FC931529
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931529 vs. ExPASy Swiss-Prot
Match: DCEA_ECO57 (Glutamate decarboxylase alpha OS=Escherichia coli O157:H7 GN=gadA PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 3.878e-48 Identity = 99/224 (44.20%), Postives = 135/224 (60.27%), Query Frame = 1 Query: 28 TDSR-EILSSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTK 696 TD R E+L S F ++ + + P + M + A+Q+INDEL LDGN R NLA+F TW + KL+ SINKN++D +EYP + + RCVNM+A L++ P + AVG T+GSSEA ML G+A K +W+++ + GKP DKPN+V G VQ+CW KFARY+ G M+P + +E DENTI V G T TG +E + LHD L K Sbjct: 7 TDFRSELLDSRFGAKAISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDK 229
BLAST of FC931529 vs. ExPASy Swiss-Prot
Match: DCEB_ECOL6 (Glutamate decarboxylase beta OS=Escherichia coli O6 GN=gadB PE=2 SV=2) HSP 1 Score: 189.504 bits (480), Expect = 1.474e-47 Identity = 98/224 (43.75%), Postives = 135/224 (60.27%), Query Frame = 1 Query: 28 TDSR-EILSSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTK 696 TD R E+L S F ++ + + P + M + A+Q+INDEL LDGN R NLA+F TW + KL+ SINKN++D +EYP + + RCVNM+A L++ P + AVG T+GSSEA ML G+A K +W+++ + GKP +KPN+V G VQ+CW KFARY+ G M+P + +E DENTI V G T TG +E + LHD L K Sbjct: 7 TDLRSELLDSRFGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDDNVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTNKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDK 229
BLAST of FC931529 vs. ExPASy Swiss-Prot
Match: GADA_DICDI (Glutamate decarboxylase A OS=Dictyostelium discoideum GN=gadA PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 8.941e-45 Identity = 95/230 (41.30%), Postives = 139/230 (60.43%), Query Frame = 1 Query: 7 MVISTTETDSREILSSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTK 696 M + +T+ + ++AS I ++ + + S E +I DEL+LDGN + NLA+F T ++ E L+ I+KN +D DEYP T E+++RCV+++A L+N+P + +G T GSSEA ML G+A K +W++ RK+QGKP+DKPNIVTG VQ+CW KFA YF Y+M P +A++ DENTI V LG T T ++EDVK + + L K Sbjct: 1 MSLHHVKTNKYKGFYDSYASPPATKEISKYSLKEESNKPEVIRDLIIDELLLDGNAKQNLATFCQTDLDKEIHVLMDKCIDKNMIDKDEYPQTAEIESRCVHILADLWNSP--ESSETIGCSTTGSSEAAMLGGMALKWRWRENRKKQGKPFDKPNIVTGP-VQICWHKFALYFDIELREVPMEHDRYIMTPEEAIKRCDENTIGVIPTLGVTFTLQYEDVKGISEALDK 227
BLAST of FC931529 vs. ExPASy Swiss-Prot
Match: DCE_LACLM (Glutamate decarboxylase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=gadB PE=1 SV=2) HSP 1 Score: 178.333 bits (451), Expect = 3.398e-44 Identity = 91/230 (39.57%), Postives = 137/230 (59.57%), Query Frame = 1 Query: 7 MVISTTETDSREILSSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYD--KPNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLL 690 M+ D E L F S + +P++K+ S+ AYQ++ DE++ +GN RLNLA+F T+MEPE KL+ ++ KN +D EYP TTE++NRCVNMIA L+N ++ + +G T+GSSEA ML G+A K W+++ ++ G + KPN+V + QVCWEKF Y+ + +N K ++ VDE TI V I+G T TG ++D+K L +L+ Sbjct: 1 MLYGKENRDEAEFLEPIFGSESEQVDLPKYKLAQQSIEPRVAYQLVQDEMLDEGNARLNLATFCQTYMEPEAVKLMSQTLEKNAIDKSEYPRTTEIENRCVNMIADLWN--ASEKEKFMGTSTIGSSEACMLGGMAMKFSWRKRAEKLGLDINAKKPNLVISSGYQVCWEKFCVYWDIEMREVPMDREHMSINLEKVMDYVDEYTIGVVGIMGITYTGRYDDIKALDNLI 228
