FC931531

Overview
NameFC931531
Unique NameFC931531
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length637
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931531 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.065e-91
Identity = 169/201 (84.08%), Postives = 179/201 (89.05%), Query Frame = 1
Query:   34 MEGKEEDVRLGANKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDA 636
            MEGKEEDVR+GANKF ERQPIGT+AQ+   KDY EPPPAP FEPGEL SWSF+RAGIAEFIATFLFLYI+VLTVMGV +S   C++VGIQGIAWAFGGMIF LVYCTAGISGGHINPAVT GLFLARKLSLTRAL+Y+VMQCLGAICGAGVVKGF    QY  L GGAN VAHGYTKG GLGAEIIGTFVLVYTVFSATDA
Sbjct:    1 MEGKEEDVRVGANKFPERQPIGTSAQSD--KDYKEPPPAPFFEPGELSSWSFWRAGIAEFIATFLFLYITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQ-PKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDA 198          
BLAST of FC931531 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.065e-91
Identity = 169/201 (84.08%), Postives = 179/201 (89.05%), Query Frame = 1
Query:   34 MEGKEEDVRLGANKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDA 636
            MEGKEEDVR+GANKF ERQPIGT+AQ+   KDY EPPPAP FEPGEL SWSF+RAGIAEFIATFLFLYI+VLTVMGV +S   C++VGIQGIAWAFGGMIF LVYCTAGISGGHINPAVT GLFLARKLSLTRAL+Y+VMQCLGAICGAGVVKGF    QY  L GGAN VAHGYTKG GLGAEIIGTFVLVYTVFSATDA
Sbjct:    1 MEGKEEDVRVGANKFPERQPIGTSAQSD--KDYKEPPPAPFFEPGELSSWSFWRAGIAEFIATFLFLYITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQ-PKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDA 198          
BLAST of FC931531 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 1.392e-91
Identity = 168/201 (83.58%), Postives = 180/201 (89.55%), Query Frame = 1
Query:   34 MEGKEEDVRLGANKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDA 636
            MEGKEEDVR+GANKF ERQPIGT+AQ+   KDY EPPPAPLFEPGEL SWSF+RAGIAEFIATFLFLYI+VLTVMGV +S   C++VGIQGIAWAFGGMIF LVYCTAGISGGHINPAVT GLFLARKLSLTRA++Y+VMQCLGAICGAGVVKGF    QY  L GGAN +AHGYTKG GLGAEIIGTFVLVYTVFSATDA
Sbjct:    1 MEGKEEDVRVGANKFPERQPIGTSAQSD--KDYKEPPPAPLFEPGELASWSFWRAGIAEFIATFLFLYITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVYYIVMQCLGAICGAGVVKGFQ-PKQYQALGGGANTIAHGYTKGSGLGAEIIGTFVLVYTVFSATDA 198          
BLAST of FC931531 vs. ExPASy Swiss-Prot
Match: PIP13_ORYSJ (Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica GN=PIP1-3 PE=2 SV=2)

HSP 1 Score: 328.946 bits (842), Expect = 1.302e-89
Identity = 165/201 (82.09%), Postives = 176/201 (87.56%), Query Frame = 1
Query:   34 MEGKEEDVRLGANKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDA 636
            MEGKEEDVRLGAN++ ERQPIGTAAQ  + KDY EPP AP+FE  EL SWSFYRAGIAEF+ATFLFLYIS+LTVMGV KS +KC+TVGIQGIAW+FGGMIF LVYCTAGISGGHINPAVT GLFLARKLSLTRA+FYM MQCLGAICGAGVVKGF   G Y    GGAN V  GYTKGDGLGAEI+GTFVLVYTVFSATDA
Sbjct:    1 MEGKEEDVRLGANRYTERQPIGTAAQGAEEKDYREPPAAPVFEVEELTSWSFYRAGIAEFVATFLFLYISILTVMGVNKSASKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMAMQCLGAICGAGVVKGFQ-RGLYMGSGGGANAVNPGYTKGDGLGAEIVGTFVLVYTVFSATDA 200          
BLAST of FC931531 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 327.791 bits (839), Expect = 2.902e-89
