FC931535
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: FLC_ARATH (MADS-box protein FLOWERING LOCUS C OS=Arabidopsis thaliana GN=FLC PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.554e-27 Identity = 68/168 (40.48%), Postives = 109/168 (64.88%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSN-SNIRSTIDRYKKACSDNSNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCL 601 MGR K+EIKRIEN ++RQVTF KRRNGL++KA +LSVLCDA VAL+V S+ G+LY +S+ N+ +DRY K +D ++ A +Q ++ ++L+ + L+G ++ ++++ L QLE LE ++ R+KK E++L +E L+++E L+ E+ L Sbjct: 1 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSGDNLVKILDRYGKQHAD--------DLKALDHQSKALNYGSHYELLELVDSKLVGSNVKNVSIDALVQLEEHLETALSVTRAKKTELMLKLVENLKEKEKMLKEENQVL 160
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: MAD55_ORYSJ (MADS-box transcription factor 55 OS=Oryza sativa subsp. japonica GN=MADS55 PE=2 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 2.303e-26 Identity = 71/196 (36.22%), Postives = 110/196 (56.12%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNSNIRSTIDRY-----------KKACSD-----------NSNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCLRIKIAEM 622 M R + EI+RIE+ RQVTF KRR GL KKA EL+VLCDA+VAL+VFSS G+L ++++SN+ ID+Y K+ D +NS + Q + + L +Q+ R + G+ L L+V+EL+Q+E LE G+ R+ K + + EI LQ++ I+L E++ LR ++ ++ Sbjct: 1 MARERREIRRIESAAARQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQFASSNMNEIIDKYTTHSKNLGKTDKQPSIDLNFFLIILLRTYTNSYAYIHLLLQLEHSKCSSLNEQLAEASLQLRQMRGEELEGLSVEELQQMEKNLEAGLQRVLCTKDQQFMQEISELQRKGIQLAEENMRLRDQMPQV 196
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: PIST_ARATH (Floral homeotic protein PISTILLATA OS=Arabidopsis thaliana GN=PI PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.008e-26 Identity = 61/151 (40.40%), Postives = 100/151 (66.23%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY--SNSNIRSTIDRYKKACSDNSNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAE 547 MGRGKIEIKRIEN NR VTF KRRNGL+KKA E++VLCDA+VALI+F+S G++ +Y + ++ + +D+Y+K + + + + E +++++ LQ RHL G+ + SL +K L +E+ +E G+ ++R + E+L+++ Sbjct: 1 MGRGKIEIKRIENANNRVVTFSKRRNGLVKKAKEITVLCDAKVALIIFASNGKMIDYCCPSMDLGAMLDQYQKL-----SGKKLWDAKHENLSNEIDRIKKENDSLQLELRHLKGEDIQSLNLKNLMAVEHAIEHGLDKVRDHQMEILISK 146
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: MADS2_PETHY (Floral homeotic protein PMADS 2 OS=Petunia hybrida GN=PMADS2 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.008e-26 Identity = 67/177 (37.85%), Postives = 111/177 (62.71%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY--SNSNIRSTIDRYKKACSDNSNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCLRIKIAEME 625 MGRGKIEIKRIEN++NRQVT+ KRRNG++KKA E++VLCDA+V+LI+F + G+++EY ++ + +D Y+K ++ + + + E +++++ +Q RHL G+ ++SL KEL LE L G++ I +K+ E+L ++K + LE E L+ + + E Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAKVSLIIFGNSGKMHEYCSPSTTLPDMLDGYQK-----TSGRRLWDAKHENLSNEIDRIKKENDNMQVKLRHLKGEDINSLNHKELMVLEEGLTNGLSSISAKQSEIL----RMVRKNDQILEEEHKQLQYALHQKE 168
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: MAD47_ORYSJ (MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica GN=MADS47 PE=1 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 5.132e-26 Identity = 65/185 (35.14%), Postives = 113/185 (61.08%), Query Frame = 2 Query: 107 RGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNSNIRSTIDRYKKACSDNSNSGTVTEINAQYYQQES------AKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCLR--IKIAEMERFQQ 637 R +I I+RI+N RQVTF KRR GL KKA ELS+LCDAEV L+VFS+ G+L++++++++ IDRY NS+S T+ + A+L++++ R + G+ L L V++L++LE LE G+ + K + +L EI+ L+++ ++L E++ L+ ++++ M R ++ Sbjct: 22 RERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFASTSMEQIIDRY------NSHSKTLQRAEPSQLDLQGEDSSTCARLKEELAETSLRLRQMRGEELHRLNVEQLQELEKSLESGLGSVLKTKSKKILDEIDGLERKRMQLIEENLRLKEQLQVSRMSRMEE 200
