FC931535
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: MAD30_ORYSJ (MADS-box transcription factor 30 OS=Oryza sativa subsp. japonica GN=MADS30 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.651e-24 Identity = 62/169 (36.69%), Postives = 106/169 (62.72%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNSNIRSTIDRYKKACSDNSNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSL-TVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQK--REIELENESVC 598 MG+GKIE+KRIE+ T RQVTF KRR G LKKA EL+VLCDA+V ++VFS +G+L+++ + + ++ + + T + + E +LR +I L+ S R G+ LSS+ TV EL QL+ +LE ++++ ++K E++ ++E +++ + + +N +C Sbjct: 1 MGQGKIEMKRIEDATRRQVTFSKRRAGFLKKANELAVLCDAQVGVVVFSDKGKLFDFCSPPVILMELFHRYEITTRNTRLQETNRDDEQMVMEITRLRNEIDQLEASLRRQTGEDLSSVSTVDELSQLQLQLESSLSKVHARKDELMSQQLEDMRRMHQTVHEQNNFLC 169
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: DEFA_ANTMA (Floral homeotic protein DEFICIENS OS=Antirrhinum majus GN=DEFA PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.384e-23 Identity = 63/163 (38.65%), Postives = 101/163 (61.96%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY--SNSNIRSTIDRYKKACSDNSNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELE 583 M RGKI+IKRIEN TNRQVT+ KRRNGL KKA+ELSVLCDA+V++I+ SS +L+EY + + D+Y+KA + S + + Q+ KL + + L+ R MG+SL+ L +++ L ++ + IR +K++++ +I+ +K+ +E Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELSVLCDAKVSIIMISSTQKLHEYISPTTATKQLFDQYQKAVGVDLWSS-----HYEKMQEHLKKLNEVNRNLRREIRQRMGESLNDLGYEQIVNLIEDMDNSLKLIRERKYKVISNQIDTSKKKVRNVE 158
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: AGL31_ARATH (Agamous-like MADS-box protein AGL31 OS=Arabidopsis thaliana GN=AGL31 PE=2 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 3.113e-23 Identity = 63/174 (36.21%), Postives = 107/174 (61.49%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYE-YSNSNIRSTIDRYKKACSDNSNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCLRIKIAE 619 MGR K+EIKRIEN ++RQVTF KRRNGL++KA +LS+LC++ +A++V S G+LY+ S N+ IDRY+ +D + + E Y L++ ++++Q+ L ++ + +V L LE +LE ++ R++K E+++ E++ LQK E L E+ L ++ + Sbjct: 1 MGRKKVEIKRIENKSSRQVTFSKRRNGLIEKARQLSILCESSIAVLVVSGSGKLYKSASGDNMSKIIDRYEIHHADELEALDLAEKTRNY-----LPLKELLEIVQSK---LEESNVDNASVDTLISLEEQLETALSVTRARKTELMMGEVKSLQKTENLLREENQTLASQVGK 166
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: CMB2_DIACA (MADS-box protein CMB2 OS=Dianthus caryophyllus GN=CMB2 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.310e-23 Identity = 66/190 (34.74%), Postives = 107/190 (56.32%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNS--NIRSTIDRYKKACSDNSNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENESVCLRIKIAEME-RFQQANMVTGQE 661 MGRGK+EI++IEN TNRQVTF KRRNG++KKA EL+VLCDA+V+L++ SS +L+ Y + +++ D Y+K + + Q++ K+ + +L+ MG L LT+ EL L+ +E I +IR+KK+ + + +K+ LE L + E+E +F+ G++ Sbjct: 1 MGRGKLEIRKIENKTNRQVTFSKRRNGIMKKAQELTVLCDAKVSLLMISSTHKLHHYLSPGVSLKKMYDEYQKI-----EGVDLWRKQWERMQEQHRKVLELNSLLRREISRRMGGDLEGLTLVELSALQQEMEEAIIQIRNKKYHTIKNQTGTTRKKIKNLEERHTDL---VMELEAKFRGPQFAIGED 182
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: MAD32_ORYSJ (MADS-box transcription factor 32 OS=Oryza sativa subsp. japonica GN=MADS32 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.183e-22 Identity = 68/181 (37.57%), Postives = 105/181 (58.01%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSN---SNIRSTIDRYKKACSDNSNSGTVTEINAQYYQQESAKLRQ---QIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQK--REIELENESVCLRIKIAE 619 MGRG+ EIKRIEN T RQ TF KRR+GL KKA EL+VLCDA++ L++FS+ G+LY + + ++R ++RY+ + T T++ A Q+ A+L + +L+ R + D TV L+ LE+ LE + ++RS+K + EI +LQ R + E +C +I A+ Sbjct: 1 MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELAVLCDADLLLLLFSASGKLYHFLSPTVPSVREFVERYE--------ATTHTKVWADIRQERRAELEKVGSMCDLLEKQLRFMTVDDGEEYTVPSLEALEHNLEAAMRKVRSEKDRKIGGEICYLQNIIRGRQEERYGLCDKIAHAQ 173