Identity = 165/201 (82.09%), Postives = 176/201 (87.56%), Query Frame = 1
Query:   34 MEGKEEDVRLGANKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDA 636
            MEGKEEDVRLGANKF+ER  IGTAAQ  D KDY EPPPAPLFEPGELKSWSFYR GIAEF+ATFLFLYIS+LTVMGV KS +KC+TVGIQGIAW+FGGMI  LVYCTAGIS GHINPAVT GLFLARKLSLTRA+FY++MQCLGAICG GVVKGF   G Y    G  NVVA GYTKGDGLGAEI+GTF+LVYTVFSATDA
Sbjct:    1 MEGKEEDVRLGANKFSERHAIGTAAQGTDDKDYKEPPPAPLFEPGELKSWSFYRPGIAEFVATFLFLYISILTVMGVSKSTSKCATVGIQGIAWSFGGMILALVYCTAGIS-GHINPAVTFGLFLARKLSLTRAVFYIIMQCLGAICGRGVVKGFQ-QGLYMGNGGRRNVVAPGYTKGDGLGAEIVGTFILVYTVFSATDA 199          
BLAST of FC931531 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 9.659e-85
Identity = 154/205 (75.12%), Postives = 173/205 (84.39%), Query Frame = 1
Query:   22 GVAEMEGKEEDVRLGANKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDA 636
            G  +   +EEDVR+G ++F ERQPIGTAA    G+DY EPP APLFE  EL SWSFYRAGIAEF+ATFLFLY++VLTVMGV KS +KC TVGIQGIAWAFGGMIF LVYCTAG+SGGHINPAVT GL LARKLSLTRA++Y+VMQCLGA+CGAGVVK F G+  Y    GGAN V+ GYTKGDGLGAE++GTFVLVYTVFSATDA
Sbjct:    4 GTLQDRSEEEDVRVGVDRFPERQPIGTAADDL-GRDYSEPPAAPLFEASELSSWSFYRAGIAEFVATFLFLYVTVLTVMGVSKSPSKCGTVGIQGIAWAFGGMIFALVYCTAGVSGGHINPAVTFGLLLARKLSLTRAVYYVVMQCLGAVCGAGVVKAF-GSALYESAGGGANAVSPGYTKGDGLGAEVVGTFVLVYTVFSATDA 206          
BLAST of FC931531 vs. ExPASy Swiss-Prot
Match: PIP27_ARATH (Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7 PE=1 SV=2)

HSP 1 Score: 261.151 bits (666), Expect = 3.335e-69
Identity = 131/180 (72.78%), Postives = 142/180 (78.89%), Query Frame = 1
Query:   94 IGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATD 633
            +    +T  GKDYV+PPPAPL + GELKSWSFYRA IAEFIAT LFLY++V TV+G  K    C  VG+ GIAWAFGGMIFVLVYCTAGISGGHINPAVT GLFLARK+SL RAL YM+ QCLGAICG G VK FM    Y  L GGAN VA GY+KG  LGAEIIGTFVLVYTVFSATD
Sbjct:    5 VSEEGKTHHGKDYVDPPPAPLLDMGELKSWSFYRALIAEFIATLLFLYVTVATVIGHKKQTGPCDGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALGYMIAQCLGAICGVGFVKAFMKT-PYNTLGGGANTVADGYSKGTALGAEIIGTFVLVYTVFSATD 183          
BLAST of FC931531 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 4.816e-68
Identity = 126/173 (72.83%), Postives = 140/173 (80.92%), Query Frame = 1
Query:  115 QDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATD 633
            Q GKDYV+PPPAP F+ GELK WSF+RA IAEFIAT LFLYI+V TV+G  K    C++VG+ GIAW+FGGMIFVLVYCTAGISGGHINPAVT GLFLARK+SL RAL YM+ QC GAICG G+VK FM  G Y +  GGAN VA GY KG   GAE+IGTFVLVYTVFSATD
Sbjct:   14 QHGKDYVDPPPAPFFDMGELKLWSFWRAAIAEFIATLLFLYITVATVIGYKKETDPCASVGLLGIAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLLRALVYMIAQCAGAICGVGLVKAFM-KGPYNQFGGGANSVALGYNKGTAFGAELIGTFVLVYTVFSATD 185          
BLAST of FC931531 vs. ExPASy Swiss-Prot
Match: PIP28_ARATH (Probable aquaporin PIP2-8 OS=Arabidopsis thaliana GN=PIP2-8 PE=1 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 3.451e-66
Identity = 127/171 (74.27%), Postives = 137/171 (80.12%), Query Frame = 1
Query:  121 GKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATD 633
