FC931534
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931534 vs. ExPASy Swiss-Prot
Match: ARP10_BOVIN (Actin-related protein 10 OS=Bos taurus GN=ACTR10 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.998e-13 Identity = 71/260 (27.31%), Postives = 117/260 (45.00%), Query Frame = 2 Query: 2 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAERE------------IVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELP----------DGQII--TIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVA--------PPERKYSV-WIGGSILASL-STFQQMWISKGEYDESG 679 +L G + +VLD G S +PIYEG + + L L G+ L L L E+ + T A+ + I+ D+K + +V+ D ++ L + +++ N E P DG+ I +G+ R E+LF+ E + +S+M+C +D RK L N+V+ GG++M PG R+ EI L K +A PP + V W+GG+I +L +SK Y+++G Sbjct: 127 ALLTLGINSAMVLDCGYRESLVLPIYEGIPVLNCWGALPLGGKALHKELETQLLEQCTVDTGAAKEQSLPSVMGSIPEGILEDIKVRTCFVS-DLKRGLNIQAAKFNIDGNTERPSPPPNVDYPLDGEKILHVLGSIRDSVVEILFEQD---NEEKSVATLILDSLMQCPIDTRKQLAENLVVIGGTSMLPGFLHRLLAEIRYLVEKPKYKKTLATKTFRIHTPPAKANCVAWLGGAIFGALQDILGSRSVSKDYYNQTG 382
BLAST of FC931534 vs. ExPASy Swiss-Prot
Match: ARP10_HUMAN (Actin-related protein 10 OS=Homo sapiens GN=ACTR10 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.114e-13 Identity = 68/260 (26.15%), Postives = 120/260 (46.15%), Query Frame = 2 Query: 2 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAERE------------IVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELP----------DGQIIT--IGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITAL--------APSSMKIKVVAPPERKYSV-WIGGSILASL-STFQQMWISKGEYDESG 679 +L G + +VLD G S +PIYEG + + L L G+ L L L E+ + T+ A+ + ++ D+K + +V+ D ++ L+ + +++ N E P DG+ I +G+ R E+LF+ E + +S+++C +D RK L N+V+ GG++M PG R+ EI L A + ++ PP + V W+GG+I +L +SK Y+++G Sbjct: 127 ALLTLGINSAMVLDCGYRESLVLPIYEGIPVLNCWGALPLGGKALHKELETQLLEQCTVDTSVAKEQSLPSVMGSVPEGVLEDIKARTCFVS-DLKRGLKIQAAKFNIDGNNERPSPPPNVDYPLDGEKILHILGSIRDSVVEILFEQD---NEEQSVATLILDSLIQCPIDTRKQLAENLVVIGGTSMLPGFLHRLLAEIRYLVEKPKYKKALGTKTFRIHTPPAKANCVAWLGGAIFGALQDILGSRSVSKEYYNQTG 382
BLAST of FC931534 vs. ExPASy Swiss-Prot
Match: ARP10_MOUSE (Actin-related protein 10 OS=Mus musculus GN=Actr10 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.723e-13 Identity = 67/260 (25.77%), Postives = 118/260 (45.38%), Query Frame = 2 Query: 2 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAERE------------IVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELP----------DGQII--TIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAP--------SSMKIKVVAPPERKYSV-WIGGSILASL-STFQQMWISKGEYDESG 679 +L G + +VLD G S +PIYEG + + L L G+ L L L E+ + T A+ + ++ D+K + +V+ D ++ L+ + +++ N E P DG+ I +G+ R E+LF+ E + +S+++C +D RK L N+V+ GG++M PG R+ EI L + ++ PP + V W+GG++ +L ISK Y+++G Sbjct: 127 ALLTLGINSAMVLDCGYRESLVLPIYEGIPILNCWGALPLGGKALHKELETQLLEQCTVDTGAAKGQSLPSVMGSVPEGVLEDIKVRTCFVS-DLKRGLQIQAAKFNIDGNNERPTPPPNVDYPLDGEKILHVLGSIRDSVVEILFEQD---NEEKSVATLILDSLLQCPIDTRKQLAENLVIIGGTSMLPGFLHRLLAEIRYLVEKPKYKKTLGTKNFRIHTPPAKANCVAWLGGAVFGALQDILGSRSISKEYYNQTG 382
BLAST of FC931534 vs. ExPASy Swiss-Prot
Match: ARP5_DROPS (Actin-related protein 5 OS=Drosophila pseudoobscura pseudoobscura GN=Arp5 PE=3 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.139e-12 Identity = 42/163 (25.77%), Postives = 79/163 (48.47%), Query Frame = 2 Query: 191 AEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESG 679 A+ E + + ++ L++ ++++ A + S +NY+L G E R PE+LFQPS+IG AG+ E + ++ + ++ L+GG F G+ +R+++E + P K + + S W+G + AS F Q ++ +Y E G Sbjct: 478 ADNEQLLEFEKILSHYDVNFDDG--NAVQTQSAAENYQLH------FGVEDIRVPEILFQPSMIGSPEAGLAELIAFVLKLFTAQEQQRMVEHVYLTGGCAQFRGLKERLAREFLEMRPFQSKFSIYESDDHTLSAWLGACVQASQPNFGQTLTTRKDYQEHG 632
BLAST of FC931534 vs. ExPASy Swiss-Prot