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: AP32_ASAEU (MADS-box protein AeAP3-2 (Fragment) OS=Asarum europaeum GN=AP3-2 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.914e-21 Identity = 56/140 (40.00%), Postives = 94/140 (67.14%), Query Frame = 2 Query: 179 GLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNSNI--RSTIDRYKKACSDNSNSGTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQKREIELENES 592 GLLKKA EL++LCDA++ +I+FSS G+++E+S+ I R IDRY+K + N V + N Q Y E +++ +I LQ + RH G+ L+SLT+ E+ QLE +LE + ++RS+K ++L +++ L+++E LE ++ Sbjct: 2 GLLKKARELAILCDAQLGVIIFSSSGKMFEFSSPPISMREIIDRYQKL---SGNCAPVYD-NQQVYC-EITRMKNEIDKLQATMRHFAGEDLTSLTMNEMLQLEQQLEISVNKVRSRKEQLLQQQLDNLRRKENMLEEQN 136
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: SRFC_DICDI (Serum factor response C OS=Dictyostelium discoideum GN=srfC PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.427e-17 Identity = 43/89 (48.31%), Postives = 61/89 (68.54%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNSNIRSTIDRYKKACSDNSNSGTVTEINAQY 367 MGR KI I++I N NRQ TF KR+NGL+KKA ELS+LCD E+A+IVFSS +L++YS+ ++ + RY +DN+++ N Y Sbjct: 3 MGRNKITIEKISNERNRQATFTKRKNGLIKKAMELSILCDCEIAMIVFSSNNKLFQYSSRDMDKLLIRY----TDNTDNTRKNLTNQDY 87
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: MEF2B_HUMAN (Myocyte-specific enhancer factor 2B OS=Homo sapiens GN=MEF2B PE=1 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 3.686e-16 Identity = 44/85 (51.76%), Postives = 63/85 (74.12%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNSNIRSTIDRYKKACSDNSNSGTVTEI 355 MGR KI+I RI + NRQVTF KR+ GL+KKAYELSVLCD E+ALI+F+S RL++Y+++++ + +Y + S+ S T T+I Sbjct: 1 MGRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSANRLFQYASTDMDRVLLKYTE-YSEPHESRTNTDI 84
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: MEF2A_PIG (Myocyte-specific enhancer factor 2A OS=Sus scrofa GN=MEF2A PE=2 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 4.814e-16 Identity = 42/85 (49.41%), Postives = 64/85 (75.29%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNSNIRSTIDRYKKACSDNSNSGTVTEI 355 MGR KI+I RI + NRQVTF KR+ GL+KKAYELSVLCD E+ALI+F+S +L++Y+++++ + +Y + ++ SGT ++I Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLLKYTE-YNEPHESGTNSDI 84
BLAST of FC931535 vs. ExPASy Swiss-Prot
Match: MEF2A_RAT (Myocyte-specific enhancer factor 2A OS=Rattus norvegicus GN=Mef2a PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.287e-16 Identity = 42/94 (44.68%), Postives = 64/94 (68.09%), Query Frame = 2 Query: 101 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNSNIRSTI---DRYKKACSDNSNSGTVTEINAQYYQ 373 MGR KI+I RI + NRQVTF KR+ GL+KKAYELSVLCD E+ALI+F+S +L++Y+++++ + Y + +NS V +N + ++ Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLLKYTEYNEPHESRTNSDIVEALNKKEHR 94 The following BLAST results are available for this feature:
BLAST of FC931535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 123
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931535 ID=FC931535; Name=FC931535; organism=Citrus clementina; type=EST; length=680bpback to top |