FC931537
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931537 vs. ExPASy Swiss-Prot
Match: RL4A_XENLA (60S ribosomal protein L4-A OS=Xenopus laevis GN=rpl4-A PE=2 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 2.829e-70 Identity = 127/209 (60.77%), Postives = 158/209 (75.60%), Query Frame = 1 Query: 82 RPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPGGGTHRADQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGIRPGKGKMRNRRYISRKGPLVV 708 RPLI+V S +G+ + V +P V +A IRPDIV FVH+N+ KN+RQPYAVS+ AGHQTSAESWGTGRAV+RIPRV GGGTHR+ QGAFGNMCRGGRMFAPTK WRRWHR++N QKRY P+L+M++GH+IE +PE+PLVV D ES +KT A+ +LK++ A+ D +K SQ +R GKGKMRNRR I R+GP V+ Sbjct: 9 RPLISVYSEKGE---SSGKNVTMPAVFRAPIRPDIVNFVHTNLRKNNRQPYAVSKLAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAVCSALAASALPALIMSKGHRIEEIPEVPLVVEDKVESYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCVI 214
BLAST of FC931537 vs. ExPASy Swiss-Prot
Match: RL4_MACFA (60S ribosomal protein L4 OS=Macaca fascicularis GN=RPL4 PE=2 SV=1) HSP 1 Score: 264.618 bits (675), Expect = 3.695e-70 Identity = 129/209 (61.72%), Postives = 155/209 (74.16%), Query Frame = 1 Query: 82 RPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPGGGTHRADQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGIRPGKGKMRNRRYISRKGPLVV 708 RPLI+V S +G+ + V LP V KA IRPDIV FVH+N+ KN+RQPYAVS AGHQTSAESWGTGRAV+RIPRV GGGTHR+ QGAFGNMCRGGRMFAPTK WRRWHR++N QKRY P+LVM++GH IE VPE+PLVV D E +KT A+ +LK++ A+ D +K SQ +R GKGKMRNRR I R+GP ++ Sbjct: 5 RPLISVYSEKGE---SSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHSIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCII 210
BLAST of FC931537 vs. ExPASy Swiss-Prot
Match: RL4_PONAB (60S ribosomal protein L4 OS=Pongo abelii GN=RPL4 PE=2 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 6.303e-70 Identity = 129/209 (61.72%), Postives = 155/209 (74.16%), Query Frame = 1 Query: 82 RPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPGGGTHRADQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGIRPGKGKMRNRRYISRKGPLVV 708 RPLI+V S +G+ + V LP V KA IRPDIV FVH+N+ KN+RQPYAVS AGHQTSAESWGTGRAV+RIPRV GGGTHR+ QGAFGNMCRGGRMFAPTK WRRWHR++N QKRY P+LVM++GH+IE VPE+PLVV D E +KT A+ +LK++ A D +K SQ +R GKGKMRNRR I R+GP ++ Sbjct: 5 RPLISVYSEKGE---SSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKARNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCII 210
BLAST of FC931537 vs. ExPASy Swiss-Prot
