FC931531

Overview
NameFC931531
Unique NameFC931531
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length637
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931531 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.739e-20
Identity = 59/151 (39.07%), Postives = 87/151 (57.62%), Query Frame = 1
Query:  184 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDA 636
            +F++A  AEF+A  +F+ +SV + +    S      V +  I+  FG  I  +V C   ISGGHINPAVT+ +   RK+S+ +++FY+  QCLGAI GAG++         G L  G   V    T G GL  E+I TF LV+T+F++ D+
Sbjct:   33 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLP-VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGL--GVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDS 180          
BLAST of FC931531 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.739e-20
Identity = 59/151 (39.07%), Postives = 87/151 (57.62%), Query Frame = 1
Query:  184 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDA 636
            +F++A  AEF+A  +F+ +SV + +    S      V +  I+  FG  I  +V C   ISGGHINPAVT+ +   RK+S+ +++FY+  QCLGAI GAG++         G L  G   V    T G GL  E+I TF LV+T+F++ D+
Sbjct:   36 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLP-VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPNVVGGL--GVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDS 183          
BLAST of FC931531 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.883e-20
Identity = 59/156 (37.82%), Postives = 87/156 (55.77%), Query Frame = 1
Query:  169 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDA 636
            E+ S +F +A  AEF+AT +F++  + + +         +   I  IA AFG  I  L      +SGGHINPA+TL L +  ++SL RA+FY+V Q +GAI GAG++ G       G LA   N + +  T G  +  E+I TF L   +FS+TD+
Sbjct:    4 EVCSLAFLKAVFAEFLATLIFVFFGLASAL-----KWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAVFYVVAQLVGAIAGAGILYGLAPGNARGNLA--VNSLNNNTTPGQAVVVEMILTFQLALCIFSSTDS 152          
BLAST of FC931531 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 6.378e-20
Identity = 58/151 (38.41%), Postives = 88/151 (58.28%), Query Frame = 1
Query:  184 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDA 636
            +F++A  AEF+A  +F+ +S+ + +       K   V +  I+  FG  I  +V C   ISGGHINPAVT+ +   RK+S+ +++FY+  QCLGAI GAG++         G L  G  +V    T G GL  E+I TF LV+T+F++ D+
Sbjct:   33 AFWKAVTAEFLAMLIFVLLSLGSTINW-GGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGL--GVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDS 180          
BLAST of FC931531 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.088e-19
Identity = 60/152 (39.47%), Postives = 88/152 (57.89%), Query Frame = 1
Query:  184 SFYRAGIAEFIATFLFLYISV-LTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDA 636
            +F++A  AEF+A  +F+ +S+  T+    K N     V +  I+  FG  I  +V C   ISGGHINPAVT+ +   RK+S+ +++FY+  QCLGAI GAG++         G L  G   V    T G GL  E+I TF LV+T+F++ D+
Sbjct:   33 AFWKAVTAEFLAMLIFVLLSLGSTINWGGKENPL--PVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGL--GVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDS 180          
BLAST of FC931531 vs. ExPASy Swiss-Prot
Match: AQP5_HUMAN (Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.134e-19
Identity = 57/156 (36.54%), Postives = 86/156 (55.13%), Query Frame = 1
Query:  169 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDA 636
            E+ S +F +A  AEF+AT +F++  + + +         +   I  IA AFG  I  L      +SGGHINPA+TL L +  ++SL RA FY+  Q +GAI GAG++ G       G LA   N + +  T+G  +  E+I TF L   +F++TD+
Sbjct:    4 EVCSVAFLKAVFAEFLATLIFVFFGLGSAL-----KWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLA--VNALNNNTTQGQAMVVELILTFQLALCIFASTDS 152          
BLAST of FC931531 vs. ExPASy Swiss-Prot
Match: AQP5_MOUSE (Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.399e-19
Identity = 56/156 (35.90%), Postives = 87/156 (55.77%), Query Frame = 1
Query:  169 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDA 636
