FC931535
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: SMP1_YEAST (Transcription factor SMP1 OS=Saccharomyces cerevisiae GN=SMP1 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.395e-12 Identity = 33/67 (49.25%), Postives = 48/67 (71.64%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNSNIRSTID 301 MGR KIEI+ I++ NR VTF KR+ GL KKA+ELSVLC ++A+I+ S YEYS+ ++ + ++ Sbjct: 1 MGRRKIEIEPIKDDRNRTVTFIKRKAGLFKKAHELSVLCQVDIAVIILGSNNTFYEYSSVDMSNLLN 67
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: MCM1_YEAST (Pheromone receptor transcription factor OS=Saccharomyces cerevisiae GN=MCM1 PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.734e-11 Identity = 49/152 (32.24%), Postives = 75/152 (49.34%), Query Frame = 2 Query: 83 PKNSGPMG-RGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNSNIRSTIDRYK-----KAC----------------SDNSNSGTVTEINAQYYQQESAKLRQQI-QMLQNSNRHLMGDSLSSLTVKE 469 P N+G R KIEIK IEN T R VTF KR++G++KKA+ELSVL +V L+V S G +Y +S + + + +AC D+ + ++ Q QQ+ + +QQ+ NS HL D + + +K+ Sbjct: 9 PTNNGQQKERRKIEIKFIENKTRRHVTFSKRKHGIMKKAFELSVLTGTQVLLLVVSETGLVYTFSTPKFEPIVTQQEGRNLIQACLNAPDDEEEDEEEDGDDDDDDDDDGNDMQRQQPQQQQPQQQQQVLNAHANSLGHLNQDQVPAGALKQ 160
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: AGL61_ARATH (Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana GN=AGL61 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.734e-11 Identity = 33/74 (44.59%), Postives = 48/74 (64.86%), Query Frame = 2 Query: 86 KNSGPMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNSNIRSTIDRY 307 K +GR KI + +I+ ++RQVTF KRR GL KKA EL LC AE+ +IVFS + + + + ++ S +DRY Sbjct: 57 KKKESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSFGHPSVESVLDRY 130 The following BLAST results are available for this feature:
BLAST of FC931535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 123
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931535 ID=FC931535; Name=FC931535; organism=Citrus clementina; type=EST; length=680bpback to top |