FC931535
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSJ (MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica GN=MADS18 PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 5.844e-38 Identity = 83/177 (46.89%), Postives = 125/177 (70.62%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-SNSNIRSTIDRYKKACSDNSNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCLRIKIAEMER 628 MGRG ++++RIEN NRQVTF KRRNGLLKKA+E+SVLCDA+VALIVFS++G+LYE+ S+S++ ++RY++ D + + + E L+ ++ LQ S R L+G+ L +LT+KEL+QLE++LE + IRSKK+++L I LQK+E L+N++ L+ K+ E E+ Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQ-KLMETEK 176
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSI (MADS-box transcription factor 18 OS=Oryza sativa subsp. indica GN=MADS18 PE=2 SV=2) HSP 1 Score: 157.532 bits (397), Expect = 5.844e-38 Identity = 83/177 (46.89%), Postives = 125/177 (70.62%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-SNSNIRSTIDRYKKACSDNSNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCLRIKIAEMER 628 MGRG ++++RIEN NRQVTF KRRNGLLKKA+E+SVLCDA+VALIVFS++G+LYE+ S+S++ ++RY++ D + + + E L+ ++ LQ S R L+G+ L +LT+KEL+QLE++LE + IRSKK+++L I LQK+E L+N++ L+ K+ E E+ Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQ-KLMETEK 176
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: AGL9_ARADE (Agamous-like MADS-box protein AGL9 homolog OS=Aranda deborah PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 7.633e-38 Identity = 85/192 (44.27%), Postives = 127/192 (66.15%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-SNSNIRSTIDRYKKACSDNSNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCLRIKIAEMERFQQANMVTGQELNAI 673 MGRG++E+K IEN NRQVTF KRR LLKKAYELSVLCDAEVALI+FS+RG+LYE+ S++++ T+++Y+K C+ S T+ Q QQE KL+ +++ LQ S R+L+G+ L L KEL+QLE +L+ + +IRS + + +L ++ LQ+RE L + L+ + E + Q + +A+ Sbjct: 1 MGRGRVELKMIENKINRQVTFAKRRKRLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSTSMLKTLEKYQK-CNFGSPESTIISRETQSSQQEYLKLKNRVEALQRSQRNLLGEDLGPLGSKELEQLERQLDSSLRQIRSTRTQFMLDQLADLQRREQMLCEANKTLKRRFEESSQANQQQVWDPSNTHAV 191
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: MAD15_ORYSJ (MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica GN=MADS15 PE=1 SV=2) HSP 1 Score: 156.762 bits (395), Expect = 9.969e-38 Identity = 83/187 (44.39%), Postives = 123/187 (65.78%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-SNSNIRSTIDRYKKACSDNSNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCLRIKIAEMERFQQANMVTGQ 658 MGRGK+++KRIEN NRQVTF KRRNGLLKKA+E+SVLCDAEVA IVFS +G+LYEY ++S + ++RY++ + + + E KL+ +I+ +Q ++HLMG+ L SL +KEL+QLE +LE + I S+K ++L I LQK+E L+ E+ L+ ++ E ++ + GQ Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATDSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDLESLNLKELQQLEQQLESSLKHIISRKSHLMLESISELQKKERSLQEENKALQKELVERQKNVRGQQQVGQ 187
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSI (MADS-box transcription factor 14 OS=Oryza sativa subsp. indica GN=MADS14 PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 9.969e-38 Identity = 83/183 (45.36%), Postives = 126/183 (68.85%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNSNIRSTI----DRYKKACSDNSNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCLRIKIAEMERFQQ 637 MGRGK+++KRIENT NRQVTF KRR+GLLKKA E+SVLCDAEVALI+FS++G+LY+Y+ + I +RY A ++ + T+ N + E KL+ +++ +Q +HLMG+ L SL +KEL+QLE +LE + IRS+K +++L I LQ++E L+ E+ L+ ++ E ++ Q+ Sbjct: 1 MGRGKVQLKRIENTINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYKYATDSCMDKILERYERYSYAEKVLISAESDTQGN---WCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQKELVEKQKVQK 180