BLAST of FC931529 vs. ExPASy Swiss-Prot
Match: DCE_LACLA (Glutamate decarboxylase OS=Lactococcus lactis subsp. lactis GN=gadB PE=1 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 4.437e-44 Identity = 91/230 (39.57%), Postives = 137/230 (59.57%), Query Frame = 1 Query: 7 MVISTTETDSREILSSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYD--KPNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLL 690 M+ D E L F S + +P++K+ S+ AYQ++ DE++ +GN RLNLA+F T+MEPE KL+ ++ KN +D EYP TTE++NRCVNMIA L+N ++ + +G T+GSSEA ML G+A K W+++ ++ G + KPN+V + QVCWEKF Y+ + +N K ++ VDE TI V I+G T TG ++D+K L +L+ Sbjct: 1 MLYGKENRDEAEFLEPIFGSESEQVDLPKYKLAQQSIEPRVAYQLVQDEMLDEGNARLNLATFCQTYMEPEAVKLMSQTLEKNAIDKSEYPRTTEIENRCVNMIADLWN--ASEKEKFMGTSTIGSSEACMLGGMAMKFSWRKRAEKLGLDINAKKPNLVISSGYQVCWEKFCIYWDIEMREVPMDKEHMSINLDKVMDYVDEYTIGVVGIMGITYTGRYDDIKALDNLI 228
BLAST of FC931529 vs. ExPASy Swiss-Prot
Match: GADB_DICDI (Glutamate decarboxylase B OS=Dictyostelium discoideum GN=gadB PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 7.569e-44 Identity = 94/222 (42.34%), Postives = 130/222 (58.56%), Query Frame = 1 Query: 31 DSREILSSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTK 696 D + L + I +FK+ D+ E ++I DEL+LDGN + NLA+F T ++ ++ I+KN +D DEYP + E++NRC++++A L+N P D +G T GSSEA ML GLA K W++ RK+ G PYDKPNIVTG VQ+CW KFA YF G YVMN + ++ VDENTI V LG T T ++EDV + + L K Sbjct: 7 DKHKSLYDNYVQSATTEEIAKFKLADDPNEPETIKKLIMDELLLDGNSKQNLATFCQTDLDKNIHSIMDKCIDKNMIDKDEYPQSAEIENRCLHILADLWNAP--DSSDTIGCSTTGSSEAAMLGGLALKWNWRENRKKLGLPYDKPNIVTGP-VQICWHKFALYFDIEIREIPMENGRYVMNSEEVLKRVDENTIGVIPTLGVTFTLQYEDVFSISNALDK 225
BLAST of FC931529 vs. ExPASy Swiss-Prot
Match: DCEC_LISMO (Probable glutamate decarboxylase gamma OS=Listeria monocytogenes GN=lmo2434 PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.336e-40 Identity = 86/211 (40.76%), Postives = 126/211 (59.72%), Query Frame = 1 Query: 58 FASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYD--KPNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHD 684 F S +IP++ + M AYQ++ D+LM +GN R NLA+F T+ME E + L+ ++ KN +D EYP T EL+NRCVN++A L+N P D + +G TVGSSEA ML GLA K +W+ +++G +PN++ + QVCWEKF Y+ + ++ K +LVDE TI V ILG T TG+F+D++LL + Sbjct: 19 FGSEEESTSIPKYVLKKEPMEPRIAYQLVKDQLMDEGNARQNLATFCQTYMEKEAEILMAETLEKNAIDKSEYPQTAELENRCVNILADLWNAP--KDMSYLGTSTVGSSEACMLGGLAMKFRWRNNAEKRGLDIQAKRPNLIISSGYQVCWEKFCVYWDVDMRVVPMDKNHLSLDVDKVFDLVDEYTIGVVGILGITYTGKFDDIQLLDE 227