            E+ S +F++A  AEF+AT +F++  + + +         +   I  I+ AFG  I  L      +SGGHINPA+TL L +  ++SL RA+FY+  Q +GAI GAG++         G LA   N +++  T G  +  E+I TF L   +FS+TD+
Sbjct:    4 EVCSVAFFKAVFAEFLATLIFVFFGLGSAL-----KWPSALPTILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAIFYVAAQLVGAIAGAGILYWLAPGNARGNLA--VNALSNNTTPGKAVVVELILTFQLALCIFSSTDS 152          
BLAST of FC931531 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3)

HSP 1 Score: 93.9745 bits (232), Expect = 7.052e-19
Identity = 56/151 (37.09%), Postives = 88/151 (58.28%), Query Frame = 1
Query:  184 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDA 636
            +F++A  AEF+A  +F+ +S+ + +    +  K   V +  I+  FG  I  +V C   ISGGHINPAVT+ +   R++S+ +++FY+  QCLGAI GAG++         G L  G   V    + G GL  E+I TF LV+T+F++ D+
Sbjct:   33 TFWKAVTAEFLAMLIFVLLSLGSTINWGGAE-KPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRRISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGL--GVTTVHGNLSAGHGLLVELIITFQLVFTIFASCDS 180          
BLAST of FC931531 vs. ExPASy Swiss-Prot
Match: AQP5_RAT (Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.203e-18
Identity = 56/156 (35.90%), Postives = 86/156 (55.13%), Query Frame = 1
Query:  169 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDA 636
            E+ S +F++A  AEF+AT +F++  + + +         +   I  I+ AFG  I  L      +SGGHINPA+TL L +  ++SL RA+FY+  Q +GAI GAG++         G LA   N + +  T G  +  E+I TF L   +FS+TD+
Sbjct:    4 EVCSLAFFKAVFAEFLATLIFVFFGLGSAL-----KWPSALPTILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAVFYVAAQLVGAIAGAGILYWLAPLNARGNLA--VNALNNNTTPGKAMVVELILTFQLALCIFSSTDS 152          
BLAST of FC931531 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.571e-18
Identity = 55/156 (35.26%), Postives = 86/156 (55.13%), Query Frame = 1
Query:  169 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDA 636
            E+ S +F +A  AEF+AT +F++  + + +         +   +  I+ AFG  I  +      +SGGH+NPA+TL L +  ++SL RA+FY+V Q +GAI GA ++ G         LA   N + +  T G  + AE+I TF L   VFS+TD+
Sbjct:    4 EVCSAAFLKAVFAEFLATLIFVFFGLGSAL-----KWPSAMPSVLQISLAFGLAIGTMAQALGPVSGGHMNPAITLALLVGNQISLLRAVFYLVAQLVGAIAGAAILYGLAPYNARSNLA--VNALNNNTTAGQAVVAEMILTFQLALCVFSSTDS 152          
The following BLAST results are available for this feature:
BLAST of FC931531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
AQP4_RAT3.739e-2039.07Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1[more]
AQP4_NOTAL3.739e-2039.07Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1[more]
AQP5_PIG4.883e-2037.82Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1[more]
AQP4_HUMAN6.378e-2038.41Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2[more]
AQP4_DIPME1.088e-1939.47Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=... [more]
AQP5_HUMAN4.134e-1936.54Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1[more]
AQP5_MOUSE5.399e-1935.90Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1[more]
AQP4_BOVIN7.052e-1937.09Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3[more]
AQP5_RAT1.203e-1835.90Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1[more]
AQP5_SHEEP4.571e-1835.26Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC34106B04EF PostHarvP1 Citrus clementina cDNA clone C34106B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931531 ID=FC931531; Name=FC931531; organism=Citrus clementina; type=EST; length=637bp
TGACTATTTTGTGTTTTTGAGGGAGTAGCAGAAATGGAGGGCAAAGAAGA
GGATGTTAGACTGGGAGCCAACAAGTTCGCCGAGAGGCAGCCGATTGGGA
CGGCGGCTCAGACCCAAGATGGCAAGGACTACGTTGAACCCCCACCGGCG
CCGCTCTTCGAGCCCGGCGAGCTCAAGTCTTGGTCGTTTTACAGGGCCGG
TATAGCCGAGTTCATAGCCACTTTTCTTTTCTTGTACATCTCCGTACTGA
CAGTGATGGGCGTCGTCAAGTCCAACACCAAGTGCTCAACCGTCGGCATT
CAAGGGATTGCATGGGCCTTCGGTGGCATGATCTTCGTGCTCGTTTACTG
CACAGCTGGCATCTCGGGTGGTCATATCAACCCGGCGGTGACACTCGGCC
TGTTCTTGGCGAGGAAGCTGTCGCTGACACGTGCACTTTTCTACATGGTG
ATGCAGTGTCTGGGAGCCATCTGCGGTGCTGGCGTTGTTAAGGGTTTCAT
GGGTGCCGGCCAATACGGGCGGCTCGCCGGCGGTGCCAACGTCGTAGCTC
ATGGCTACACCAAGGGTGATGGTCTTGGTGCCGAGATTATTGGTACTTTT
GTTCTTGTCTACACAGTTTTCTCTGCCACTGATGCCA
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