            GKDYV+PPPAPL +  ELK WSFYRA IAEFIAT LFLY++V TV+G       C  VG+ GIAWAFGGMIFVLVYCTAGISGGHINPAVT GLFLARK+SL RA+ YMV QCLGAICG G+VK FM    Y RL GGAN VA GY+ G  LGAEIIGTFVLVYTVFSATD
Sbjct:   12 GKDYVDPPPAPLLDMAELKLWSFYRAIIAEFIATLLFLYVTVATVIGHKNQTGPCGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLPRAVAYMVAQCLGAICGVGLVKAFM-MTPYKRLGGGANTVADGYSTGTALGAEIIGTFVLVYTVFSATD 181          
BLAST of FC931531 vs. ExPASy Swiss-Prot
Match: PIP27_MAIZE (Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 4.984e-65
Identity = 123/177 (69.49%), Postives = 135/177 (76.27%), Query Frame = 1
Query:  124 KDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGV-------VKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATD 633
            KDY +PPPAPL +P EL  WS YRA IAEFIAT LFLYI+VLT++G        +  NT+C  VGI GIAWAFGGMIF+LVYCTAGISGGHINPAVT GLFL RK+SL RAL YM+ QC GAICGAG+ KGF     Y R  GG N V+ GY KG  LGAEIIGTFVLVYTVFSATD
Sbjct:   17 KDYHDPPPAPLIDPDELTKWSLYRAAIAEFIATLLFLYITVLTIIGYKRQSDTKIPGNTECDGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLVRALLYMIAQCAGAICGAGLAKGFQ-KSFYNRYGGGVNTVSDGYNKGTALGAEIIGTFVLVYTVFSATD 192          
The following BLAST results are available for this feature:
BLAST of FC931531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
PIP11_VICFA1.065e-9184.08Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1[more]
PIP11_ARATH1.065e-9184.08Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1... [more]
PIP12_ARATH1.392e-9183.58Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2... [more]
PIP13_ORYSJ1.302e-8982.09Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica ... [more]
PIP11_MAIZE2.902e-8982.09Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1[more]
PIP16_MAIZE9.659e-8575.12Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1[more]
PIP27_ARATH3.335e-6972.78Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7... [more]
PIP1_ATRCA4.816e-6872.83Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1[more]
PIP28_ARATH3.451e-6674.27Probable aquaporin PIP2-8 OS=Arabidopsis thaliana ... [more]
PIP27_MAIZE4.984e-6569.49Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC34106B04EF PostHarvP1 Citrus clementina cDNA clone C34106B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931531 ID=FC931531; Name=FC931531; organism=Citrus clementina; type=EST; length=637bp
TGACTATTTTGTGTTTTTGAGGGAGTAGCAGAAATGGAGGGCAAAGAAGA
GGATGTTAGACTGGGAGCCAACAAGTTCGCCGAGAGGCAGCCGATTGGGA
CGGCGGCTCAGACCCAAGATGGCAAGGACTACGTTGAACCCCCACCGGCG
CCGCTCTTCGAGCCCGGCGAGCTCAAGTCTTGGTCGTTTTACAGGGCCGG
TATAGCCGAGTTCATAGCCACTTTTCTTTTCTTGTACATCTCCGTACTGA
CAGTGATGGGCGTCGTCAAGTCCAACACCAAGTGCTCAACCGTCGGCATT
CAAGGGATTGCATGGGCCTTCGGTGGCATGATCTTCGTGCTCGTTTACTG
CACAGCTGGCATCTCGGGTGGTCATATCAACCCGGCGGTGACACTCGGCC
TGTTCTTGGCGAGGAAGCTGTCGCTGACACGTGCACTTTTCTACATGGTG
ATGCAGTGTCTGGGAGCCATCTGCGGTGCTGGCGTTGTTAAGGGTTTCAT
GGGTGCCGGCCAATACGGGCGGCTCGCCGGCGGTGCCAACGTCGTAGCTC
ATGGCTACACCAAGGGTGATGGTCTTGGTGCCGAGATTATTGGTACTTTT
GTTCTTGTCTACACAGTTTTCTCTGCCACTGATGCCA
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