Match: ARP5_SCHPO (Actin-like protein arp5 OS=Schizosaccharomyces pombe GN=arp5 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.538e-12 Identity = 45/180 (25.00%), Postives = 84/180 (46.67%), Query Frame = 2 Query: 143 ALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGP 682 +L K L E FT + + D + L Y + + + V + ++L + E+ R PEV+F PS++G++ AGI E + + + ++ ++ L N++++GG PG+ R+ +E+T++ P I V W G S + F+ +++ EY E GP Sbjct: 539 SLEKQLLEYDSQFTQANTYDTLNDPRATLLYAFTRGVSDFDV----NDVAQAFQLH------LNVEQIRVPEVIFSPSIVGIDQAGILEIMRSILQRHSLEEQQKLVSNVLITGGLGSLPGMETRIKRELTSIMPVGSSINVFRASNPLLDAWKGASEWSVTEKFKAAKVTREEYLEKGP 708
BLAST of FC931534 vs. ExPASy Swiss-Prot
Match: ARP6_DEBHA (Actin-like protein ARP6 OS=Debaryomyces hansenii GN=ARP6 PE=3 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 3.315e-12 Identity = 63/247 (25.51%), Postives = 100/247 (40.49%), Query Frame = 2 Query: 32 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAK-------------SSSSVEKNYELP-----DGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNS------------IMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPER-KYSVWIGGSILASLSTFQQMWISKGEYDESG 679 +V+DSG + VPI + +L + G L L +I++ R Y E ++ +KEK ++A D+E+ L K +++ K + P D Q + + ERF PE + P +I T N+ IM C + L GNI+ GG+T PG DR+ E+ P ++V + W GG+ L + + ISK +Y E G Sbjct: 152 LVVDSGYSGTWIVPIIYQNVYWKGVKKLPIGGAALNGLLREIISFRHYDIAD--EPVLINTIKEKTCFMATDFEKSLANRKKYRCEFILPDFKTTTTGFVKTKDTPIDTTGDVQSLALIDERFTIPESFYHPEIIFDNTTSSTSTIQNASFKNITDLVVECIMSCPKVTQPLLSGNIITVGGNTNLPGFTDRLRHELVKELPIDWHVQVKETEHNPDEASWFGGAQLTNDEIINNISISKKDYFEHG 396
BLAST of FC931534 vs. ExPASy Swiss-Prot
Match: ARP4_CANAL (Actin-related protein 4 OS=Candida albicans GN=ARP4 PE=3 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 3.315e-12 Identity = 37/97 (38.14%), Postives = 60/97 (61.86%), Query Frame = 2 Query: 398 GIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVA---PPERKYSVWIGGSILASLSTFQQMWISKGEYDESG 679 GI + +++ D+D+R L NI+++GG ++ + +R+ E++ P +KI++ A ER WIGGS+LASL TF QMW++K EY+E G Sbjct: 364 GISQLISHTLSNIDIDLRASLANNIIVTGGVSLISQLTERLYLELSNNNPG-LKIRLHAVGNSTERINQAWIGGSVLASLGTFHQMWVTKEEYNEVG 459
BLAST of FC931534 vs. ExPASy Swiss-Prot
Match: ACT_SPOLI (Actin (Fragment) OS=Spodoptera littoralis PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.329e-12 Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 2 Query: 2 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 100 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH Sbjct: 132 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 164
BLAST of FC931534 vs. ExPASy Swiss-Prot
Match: ARP5_DROME (Actin-related protein 5 OS=Drosophila melanogaster GN=Arp5 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.654e-12 Identity = 41/132 (31.06%), Postives = 63/132 (47.73%), Query Frame = 2 Query: 284 SVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESG 679 S +NY+L G E R PEVLFQPS+IG AG+ E + ++ L ++ L+GG F G+ +R+ KE+ + P K + E S W+G + A TF Q ++ ++ E G Sbjct: 504 SAAENYQLH------FGVENIRVPEVLFQPSMIGCSEAGLAELIAFVLKLFPAAEQQRLVEHVYLTGGCAQFKGLKERLIKELMEMRPFQSKFAIYESDEPTLSAWLGACVHAGEPTFGQTLTTRQDHQEHG 629
BLAST of FC931534 vs. ExPASy Swiss-Prot
Match: ARP5_YEAST (Actin-related protein 5 OS=Saccharomyces cerevisiae GN=ARP5 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.806e-11 Identity = 41/128 (32.03%), Postives = 66/128 (51.56%), Query Frame = 2 Query: 329 IGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMK---------CDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA-SLSTFQQMWISKGEYDESGP 682 + ER R PEV+FQP++ G + AGI E + ++K I D+ N++++GG+ PG+ +R+ KE T P+ I V + W G + LA + +++ ISK EY+E GP Sbjct: 614 LNVERIRVPEVIFQPTMGGQDQAGICELSETILLKKFGSQPGKLSQTSI--DMVNNVLITGGNAKVPGLKERIVKEFTGFLPTGTNITVNMSSDPSLDAWKGMAALARNEEQYRKTVISKKEYEEYGP 739 The following BLAST results are available for this feature:
BLAST of FC931534 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 490
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931534 ID=FC931534; Name=FC931534; organism=Citrus clementina; type=EST; length=690bpback to top |