FC931525

Overview
NameFC931525
Unique NameFC931525
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931525 vs. ExPASy Swiss-Prot
Match: SAHH_CORDI (Adenosylhomocysteinase OS=Corynebacterium diphtheriae GN=ahcY PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.260e-40
Identity = 89/186 (47.85%), Postives = 113/186 (60.75%), Query Frame = 1
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH---------XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADP 693
            ++ VKDLS A+ GR +I LAE EMPGLM  R E+   QP  GA+ITGS+HMT+QTAVLIETL ALGA+VRW SCNIFSTQD                        WKGETL+EYW C +K   WG    P++I+DDGGDAT+ +  G +    +E+ G +P     D+ E+Q  L ++R  L   P
Sbjct:    5 DYNVKDLSLAEAGRHQIRLAEYEMPGLMQLREEYQQEQPLAGARITGSIHMTVQTAVLIETLVALGAQVRWASCNIFSTQDEAAAAVVVGPHGTPEDPQGVPVFAWKGETLEEYWDCVDKIFSWG-DELPNMILDDGGDATMAVIRGKQ----FEEAGMVPPVEEGDSDEYQAFLGMLRKTLAEQP 185          
BLAST of FC931525 vs. ExPASy Swiss-Prot
Match: SAHH_RHOSH (Adenosylhomocysteinase OS=Rhodobacter sphaeroides GN=ahcY PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.952e-40
Identity = 85/142 (59.86%), Postives = 101/142 (71.13%), Query Frame = 1
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAE 588
            +F VKDLS ADFGR E+++AE EMPGLMA R EFG S+P KGA+I GSLHMT+QTAVLIETL ALGA+VRW SCNIFSTQDH               KGETL++YW  T+K   +   G  ++I+DDGGDATL I  G + E
Sbjct:    3 DFIVKDLSLADFGRKELDIAETEMPGLMALREEFGASKPLKGARIAGSLHMTVQTAVLIETLVALGADVRWASCNIFSTQDHAAAAIAASGVPVFAIKGETLEDYWAYTDKIFQFA-DGTCNMILDDGGDATLYILLGARVE 143          
BLAST of FC931525 vs. ExPASy Swiss-Prot
Match: SAHH_CHRVO (Adenosylhomocysteinase OS=Chromobacterium violaceum GN=ahcY PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.952e-40
Identity = 89/177 (50.28%), Postives = 112/177 (63.28%), Query Frame = 1
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADP 693
            +F V D++ A +GR E+ +AE EMPGLMA R E+  +QP +GA+I GSLHMT+QTAVLIETLTALGAEVRW SCNIFSTQDH              +KGE+L EYW  + K  +W  G   ++I+DDGGDATLL+  G KAE   +  G +  P    N E   +   I+  L  DP
Sbjct:    6 DFHVADIALAGWGRKELNIAETEMPGLMATRDEYHAAQPLRGARIAGSLHMTVQTAVLIETLTALGAEVRWASCNIFSTQDHAAAAIAAAGIPVFAFKGESLDEYWEFSHKIFEWPEGQPANMILDDGGDATLLLMLGSKAE---KDIGVIAHPT---NEEETALFASIKRHLAIDP 176          
BLAST of FC931525 vs. ExPASy Swiss-Prot
Match: SAHH_PROMA (Adenosylhomocysteinase OS=Prochlorococcus marinus GN=ahcY PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.035e-40
Identity = 83/154 (53.90%), Postives = 102/154 (66.23%), Query Frame = 1
Query:  130 ALSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEE 591
            A S  +     +F V D++ ADFGR E+ +AE EMPGLM+ R ++G  +P +GA+I GSLHMTIQT VLIETL ALGA+VRW SCNIFSTQDH               KGETL EYW  T   L+W    GP++I+DDGGDAT L+  G KAE+
Sbjct:    5 AASTSQVVGDSDFVVADITLADFGRKELAIAEKEMPGLMSLRDKYGQEKPLQGARIAGSLHMTIQTGVLIETLVALGAQVRWASCNIFSTQDHAAAAIAKAGVPVFAKKGETLSEYWSFTHSILEWSGEQGPNMILDDGGDATGLVILGSKAEK 158          
BLAST of FC931525 vs. ExPASy Swiss-Prot
Match: SAHH_CANAL (Adenosylhomocysteinase OS=Candida albicans GN=SAH1 PE=1 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 5.035e-40
Identity = 90/163 (55.21%), Postives = 106/163 (65.03%), Query Frame = 1
