FC931535
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: MAD34_ORYSJ (MADS-box transcription factor 34 OS=Oryza sativa subsp. japonica GN=MADS34 PE=2 SV=2) HSP 1 Score: 155.606 bits (392), Expect = 2.221e-37 Identity = 80/176 (45.45%), Postives = 126/176 (71.59%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-SNSNIRSTIDRYKKACSDNSNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCLRIKIAEME 625 MGRGK+ ++RIEN +RQVTF KRRNGLLKKAYELS+LCDAEVAL++FS GRLY++ S+SN+ T++RY++ + ++ T Q QE L+ +++LQ S R+L+G+ L+ L EL+QLE+++ R + +IRS+K ++LL E+ L+++E L++ + L+ K+ E++ Sbjct: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSSSNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAPLATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDEID 176
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: SEP3_ARATH (Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana GN=SEP3 PE=1 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.900e-37 Identity = 85/180 (47.22%), Postives = 126/180 (70.00%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-SNSNIRSTIDRYKK----ACSDN--SNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCLRIKIAE 619 MGRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ S+S++ T++RY+K A N S E+++ QQE KL+++ LQ + R+L+G+ L L+ KEL+ LE +L+ + +IR+ + + +L ++ LQ +E L + LR+++A+ Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLRTLERYQKCNYGAPEPNVPSREALAVELSS---QQEYLKLKERYDALQRTQRNLLGEDLGPLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLRLAD 177
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: CAL_ARATH (Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL PE=1 SV=3) HSP 1 Score: 154.451 bits (389), Expect = 4.947e-37 Identity = 79/192 (41.15%), Postives = 131/192 (68.23%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSN-SNIRSTIDRYKK-ACSDNSNSGTVTEINAQ-YYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCLRIKIAEMERFQQANMVTGQELN 667 MGRG++E+KRIEN NRQVTF KRR GLLKKA E+SVLCDAEV+LIVFS +G+L+EYS+ S + ++RY++ + ++ + +NAQ + E ++L+ +I++L+ + RH +G+ L +++K+L+ LE +LE + IRS+K++++ + LQ++E E++ E+ L +I E E + ++LN Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSESCMEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEELEPMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKERENILRTKQTQCEQLN 192
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: MAD56_ORYSJ (MADS-box transcription factor 56 OS=Oryza sativa subsp. japonica GN=MADS56 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 6.461e-37 Identity = 83/176 (47.16%), Postives = 126/176 (71.59%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNS-NIRSTIDRYKKACSDNSNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCLRIKIAEME 625 M RG+ E+KRIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEVALIVFS RGRLYE++++ +++ TIDRYK D+ N+ T+ + + Q + ++ L ++++ L S R ++G++L +++EL+ LE +LE+ + +IR KK E+L +I L+++E L ++ LR K +E Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPSLQKTIDRYKAYTKDHVNNKTIQQ-DIQQVKDDTLGLAKKLEALDESRRKILGENLEGFSIEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLRGKHRNLE 175
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: AGL9_SINAL (Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba GN=AGL9 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 6.461e-37 Identity = 84/181 (46.41%), Postives = 126/181 (69.61%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-SNSNIRSTIDRYKKACSDN-------SNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCLRIKIAE 619 MGRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ S+S++ T++RY+K C+ S E+++ QQE KL+++ LQ + R+L+G+ L L+ KEL+ LE +L+ + +IR+ + + +L ++ LQ +E L + LR+++A+ Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMIRTLERYQK-CNYGPPEPNVPSREALAVELSS---QQEYLKLKERYDALQRTQRNLLGEDLGPLSTKELELLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLNETNKTLRLRLAD 177
