FC931538
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931538 vs. ExPASy Swiss-Prot
Match: SODM_NOCAS (Superoxide dismutase [Mn] OS=Nocardia asteroides GN=sodA PE=3 SV=2) HSP 1 Score: 158.688 bits (400), Expect = 2.670e-38 Identity = 84/172 (48.84%), Postives = 107/172 (62.21%), Query Frame = 1 Query: 151 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYK 666 TLPDL YDYSALEP ISG+I +LHH KHH AYV N A+E+L A D S + + + F+ GGHVNHSI+WKNL+P GG+ P L AID FGS + + +A LQGSGW LG DT ++L+ +Q V ++PLL +D+WEHA+YLQYK Sbjct: 5 TLPDLDYDYSALEPHISGQINELHHSKHHAAYVAGANTALEKLEAAREAGDHSAIFLHEKNLAFHLGGHVNHSIWWKNLSP---NGGDKPVGELAAAIDDQFGSFDKFRAQFTAAANGLQGSGWAVLGYDTLGQKLLTFQLYDQQANVPLG--IIPLLQVDMWEHAFYLQYK 171
BLAST of FC931538 vs. ExPASy Swiss-Prot
Match: SODM_EPTST (Superoxide dismutase [Mn], mitochondrial (Fragment) OS=Eptatretus stoutii PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 4.554e-38 Identity = 83/147 (56.46%), Postives = 99/147 (67.35%), Query Frame = 1 Query: 196 ISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDV 636 IS EIMQLHH KHH AYV N N E+L +AL K D +T V LQ A +FNGGGH+NHSIFW+NL+P GGG+P L AI+ FGS++ L +K+ A +QGSGW WLG + E KRL + T ANQDPL L PLLGIDV Sbjct: 2 ISAEIMQLHHSKHHAAYVNNVNVVEEKLAEALGKGDVNTQVSLQPAFRFNGGGHINHSIFWRNLSP--SGGGQPCGDLLK-AIENDFGSVDKLREKLVAAAVGVQGSGWAWLGFNKESKRLQIATCANQDPL-QGTTGLFPLLGIDV 144
BLAST of FC931538 vs. ExPASy Swiss-Prot
Match: SODM_PETMA (Superoxide dismutase [Mn], mitochondrial (Fragment) OS=Petromyzon marinus PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.952e-37 Identity = 84/148 (56.76%), Postives = 98/148 (66.22%), Query Frame = 1 Query: 196 ISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPT-LVPLLGIDV 636 IS IMQLHH KHH YV N N A ++L +A+ K D + + LQ AIKFNGGGH+NHSIFW NL+P GG P L AI+T FGS L +KMSA A+QGSGW WLG D E RL + ANQDPL +A T L+PLLGIDV Sbjct: 2 ISANIMQLHHSKHHATYVNNLNVAEQKLAEAVAKGDVTAEIALQPAIKFNGGGHINHSIFWTNLSP---NGGGAPTGDLQKAIETDFGSFTKLQEKMSAVSVAVQGSGWGWLGYDKETGRLRIAACANQDPL--QATTGLIPLLGIDV 144
BLAST of FC931538 vs. ExPASy Swiss-Prot
Match: SODM_MYCLE (Superoxide dismutase [Mn] OS=Mycobacterium leprae GN=sodA PE=3 SV=3) HSP 1 Score: 155.221 bits (391), Expect = 2.952e-37 Identity = 82/172 (47.67%), Postives = 107/172 (62.21%), Query Frame = 1 Query: 151 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYK 666 TLPDL +DY+ALEP ISGEI ++HH KHH AYV N A+ +L +A K D S + + + F+ GGHVNHSI+WKNL+P GG+ P L ID FGS + + SA LQGSGW LG DT +L+ +Q V+ ++PLL +D+WEHA+YLQYK Sbjct: 5 TLPDLDWDYAALEPHISGEINEIHHTKHHAAYVKGVNDALAKLDEARAKDDHSAIFLNEKNLAFHLGGHVNHSIWWKNLSP---NGGDKPTGGLATDIDETFGSFDKFRAQFSAAANGLQGSGWAVLGYDTLGNKLLTFQLYDQQANVSLG--IIPLLQVDMWEHAFYLQYK 171
BLAST of FC931538 vs. ExPASy Swiss-Prot
Match: SODM_MYCFO (Superoxide dismutase [Mn] OS=Mycobacterium fortuitum GN=sodA PE=3 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 3.855e-37 Identity = 82/172 (47.67%), Postives = 105/172 (61.05%), Query Frame = 1 Query: 151 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYK 666 TLPDL YDY ALEP ISG+I +LHH KHH AYV N AV +L +A D + + + + F+ GGHVNHSI+WKNL+P GG+ P L AID FGS + + +A LQGSGW LG D+ RL+ +Q V ++PLL +D+WEHA+YLQYK Sbjct: 5 TLPDLDYDYGALEPHISGQINELHHSKHHAAYVKGVNDAVAKLDEARANGDHAAIFLNEKNLAFHLGGHVNHSIWWKNLSP---NGGDKPTGDLAAAIDDQFGSFDKFQAQFTAAANGLQGSGWAVLGYDSLGDRLLTFQLYDQQANVPLG--IIPLLQVDMWEHAFYLQYK 171
BLAST of FC931538 vs. ExPASy Swiss-Prot