Match: RL4A_SCHPO (60S ribosomal protein L4-A OS=Schizosaccharomyces pombe GN=rpl4a PE=1 SV=2) HSP 1 Score: 260.766 bits (665), Expect = 5.335e-69 Identity = 123/209 (58.85%), Postives = 158/209 (75.60%), Query Frame = 1 Query: 82 RPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPGGGTHRADQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGIRPGKGKMRNRRYISRKGPLVV 708 RP +++ S +G ++ S T+ LP V KA IRPD+V VH+ ++KN RQPYAVS KAGHQTSAESWGTGRA++RIPRV GGGTHR+ Q AFGNMCR GRMFAPTK WR+WH K+N N+KRY PSL++ARGH+IE +PE+PLVV D+ +S +KT A+ +LK+I AY D K +S+ +R GKGK+RNRR++ R+GPLVV Sbjct: 5 RPTVSIYSKDGSVS---SETIALPFVFKAPIRPDLVRSVHTAVAKNKRQPYAVSEKAGHQTSAESWGTGRALARIPRVGGGGTHRSGQAAFGNMCRSGRMFAPTKTWRKWHVKVNQNEKRYAISSAVAASGVPSLLLARGHRIEEIPEVPLVVDDAVQSFQKTKEAVALLKEIKAYRDVVKVANSRKLRAGKGKLRNRRHVQRRGPLVV 210
BLAST of FC931537 vs. ExPASy Swiss-Prot
Match: RL4B_SCHPO (60S ribosomal protein L4-B OS=Schizosaccharomyces pombe GN=rpl4b PE=2 SV=1) HSP 1 Score: 258.455 bits (659), Expect = 2.648e-68 Identity = 122/209 (58.37%), Postives = 158/209 (75.60%), Query Frame = 1 Query: 82 RPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPGGGTHRADQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGIRPGKGKMRNRRYISRKGPLVV 708 RP +++ + +G ++ S T+ LP V KA IRPD+V VH+ ++KN RQPYAVS KAGHQTSAESWGTGRA++RIPRV GGGTHR+ Q AFGNMCR GRMFAPTK WR+WH K+N N+KRY PSL++ARGH+IE +PE+PLVV D+ +S +KT A+ +LK+I AY D K +S+ +R GKGK+RNRR++ R+GPLVV Sbjct: 5 RPTVSIYNKDGSVS---SETLALPFVFKAPIRPDLVRSVHTAVAKNKRQPYAVSEKAGHQTSAESWGTGRALARIPRVGGGGTHRSGQAAFGNMCRSGRMFAPTKTWRKWHVKVNQNEKRYAIASAVAASGVPSLLLARGHRIEEIPEVPLVVDDAVQSFQKTKEAVALLKEIKAYRDVIKVANSRKLRAGKGKLRNRRHVQRRGPLVV 210
BLAST of FC931537 vs. ExPASy Swiss-Prot
Match: RL4B_YEAST (60S ribosomal protein L4-B OS=Saccharomyces cerevisiae GN=RPL4B PE=1 SV=2) HSP 1 Score: 250.751 bits (639), Expect = 5.521e-66 Identity = 124/209 (59.33%), Postives = 153/209 (73.21%), Query Frame = 1 Query: 82 RPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPGGGTHRADQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGIRPGKGKMRNRRYISRKGPLVV 708 RP +TV SL G+ +A +PLP V A IRPDIV V ++++KN RQ YAVS KAGHQTSAESWGTGRAV+RIPRV GGGT R+ QGAFGNMCRGGRMFAPTK WR+W+ K+N N+KRY SLV+ARGH++E +PE+PLVVS ES++KT A+ LK +GA++D K S+ +R GKGK RNRR+ R+GPLVV Sbjct: 3 RPQVTVHSLTGEATANA---LPLPAVFSAPIRPDIVHTVFTSVNKNKRQAYAVSEKAGHQTSAESWGTGRAVARIPRVGGGGTGRSGQGAFGNMCRGGRMFAPTKTWRKWNVKVNHNEKRYATASAIAATAVASLVLARGHRVEKIPEIPLVVSTDLESIQKTKEAVAALKAVGAHSDLLKVLKSKKLRAGKGKYRNRRWTQRRGPLVV 208
BLAST of FC931537 vs. ExPASy Swiss-Prot
Match: RL4A_YEAST (60S ribosomal protein L4-A OS=Saccharomyces cerevisiae GN=RPL4A PE=1 SV=4) HSP 1 Score: 250.751 bits (639), Expect = 5.521e-66 Identity = 124/209 (59.33%), Postives = 153/209 (73.21%), Query Frame = 1 Query: 82 RPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPGGGTHRADQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGIRPGKGKMRNRRYISRKGPLVV 708 RP +TV SL G+ +A +PLP V A IRPDIV V ++++KN RQ YAVS KAGHQTSAESWGTGRAV+RIPRV GGGT R+ QGAFGNMCRGGRMFAPTK WR+W+ K+N N+KRY SLV+ARGH++E +PE+PLVVS ES++KT A+ LK +GA++D K S+ +R GKGK RNRR+ R+GPLVV Sbjct: 3 RPQVTVHSLTGEATANA---LPLPAVFSAPIRPDIVHTVFTSVNKNKRQAYAVSEKAGHQTSAESWGTGRAVARIPRVGGGGTGRSGQGAFGNMCRGGRMFAPTKTWRKWNVKVNHNEKRYATASAIAATAVASLVLARGHRVEKIPEIPLVVSTDLESIQKTKEAVAALKAVGAHSDLLKVLKSKKLRAGKGKYRNRRWTQRRGPLVV 208