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: AGL3_ARATH (Agamous-like MADS-box protein AGL3 OS=Arabidopsis thaliana GN=AGL3 PE=1 SV=2) HSP 1 Score: 154.066 bits (388), Expect = 6.461e-37 Identity = 84/180 (46.67%), Postives = 123/180 (68.33%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY--SNSNIRSTIDRYKK---ACSDNSNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCLRIKIAEME 625 MGRGK+E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAE+AL++FS+RG+LYE+ S S + T+D+Y+K A D + S + Q Q+ KL+ ++++LQ+S RHL+G+ LS + V EL+ LE +++ + +IRS K +L ++ L+ +E L + LR K+ + + Sbjct: 1 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSSPSGMARTVDKYRKHSYATMDPNQSAK----DLQDKYQDYLKLKSRVEILQHSQRHLLGEELSEMDVNELEHLERQVDASLRQIRSTKARSMLDQLSDLKTKEEMLLETNRDLRRKLEDSD 176
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: AGL21_ARATH (Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana GN=AGL21 PE=1 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 8.439e-37 Identity = 80/183 (43.72%), Postives = 129/183 (70.49%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNSNIRSTIDRYKKACSDNSN-SGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCLRIKIAEMERFQQANM 646 MGRGKI I+RI+++T+RQVTF KRR GL+KKA EL++LCDAEV LI+FSS G+LY++++S+++S IDRY K+ + +E+ +++Q+E+A LRQ++ LQ ++R +MG+ L+ L+V EL LEN++E + IR +K ++L EI+ L ++ + E++ L K+ +R Q N+ Sbjct: 1 MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASSSMKSVIDRYNKSKIEQQQLLNPASEV--KFWQREAAVLRQELHALQENHRQMMGEQLNGLSVNELNSLENQIEISLRGIRMRKEQLLTQEIQELSQKRNLIHQENLDLSRKV---QRIHQENV 178
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: SEP2_ARATH (Developmental protein SEPALLATA 2 OS=Arabidopsis thaliana GN=SEP2 PE=1 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.102e-36 Identity = 87/178 (48.88%), Postives = 123/178 (69.10%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-SNSNIRSTIDRYKKACSDNS---NSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCLRIKIAEM 622 MGRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEV+LIVFS+RG+LYE+ S SN+ T++RY+K CS S N+ E+ Y +E KL+ + + LQ R+L+G+ L L KEL+QLE +L+ + ++R K + +L ++ LQ +E L + + L +K+ +M Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCSTSNMLKTLERYQK-CSYGSIEVNNKPAKELENSY--REYLKLKGRYENLQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRCIKTQYMLDQLSDLQGKEHILLDANRALSMKLEDM 175
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: MAD56_ORYSI (MADS-box transcription factor 56 OS=Oryza sativa subsp. indica GN=MADS56 PE=2 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 1.439e-36 Identity = 83/176 (47.16%), Postives = 125/176 (71.02%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNS-NIRSTIDRYKKACSDNSNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCLRIKIAEME 625 M RG+ E+KRIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEVALIVFS RGRLYE++++ +++ TIDRYK D+ N+ T+ + + Q + ++ L ++++ L S R ++G++L +++EL+ LE +LE+ + IR KK E+L +I L+++E L ++ LR K +E Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPSLQKTIDRYKAYTKDHVNNKTIQQ-DIQQVKDDTLGLAKKLEALDESRRKILGENLEGCSIEELRGLEMKLEKSLHNIRLKKTELLERQIAKLKEKERTLLKDNENLRGKHRNLE 175
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: MAD23_ORYSJ (MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica GN=MADS23 PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.439e-36 Identity = 77/158 (48.73%), Postives = 114/158 (72.15%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNSNIRSTIDRYKKACSDNSNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREI 574 MGRGKIEIKRI+N T+RQVTF KRR+GL KKA ELS+LCDAEV L+VFSS RLY++++S+++S I+RY + D + + A+ +QQE+A LRQQ+ LQ +R L+G LS L V++L+ LE++LE + IR +K +++ +I+ L ++ + Sbjct: 1 MGRGKIEIKRIDNATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASSSMKSIIERYNETKEDPHQTMNASS-EAKLWQQEAASLRQQLHNLQEYHRQLLGQQLSGLDVEDLQNLESKLEMSLKNIRLRKDNVMMDQIQELSRKVV 157 The following BLAST results are available for this feature:
BLAST of FC931535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 123
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931535 ID=FC931535; Name=FC931535; organism=Citrus clementina; type=EST; length=680bpback to top |