Query:  148 SASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKAL-DWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPAST 633
            SA    +KV D+S A FGR +IEL+E EMPGLM  R ++GPSQP KGA+I G LHMTIQTAVLIETL ALGAEV W SCNIFSTQDH              WKGET +EY WC E+ L  +  G   +LI+DDGGD T L+HE  K  E+ E    L +  +T
Sbjct:    3 SAPATNYKVADISLAAFGRKDIELSENEMPGLMYIRKKYGPSQPLKGARIAGCLHMTIQTAVLIETLVALGAEVTWSSCNIFSTQDHAAAAIAAAGVPVFAWKGETEEEYQWCIEQQLFAFKDGKKLNLILDDGGDLTSLVHE--KYPEMLEDCYGLSEETTT 163          
BLAST of FC931525 vs. ExPASy Swiss-Prot
Match: SAHH_NITEU (Adenosylhomocysteinase OS=Nitrosomonas europaea GN=ahcY PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.575e-40
Identity = 92/180 (51.11%), Postives = 111/180 (61.67%), Query Frame = 1
Query:  169 KVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGG--PDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDP---ASTDNAEFQIVLTIIRDGLKADP 693
            KV DLS AD+GR EI +AE EMPGLMA R ++   +P  GA+I GSLHMTIQTAVLIETL ALGAEVRW SCNIFSTQDH              +KGE+L+EYW    +  +W   G    ++I+DDGGDATLL+  G KAE          DP   A+  N E Q++   IR  L + P
Sbjct:   18 KVADLSLADWGRKEIAIAETEMPGLMALREQYADKKPLAGARIAGSLHMTIQTAVLIETLVALGAEVRWASCNIFSTQDHAAAAIAARNIPVFAYKGESLEEYWDYAHQIFEWASDGSHTANMILDDGGDATLLLILGSKAER---------DPSVIANPTNEEEQVLFASIRSRLASHP 188          
BLAST of FC931525 vs. ExPASy Swiss-Prot
Match: SAHH_BURPP (Adenosylhomocysteinase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=ahcY PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.575e-40
Identity = 83/155 (53.55%), Postives = 105/155 (67.74%), Query Frame = 1
Query:  127 MALSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEE 591
            M  +V  S + ++F V D+S AD+GR E+ +AE EMPGL+  R E+   QP KGA+I GSLHMTIQT VLIETLTALGA+VRW SCNIFSTQDH              +KGE+L EYW  + +  +W  G   ++I+DDGGDATLL+  G KAE+
Sbjct:    1 MNAAVIDSKNSQDFVVADMSLADWGRKELNIAETEMPGLVQTREEYKAQQPLKGARIAGSLHMTIQTGVLIETLTALGADVRWASCNIFSTQDHAAAAIAKAGTPVFAFKGESLDEYWEFSHRIFEWPNGEFANMILDDGGDATLLLILGSKAEK 155          
BLAST of FC931525 vs. ExPASy Swiss-Prot
Match: SAHH_BURXL (Adenosylhomocysteinase OS=Burkholderia xenovorans (strain LB400) GN=ahcY PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 8.588e-40
Identity = 92/189 (48.68%), Postives = 117/189 (61.90%), Query Frame = 1
Query:  127 MALSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADP 693
            M  +V  S + ++F V D+S AD+GR E+ +AE EMPGL+  R E+   QP KGA+I GSLHMTIQT VLIETLTALGA+VRW SCNIFSTQDH              +KGE+L EYW  + +  +W  G   ++I+DDGGDATLL+  G KAE+      K      T+  E  +  +I R  L ADP
Sbjct:    1 MNAAVIDSKNSQDFIVADMSLADWGRKELNIAETEMPGLVQTREEYKVQQPLKGARIAGSLHMTIQTGVLIETLTALGADVRWASCNIFSTQDHAAAAIAKAGTPVFAFKGESLDEYWEFSHRIFEWPNGEFANMILDDGGDATLLLILGSKAEKDRSVISK-----PTNEEEVALYKSIERH-LDADP 183          
BLAST of FC931525 vs. ExPASy Swiss-Prot
Match: SAHH_ZYMMO (Adenosylhomocysteinase OS=Zymomonas mobilis GN=ahcY PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.122e-39
Identity = 85/160 (53.12%), Postives = 104/160 (65.00%), Query Frame = 1
Query:  172 VKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQ 651