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: MTF1_PEA (MADS-box transcription factor 1 OS=Pisum sativum GN=MTF1 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.302e-37 Identity = 90/183 (49.18%), Postives = 125/183 (68.31%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-SNSNIRSTIDRYKKACSDNSNSGTVTEINAQYY----QQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCLRIKIAEMERFQ 634 MGRG++E+KR+EN NRQVTF KRRNGLLKKAYELSVLCDAEVALIVFS+RG+LYE+ S S++ T++RY+K C+ + G VT A QQE KL+ + + LQ S R+LMG+ L L+ K+L+ LE +L+ + +IRS + + +L ++ LQ++E L + LR ME +Q Sbjct: 1 MGRGRVELKRVENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCSTSSMLKTLERYQK-CNYGAPEGNVTSKEALVLELSSQQEYLKLKARYESLQRSQRNLMGEDLGPLSSKDLETLERQLDSSLKQIRSTRTQFMLDQLGDLQRKEHLLCEANRALR---QRMEGYQ 179
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSJ (MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica GN=MADS7 PE=1 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 1.700e-37 Identity = 85/195 (43.59%), Postives = 132/195 (67.69%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-SNSNIRSTIDRYKKACSDNSNSGTVTEINAQYYQQ------ESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCLRIKIAEMERFQQANMVTGQEL 664 MGRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ S ++ T+++Y+K S +G T + + +Q E KL+ +++ LQ + R+L+G+ L SL +KEL+ LE +L+ + +R+ + + L+ ++ LQ++E + + CLR K+ +++N V GQ++ Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTQSMTKTLEKYQKC----SYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKL------EESNHVRGQQV 185
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSI (MADS-box transcription factor 7 OS=Oryza sativa subsp. indica GN=MADS7 PE=2 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 1.700e-37 Identity = 85/195 (43.59%), Postives = 132/195 (67.69%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-SNSNIRSTIDRYKKACSDNSNSGTVTEINAQYYQQ------ESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCLRIKIAEMERFQQANMVTGQEL 664 MGRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ S ++ T+++Y+K S +G T + + +Q E KL+ +++ LQ + R+L+G+ L SL +KEL+ LE +L+ + +R+ + + L+ ++ LQ++E + + CLR K+ +++N V GQ++ Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTQSMTKTLEKYQKC----SYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKL------EESNHVRGQQV 185
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: MAD25_ORYSJ (MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica GN=MADS25 PE=2 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 1.700e-37 Identity = 85/192 (44.27%), Postives = 132/192 (68.75%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNSNIRSTIDRYKKACSDNSNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKRE--IELENESVCLRIKIAEMERFQQANMVTGQELNA 670 MGRGKI IKRI+NT NRQVTF KRR GL+KKA EL++LCDA+V LIVFS GRLY++S+S+++S I+RY++A ++ A+++Q+E LRQQ+Q L ++NR L+G+ +S+ TV++L+ L+N++E + IR+KK ++L EI L ++ ++ EN + + IA Q N+ ++LN+ Sbjct: 1 MGRGKIAIKRIDNTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDFSSSSMKSIIERYQEAGEEHCRLLNPMS-EAKFWQREVTTLRQQVQNLHHNNRQLLGEEISNFTVRDLQLLQNQVEMSLHSIRNKKDQLLAEEILKLNEKGSLVQKENSELRKKFNIA-----HQRNIELHKKLNS 186
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSJ (MADS-box transcription factor 14 OS=Oryza sativa subsp. japonica GN=MADS14 PE=1 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 1.700e-37 Identity = 83/183 (45.36%), Postives = 125/183 (68.31%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNSNIRSTI----DRYKKACSDNSNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCLRIKIAEMERFQQ 637 MGRGK+++KRIEN NRQVTF KRR+GLLKKA E+SVLCDAEVALI+FS++G+LYEY+ + I +RY A ++ + T+ N + E KL+ +++ +Q +HLMG+ L SL +KEL+QLE +LE + IRS+K +++L I LQ++E L+ E+ L+ ++ E ++ Q+ Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATDSCMDKILERYERYSYAEKVLISAESDTQGN---WCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQKELVEKQKVQK 180 The following BLAST results are available for this feature:
BLAST of FC931535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 123
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931535 ID=FC931535; Name=FC931535; organism=Citrus clementina; type=EST; length=680bpback to top |