Match: SODM_CORDI (Superoxide dismutase [Mn] OS=Corynebacterium diphtheriae GN=sodA PE=3 SV=2) HSP 1 Score: 153.68 bits (387), Expect = 8.588e-37 Identity = 87/175 (49.71%), Postives = 104/175 (59.43%), Query Frame = 1 Query: 145 TVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVV-QLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYK 666 T LP+L Y Y ALEP I+ EIM+LHH KHH YV N A+E+L +A + VV L + FN GGH NHSIFWKNL+P GGGEP +L AI FGS E SA LQGSGW LG D RLV+E +Q + + L PLL +D+WEHA+YLQYK Sbjct: 2 TYALPELDYAYDALEPHIAAEIMELHHSKHHANYVNGANAALEKLQKARENGEIGAVVTALSKDLAFNLGGHTNHSIFWKNLSP--NGGGEPT-GALAEAIAKEFGSFEKFKDHFSAAALGLQGSGWAVLGYDHIGGRLVIEQLTDQQGNI--SANLTPLLMLDMWEHAFYLQYK 171
BLAST of FC931538 vs. ExPASy Swiss-Prot
Match: SODM_THET8 (Superoxide dismutase [Mn] OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=sodA PE=1 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 2.499e-36 Identity = 83/179 (46.37%), Postives = 112/179 (62.57%), Query Frame = 1 Query: 154 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQ--------LQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYK 666 LPDL Y Y ALEP I + M++HHQKHH AYVTN N A+E+ + L+ V+ +++ +Q A++ NGGGH+NHS+FW+ L P GG + P L AID FG +AL +K++ GSGW WL D F +L V +T NQD V + T P++GIDVWEHAYYL+Y+ Sbjct: 7 LPDLGYPYEALEPHIDAKTMEIHHQKHHGAYVTNLNAALEK-YPYLHGVEVEVLLRHLAALPQDIQTAVRNNGGGHLNHSLFWRLLTP---GGAKEPVGELKKAIDEQFGGFQALKEKLTQAAMGRFGSGWAWLVKD-PFGKLHVLSTPNQDNPVMEGFT--PIVGIDVWEHAYYLKYQ 178
BLAST of FC931538 vs. ExPASy Swiss-Prot
Match: SODM_THET2 (Superoxide dismutase [Mn] OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=sodA PE=3 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 2.499e-36 Identity = 83/179 (46.37%), Postives = 112/179 (62.57%), Query Frame = 1 Query: 154 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQ--------LQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYK 666 LPDL Y Y ALEP I + M++HHQKHH AYVTN N A+E+ + L+ V+ +++ +Q A++ NGGGH+NHS+FW+ L P GG + P L AID FG +AL +K++ GSGW WL D F +L V +T NQD V + T P++GIDVWEHAYYL+Y+ Sbjct: 7 LPDLGYPYEALEPHIDAKTMEIHHQKHHGAYVTNLNAALEK-YPYLHGVEVEVLLRHLAALPQDIQTAVRNNGGGHLNHSLFWRLLTP---GGAKEPVGELKKAIDEQFGGFQALKEKLTQAAMGRFGSGWAWLVKD-PFGKLHVLSTPNQDNPVMEGFT--PIVGIDVWEHAYYLKYQ 178
BLAST of FC931538 vs. ExPASy Swiss-Prot
Match: SODM_MYCSM (Superoxide dismutase [Mn] OS=Mycobacterium smegmatis GN=sodA PE=1 SV=4) HSP 1 Score: 152.14 bits (383), Expect = 2.499e-36 Identity = 79/172 (45.93%), Postives = 104/172 (60.47%), Query Frame = 1 Query: 151 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYK 666 TLPDL YDY ALEP ISG+I +LHH KHH YV N A+ +L +A D + + + + F+ GGH+NHSI+WKNL+P GG+ P L AID FGS + + +A LQGSGW LG D+ RL+ +Q V ++PLL +D+WEHA+YLQYK Sbjct: 5 TLPDLDYDYGALEPHISGQINELHHSKHHATYVKGVNDAIAKLEEARANGDHAAIFLNEKNLAFHLGGHINHSIWWKNLSP---NGGDKPTGELAAAIDDQFGSFDKFQAQFTAAANGLQGSGWAVLGYDSLGGRLLTFQLYDQQANVPLG--IIPLLQVDMWEHAFYLQYK 171
BLAST of FC931538 vs. ExPASy Swiss-Prot
Match: SODM_MYCS2 (Superoxide dismutase [Mn] OS=Mycobacterium smegmatis GN=sodA PE=1 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.499e-36 Identity = 79/172 (45.93%), Postives = 104/172 (60.47%), Query Frame = 1 Query: 151 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYK 666 TLPDL YDY ALEP ISG+I +LHH KHH YV N A+ +L +A D + + + + F+ GGH+NHSI+WKNL+P GG+ P L AID FGS + + +A LQGSGW LG D+ RL+ +Q V ++PLL +D+WEHA+YLQYK Sbjct: 5 TLPDLDYDYGALEPHISGQINELHHSKHHATYVKGVNDAIAKLEEARANGDHAAIFLNEKNLAFHLGGHINHSIWWKNLSP---NGGDKPTGELAAAIDDQFGSFDKFQAQFTAAANGLQGSGWAVLGYDSLGGRLLTFQLYDQQANVPLG--IIPLLQVDMWEHAFYLQYK 171 The following BLAST results are available for this feature:
BLAST of FC931538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931538 ID=FC931538; Name=FC931538; organism=Citrus clementina; type=EST; length=684bpback to top |