BLAST of FC931529 vs. ExPASy Swiss-Prot
Match: DCEC_LISIN (Probable glutamate decarboxylase gamma OS=Listeria innocua GN=lin2528 PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 5.077e-40 Identity = 85/211 (40.28%), Postives = 125/211 (59.24%), Query Frame = 1 Query: 58 FASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYD--KPNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHD 684 F S +IP++ + M AYQ++ D+LM +GN R NLA+F T+ME E + L+ ++ KN +D EYP T EL+NRCVN++A L+N P + + +G TVGSSEA ML GLA K +W+ +++G +PN++ + QVCWEKF Y+ + ++ K ELVDE TI + ILG T TG+F+D+ LL + Sbjct: 19 FGSEEESTSIPKYVLKKEPMEPRIAYQLVKDQLMDEGNARQNLATFCQTYMEKEAEILMAETLEKNAIDKSEYPQTAELENRCVNILADLWNAP--KEMSYLGTSTVGSSEACMLGGLAMKFRWRNNAEKRGLDIQAKRPNLIISSGYQVCWEKFCVYWDVDMRVVPMDKEHLSLDVEKVFELVDEYTIGIVGILGITYTGKFDDIALLDE 227
BLAST of FC931529 vs. ExPASy Swiss-Prot
Match: DCE_YEAST (Glutamate decarboxylase OS=Saccharomyces cerevisiae GN=GAD1 PE=1 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 6.631e-40 Identity = 84/203 (41.38%), Postives = 124/203 (61.08%), Query Frame = 1 Query: 91 RFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYF-XXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTK 696 ++ +P +P + +YQ+I++EL LDGNP LNLASFV T+ + KL+ ++ KN D DEYP EL RC++M+A L++ D+ +G T GSSEAIML GLA K++W+ + K GK KPNI+ + QV EKF RYF +++++P + VDENTI ILG+T TG E+V+ + D+L++ Sbjct: 59 KYSVPKKGLPADLSYQLIHNELTLDGNPHLNLASFVNTFTTDQARKLIDENLTKNLADNDEYPQLIELTQRCISMLAQLWH--ANPDEEPIGCATTGSSEAIMLGGLAMKKRWEHRMKNAGKDASKPNIIMSSACQVALEKFTRYFEVECRLVPVSHRSHHMLDPESLWDYVDENTIGCFVILGTTYTGHLENVEKVADVLSQ 259
BLAST of FC931529 vs. ExPASy Swiss-Prot
Match: DCEB_LISIN (Glutamate decarboxylase beta OS=Listeria innocua GN=gadB PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 8.105e-38 Identity = 83/225 (36.89%), Postives = 128/225 (56.89%), Query Frame = 1 Query: 22 TETDSREILSSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPY--DKPNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLL 690 ++ + L F S IP++ + + AY+++ DEL+ +G+ R NLA+F T+ME E KL+ ++ KN +D EYP T EL+NRCVN+IA L++ P D+ +G T+GSSEA ML G+A K W+++ ++ G KPN+V + QVCWEKF Y+ + +N + ++ VDE TI V ILG T TG ++D+ L++ L Sbjct: 4 SKENKESYLEPVFGSSAEDRDIPKYTLAKEPLEPRIAYRLVKDELLDEGSARQNLATFCQTYMEDEATKLMSETLEKNAIDKSEYPRTAELENRCVNIIADLWHAP--KDQKFMGTSTIGSSEACMLGGMAMKFAWRKRAEKLGLDIYAQKPNLVISSGYQVCWEKFCVYWDIDMRVVPMDKDHMQLNTDQVLDYVDEYTIGVVGILGITYTGRYDDIYALNEKL 226 The following BLAST results are available for this feature:
BLAST of FC931529 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931529 ID=FC931529; Name=FC931529; organism=Citrus clementina; type=EST; length=699bpback to top |