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: MAD16_ORYSJ (MADS-box transcription factor 16 OS=Oryza sativa subsp. japonica GN=MADS16 PE=1 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 1.950e-25 Identity = 63/165 (38.18%), Postives = 102/165 (61.82%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY--SNSNIRSTIDRYKKACSDNSNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHL-------MGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKR 568 MGRGKIEIKRIEN TNRQVT+ KRR G++KKA EL+VLCDA+VA+I+FSS G+ +E+ +++I+ DRY++A I + ++ +++ + L++ NR+L MG+ L L EL+ LE ++ + +R +K+ ++ + E +K+ Sbjct: 1 MGRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSPSTDIKGIFDRYQQA------------IGTSLWIEQYENMQRTLSHLKDINRNLRTEIRQRMGEDLDGLEFDELRGLEQNVDAALKEVRHRKYHVITTQTETYKKK 153
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: MADS1_PETHY (Floral homeotic protein PMADS 1 OS=Petunia hybrida GN=PMADS1 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.344e-25 Identity = 66/164 (40.24%), Postives = 106/164 (64.63%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNSNI--RSTIDRYKKACS-DNSNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELE 583 M RGKI+IKRIEN TNRQVT+ KRRNGL KKA EL+VLCDA+V++I+ SS G+L+E+ + +I + D Y+K D NS + + Q++ KL++ + L+ R MG+SL+ L ++L++L ++ + IR +K++++ +IE +K+ +E Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMISSTGKLHEFISPSITTKQLFDLYQKTVGVDLWNS------HYEKMQEQLRKLKEVNRNLRKEIRQRMGESLNDLNYEQLEELMENVDNSLKLIRERKYKVIGNQIETFKKKVRNVE 158
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: AP3_ARATH (Floral homeotic protein APETALA 3 OS=Arabidopsis thaliana GN=AP3 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.674e-25 Identity = 65/163 (39.88%), Postives = 102/163 (62.58%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY--SNSNIRSTIDRYKKACSDNSNSGTVTEIN---AQY--YQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKR 568 M RGKI+IKRIEN TNRQVT+ KRRNGL KKA+EL+VLCDA V++I+FSS +L+EY N+ + +D Y+ T+++++ QY Q+ KL + + L+ + +G+ L L ++EL++LE+ +E +R +K + L +IE +K+ Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTVLCDARVSIIMFSSSNKLHEYISPNTTTKEIVDLYQ----------TISDVDVWATQYERMQETKRKLLETNRNLRTQIKQRLGECLDELDIQELRRLEDEMENTFKLVRERKFKSLGNQIETTKKK 153
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: MADS4_ORYSJ (MADS-box transcription factor 4 OS=Oryza sativa subsp. japonica GN=MADS4 PE=1 SV=3) HSP 1 Score: 113.62 bits (283), Expect = 9.678e-25 Identity = 68/177 (38.42%), Postives = 100/177 (56.50%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNSNIRSTIDRYKKACSD-NSNSGTVT-EINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCLRIKIAEME 625 MGRGKIEIKRIEN+TNRQVTF KRR G+LKKA E+ VLCDAEV +++FSS G+L +Y S + +NSG + + + E +++++ +Q RH+ G+ L+SL KEL +E L G +R K ++ ++ E LE+E L ++ + E Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRAGILKKAREIGVLCDAEVGVVIFSSAGKLSDYCTPKTTSVFPPLSRILEKYQTNSGKILWDEKHKSLSAEIDRVKKENDNMQIELRHMKGEDLNSLQPKELIAIEEALNNGQANLRDK----MMDHWRMHKRNEKMLEDEHKMLAFRVHQQE 173
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: TT16_ARATH (Protein TRANSPARENT TESTA 16 OS=Arabidopsis thaliana GN=TT16 PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.651e-24 Identity = 77/190 (40.53%), Postives = 109/190 (57.37%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNSNIR--STIDRYKKACSDNSNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFL--QKREIELENESV--CLRIKIAEMERFQQANMVT 652 MGRGKIEIK+IEN T RQVTF KRR GL+KK ELS+LCDA + LIVFS+ G+L E+ + R IDRY N + + E LR++ L+ R G L+S+ EL LE +LE + ++R +K+E++ ++E L ++R +E +N ++ L A ME FQQA + T Sbjct: 1 MGRGKIEIKKIENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCSEQNRMPQLIDRY---LHTNGLRLPDHHDDQEQLHHEMELLRRETCNLELRLRPFHGHDLASIPPNELDGLERQLEHSVLKVRERKNELMQQQLENLSRKRRMLEEDNNNMYRWLHEHRAAME-FQQAGIDT 186 The following BLAST results are available for this feature:
BLAST of FC931535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 123
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931535 ID=FC931535; Name=FC931535; organism=Citrus clementina; type=EST; length=680bpback to top |