            V+D+S A +GR EI++AE EMPGLMA R E+   +P KGA+ITGSLHMTIQTAVLIETL  LGAEVRW SCNIFSTQDH               KGE+L+EYW   ++  DWG G   ++I+DDGGDAT+ +  G K E   E     P P + +   FQ
Sbjct:    8 VRDISLAGWGRKEIDIAEGEMPGLMALREEYAAKKPLKGARITGSLHMTIQTAVLIETLVDLGAEVRWASCNIFSTQDHAAAAIAEQNIPVFAVKGESLEEYWDYVDRIFDWGKGETANMILDDGGDATMFVLWGAKLEAGVE----FPAPQNEEEEIFQ 163          
BLAST of FC931525 vs. ExPASy Swiss-Prot
Match: SAHH_PROM9 (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9312) GN=ahcY PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.465e-39
Identity = 86/155 (55.48%), Postives = 103/155 (66.45%), Query Frame = 1
Query:  127 MALSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEE 591
            M ++    +S   + V D+S +DFGR EI++AE EMPGLMA R ++   +P KGAKI GSLHMTIQTAVLIETL  LGAEV+W SCNIFSTQDH               KGETL EYW  T   LDWG    P++I+DDGGDAT L+  G KAE+
Sbjct:    1 MVIANSVKSSTTNYVVADISLSDFGRKEIKIAETEMPGLMALRDKYQSEKPLKGAKIAGSLHMTIQTAVLIETLVDLGAEVKWASCNIFSTQDHAAAAIADQGISVYAKKGETLDEYWQYTHCILDWG-ADSPNMILDDGGDATGLLILGSKAEK 154          
The following BLAST results are available for this feature:
BLAST of FC931525 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
SAHH_CORDI2.260e-4047.85Adenosylhomocysteinase OS=Corynebacterium diphther... [more]
SAHH_RHOSH2.952e-4059.86Adenosylhomocysteinase OS=Rhodobacter sphaeroides ... [more]
SAHH_CHRVO2.952e-4050.28Adenosylhomocysteinase OS=Chromobacterium violaceu... [more]
SAHH_PROMA5.035e-4053.90Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_CANAL5.035e-4055.21Adenosylhomocysteinase OS=Candida albicans GN=SAH1... [more]
SAHH_NITEU6.575e-4051.11Adenosylhomocysteinase OS=Nitrosomonas europaea GN... [more]
SAHH_BURPP6.575e-4053.55Adenosylhomocysteinase OS=Burkholderia phytofirman... [more]
SAHH_BURXL8.588e-4048.68Adenosylhomocysteinase OS=Burkholderia xenovorans ... [more]
SAHH_ZYMMO1.122e-3953.13Adenosylhomocysteinase OS=Zymomonas mobilis GN=ahc... [more]
SAHH_PROM91.465e-3955.48Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]

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Properties
Property NameValue
Genbank descriptionC34106A09EF PostHarvP1 Citrus clementina cDNA clone C34106A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931525 ID=FC931525; Name=FC931525; organism=Citrus clementina; type=EST; length=698bp
GGCTCACACCCACTCTATCTCTCTCGCTTGTACAATCATTCACTTTGTTT
GGTTGGTTTCCAAAGAGAGAGTAGAGTGCCCTCTCTTCCTTCTTCCTTTT
AGATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGTCCAGAAATCC
GCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGACTTCGG
CCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTT
GCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGCCAAGATCACC
GGTTCACTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCTCAC
CGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCAACCC
AAGACCACGCGGCCGCCGCCATCGCACGTGACTCCGCCTCCGTCTTTGCC
TGGAAGGGTGAGACCCTCCAGGAGTACTGGTGGTGCACGGAGAAAGCCCT
GGACTGGGGTCCCGGCGGCGGCCCAGATCTCATCGTCGATGACGGTGGTG
ACGCCACGTTGTTGATCCACGAGGGAGTCAAAGCTGAGGAGATCTACGAG
AAGACCGGGAAGTTGCCCGACCCGGCCTCCACCGACAACGCCGAGTTTCA
GATTGTTTTGACTATCATTAGAGATGGGTTGAAGGCCGATCCCAGAAG
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