3 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 4.652e-25 Identity = 53/115 (46.09%), Postives = 78/115 (67.83%), Query Frame = 2 Query: 356 SSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEADVFKETKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWLKEGNGLHLLFLE 700 S ND + G IEVDG WRV++F HVKPGKGAAFVR+KLRN +G E+TFRAG V +A + +T Q+ Y +G VFMD +++E++ L+ T + ++ K+L E +H++ + Sbjct: 3 SVNDFRTGLTIEVDGGIWRVVDFQHVKPGKGAAFVRSKLRNLRTGAIQEKTFRAGEKVAKAQIETKTMQYLYANGDQHVFMDTSSYEQLELSATQIEEELKYLLENMSVHIMMYQ 117
BLAST of FC931519 vs. ExPASy Swiss-Prot
Match: EFP_BACP2 (Elongation factor P OS=Bacillus pumilus (strain SAFR-032) GN=efp PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.652e-25 Identity = 54/112 (48.21%), Postives = 77/112 (68.75%), Query Frame = 2 Query: 356 SSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEADVFKETKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWLKEGNGLHLL 691 S ND + G IEVDG WRV++F HVKPGKGAAFVR+KLRN +G E+TFRAG V +A + +T Q+ Y +G VFMD +++E++ L+ET + D+ K+L E + ++ Sbjct: 3 SVNDFRTGLTIEVDGGIWRVVDFQHVKPGKGAAFVRSKLRNLRTGAIQEKTFRAGEKVAKAQIETKTMQYLYANGDQHVFMDTSSYEQLELSETQIKDELKYLLENMSVQIV 114
BLAST of FC931519 vs. ExPASy Swiss-Prot
Match: EFP_MACCJ (Elongation factor P OS=Macrococcus caseolyticus (strain JCSC5402) GN=efp PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.036e-24 Identity = 56/116 (48.28%), Postives = 74/116 (63.79%), Query Frame = 2 Query: 356 SSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEADVFKETKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWLKEGNGLHLLFLEG 703 S ND K G IEVD WRV+EF HVKPGKGAAFVR+KLRN +G E+TFRAG V +A + + Q+ Y G VFMD ++E++ L+E + + K+LKE +H+ EG Sbjct: 3 SVNDFKTGLTIEVDNGIWRVIEFQHVKPGKGAAFVRSKLRNLRTGAIQEKTFRAGEKVGKAQIDNKRMQYLYASGDQHVFMDTESYEQIELSEDTIEYELKFLKENMEVHIQMYEG 118
BLAST of FC931519 vs. ExPASy Swiss-Prot
Match: EFP_GEOTN (Elongation factor P OS=Geobacillus thermodenitrificans (strain NG80-2) GN=efp PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.036e-24 Identity = 56/116 (48.28%), Postives = 74/116 (63.79%), Query Frame = 2 Query: 356 SSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEADVFKETKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWLKEGNGLHLLFLEG 703 S ND + G IEVDG WRVLEF HVKPGKGAAFVR+KLRN +G ERTFRAG V A + Q+ Y +G + VFMD+ T+E++ L + + K+LKE + ++ +G Sbjct: 3 SVNDFRTGLTIEVDGEIWRVLEFQHVKPGKGAAFVRSKLRNLRTGAIQERTFRAGEKVNRAQIDTRKMQYLYANGDLHVFMDMETYEQIELPAKQIEYELKFLKENMEVFIMMYQG 118
BLAST of FC931519 vs. ExPASy Swiss-Prot
Match: EFP_GEOKA (Elongation factor P OS=Geobacillus kaustophilus GN=efp PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.036e-24 Identity = 56/116 (48.28%), Postives = 73/116 (62.93%), Query Frame = 2 Query: 356 SSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEADVFKETKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWLKEGNGLHLLFLEG 703 S ND + G IEVDG WRVLEF HVKPGKGAAFVR+KLRN +G ERTFRAG V A + Q+ Y +G VFMD+ T+E++ L + + K+LKE + ++ +G Sbjct: 3 SVNDFRTGLTIEVDGEIWRVLEFQHVKPGKGAAFVRSKLRNLRTGAIQERTFRAGEKVNRAQIDTRKMQYLYANGDQHVFMDMETYEQIELPAKQIEHELKFLKENMEVFIMMYQG 118
BLAST of FC931519 vs. ExPASy Swiss-Prot
Match: EFP_CAMJR (Elongation factor P OS=Campylobacter jejuni (strain RM1221) GN=efp PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.036e-24 Identity = 50/118 (42.37%), Postives = 80/118 (67.80%), Query Frame = 2 Query: 350 AFSSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEADVFKETKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWLKEGNGLHLLFLEG 703 ++S D+K G IE+DG P++++E+ HVKPGKG AFVR K+++++ G +E+TF AG E ++ +T Q+ Y DG FMD T+E+V +++ DVG+ KKW+ +G + +LF G Sbjct: 3 SYSMGDLKKGLKIEIDGIPFKIVEYQHVKPGKGPAFVRIKIKSFIDGKVLEKTFHAGDKCEAPNLEDKTMQYLYDDGENCQFMDTQTYEQVAISDDDVGEAKKWMLDGMMVDVLFHNG 120 The following BLAST results are available for this feature:
BLAST of FC931519 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 495
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931519 ID=FC931519; Name=FC931519; organism=Citrus clementina; type=EST; length=704bpback to top |