BLAST of FC931537 vs. ExPASy Swiss-Prot
Match: RL4_DICDI (60S ribosomal protein L4 OS=Dictyostelium discoideum GN=rpl4 PE=1 SV=1) HSP 1 Score: 244.588 bits (623), Expect = 3.957e-64 Identity = 117/190 (61.58%), Postives = 146/190 (76.84%), Query Frame = 1 Query: 142 VPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPGGGTHRADQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVV-SDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGIRPGKGKMRNRRYISRKGPLVV 708 V LP+V+ IRPD+V FVH+N++KN+RQ Y + AG QTSAESWGTGRAV+RIPRVPG GTHR+ QGAFGNMCRGGRM+ P K WRRW+RK+NVNQKRY P+LVMARGH+I + E+PLV+ ++S ++++KT AA+++LK+I AYAD K DS+ IR G GK RNRRY RKGPLVV Sbjct: 20 VKLPNVLTTPIRPDLVNFVHTNLNKNARQAYGAAPYAGEQTSAESWGTGRAVARIPRVPGSGTHRSGQGAFGNMCRGGRMYGPNKTWRRWNRKVNVNQKRYAVVSALAASAVPALVMARGHRINGINEVPLVIANESVDTLQKTKAAVELLKKINAYADVTKVIDSKHIRAGAGKARNRRYKVRKGPLVV 209
BLAST of FC931537 vs. ExPASy Swiss-Prot
Match: RL4_TRYBB (60S ribosomal protein L4 OS=Trypanosoma brucei brucei GN=RPL4 PE=3 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 2.565e-63 Identity = 119/209 (56.94%), Postives = 149/209 (71.29%), Query Frame = 1 Query: 82 RPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPGGGTHRADQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGIRPGKGKMRNRRYISRKGPLVV 708 RP ++V S D T LP V A IR D+V FVH+N++KNSRQPYAV+R +G + S ESWGTGRAV+RIPR+ GGGT + GAFGNMCRGGRMFAPTKI+RRWHRKIN++QKR+ P+LVM+RGHKIE V E+PLVV D + EKT A+ LK +GA D + DS+ IR G+GKMRNRRY++R+GP++V Sbjct: 4 RPSVSVYSASEDKVV---GTCSLPAVFTAPIRHDVVQFVHTNMAKNSRQPYAVNRLSGMKHSTESWGTGRAVARIPRIHGGGTSMSGAGAFGNMCRGGRMFAPTKIFRRWHRKINLHQKRFAVVSALAASSLPALVMSRGHKIENVAEVPLVVEDGVRAYEKTKEAMTFLKTVGAIDDVNRVNDSRQIRAGRGKMRNRRYVARRGPMLV 209
BLAST of FC931537 vs. ExPASy Swiss-Prot
Match: RL4_DROME (60S ribosomal protein L4 OS=Drosophila melanogaster GN=RpL4 PE=2 SV=2) HSP 1 Score: 241.121 bits (614), Expect = 4.375e-63 Identity = 120/209 (57.42%), Postives = 152/209 (72.73%), Query Frame = 1 Query: 82 RPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPGGGTHRADQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGIRPGKGKMRNRRYISRKGPLVV 708 RPL++V + + + A D + + LP V KA IRPD+V VH + +N+RQ YAVS AGHQTSAESWGTGRAV+RIPRV GGGTHR+ QGAFGNMCRGGRMFAPTK +RRWHRK+NVNQ+RY P+LV ++GH I+ V E PLVVSD + V+KT A+ L+++ +AD +K SQ R G+G MR+RR I+R+GPLVV Sbjct: 7 RPLVSVYTEKNEPAKDKN--ICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRGPLVV 213 The following BLAST results are available for this feature:
BLAST of FC931537 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931537 ID=FC931537; Name=FC931537; organism=Citrus clementina; type=EST; length=708bpback to top |