FC931541
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA7_CARAU (Proteasome subunit alpha type-7 OS=Carassius auratus GN=psma7 PE=2 SV=1) HSP 1 Score: 308.145 bits (788), Expect = 2.748e-83 Identity = 154/212 (72.64%), Postives = 181/212 (85.38%), Query Frame = 1 Query: 58 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE---TSGQETIKLAIRALLEVVESGGKNIEVAVM 684 ARYDRAITVFSPDGHLFQVEYA EAV+KG+ AVG+RG D +VLGVEKKS KLQ+ R+VRKI +LD H+ +A AGL ADAR++INRAR+ECQSHRLTVEDPVTVEYITRYIA L+Q+YTQS G RPFG+S LIVGFD + G P LYQTDPSGT+ AWKANA GR++ ++REFLEKNY + S + IKLAI+ALLEVV+SGGKNIE+AV+ Sbjct: 3 ARYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGKDIVVLGVEKKSVAKLQEERTVRKICALDEHVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIATLKQRYTQSNGRRPFGISALIVGFD-FDGTPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTDEAIASDNDAIKLAIKALLEVVQSGGKNIELAVI 213
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA7L_MOUSE (Proteasome subunit alpha type-7-like OS=Mus musculus GN=Psma8 PE=2 SV=1) HSP 1 Score: 307.375 bits (786), Expect = 4.688e-83 Identity = 153/212 (72.17%), Postives = 185/212 (87.26%), Query Frame = 1 Query: 58 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE---TSGQETIKLAIRALLEVVESGGKNIEVAVM 684 +RYDRAITVFSPDGHLFQVEYA EAV+KG+ AVG+RGT+ +VLGVEKKS KLQD R+VRKI +LD+H+ +A AGL ADARV+I+RAR+ECQSH+LTVEDPVTVEYITR+IA L+QKYTQS G RPFG+S LIVGFD G+P LYQTDPSGT+ AWKANA GR++ ++REFLEKNY E ++ +E IKLAI+ALLEVV+SGGKNIE+A++ Sbjct: 3 SRYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGTNIVVLGVEKKSVAKLQDERTVRKICALDDHVCMAFAGLTADARVVISRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDD-DGIPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAISNDKEAIKLAIKALLEVVQSGGKNIELAII 213
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA7_MOUSE (Proteasome subunit alpha type-7 OS=Mus musculus GN=Psma7 PE=1 SV=1) HSP 1 Score: 304.679 bits (779), Expect = 3.039e-82 Identity = 154/210 (73.33%), Postives = 179/210 (85.24%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQE---TIKLAIRALLEVVESGGKNIEVAVM 684 YDRAITVFSPDGHLFQVEYA EAV+KG+ AVGVRG D +VLGVEKKS KLQD R+VRKI +LD+++ +A AGL ADAR++INRAR+ECQSHRLTVEDPVTVEYITRYIA L+Q+YTQS G RPFG+S LIVGFD + G P LYQTDPSGT+ AWKANA GR + S+REFLEKNY + + + TIKL I+ALLEVV+SGGKNIE+AVM Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFD-FDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDDAIETDDLTIKLVIKALLEVVQSGGKNIELAVM 211
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA7_HUMAN (Proteasome subunit alpha type-7 OS=Homo sapiens GN=PSMA7 PE=1 SV=1) HSP 1 Score: 304.679 bits (779), Expect = 3.039e-82 Identity = 154/210 (73.33%), Postives = 179/210 (85.24%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQE---TIKLAIRALLEVVESGGKNIEVAVM 684 YDRAITVFSPDGHLFQVEYA EAV+KG+ AVGVRG D +VLGVEKKS KLQD R+VRKI +LD+++ +A AGL ADAR++INRAR+ECQSHRLTVEDPVTVEYITRYIA L+Q+YTQS G RPFG+S LIVGFD + G P LYQTDPSGT+ AWKANA GR + S+REFLEKNY + + + TIKL I+ALLEVV+SGGKNIE+AVM Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGRDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFD-FDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKALLEVVQSGGKNIELAVM 211
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA7_BOVIN (Proteasome subunit alpha type-7 OS=Bos taurus GN=PSMA7 PE=1 SV=1) HSP 1 Score: 304.679 bits (779), Expect = 3.039e-82 Identity = 154/210 (73.33%), Postives = 179/210 (85.24%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQE---TIKLAIRALLEVVESGGKNIEVAVM 684 YDRAITVFSPDGHLFQVEYA EAV+KG+ AVGVRG D +VLGVEKKS KLQD R+VRKI +LD+++ +A AGL ADAR++INRAR+ECQSHRLTVEDPVTVEYITRYIA L+Q+YTQS G RPFG+S LIVGFD + G P LYQTDPSGT+ AWKANA GR + S+REFLEKNY + + + TIKL I+ALLEVV+SGGKNIE+AVM Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFD-FDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKALLEVVQSGGKNIELAVM 211
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA7_PONAB (Proteasome subunit alpha type-7 OS=Pongo abelii GN=PSMA7 PE=2 SV=2) HSP 1 Score: 301.212 bits (770), Expect = 3.360e-81 Identity = 152/210 (72.38%), Postives = 178/210 (84.76%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQE---TIKLAIRALLEVVESGGKNIEVAVM 684 YDRAITVFSPDGHLFQVEYA EA++KG+ AVGVRG D +VLGVEKKS KLQD R+VRKI +LD+++ +A AGL ADAR++INRAR+ECQSHRLTVED VTVEYITRYIA L+Q+YTQS G RPFG+S LIVGFD + G P LYQTDPSGT+ AWKANA GR + S+REFLEKNY + + + TIKL I+ALLEVV+SGGKNIE+AVM Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAIKKGSTAVGVRGRDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDSVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFD-FDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKALLEVVQSGGKNIELAVM 211
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA7L_HUMAN (Proteasome subunit alpha type-7-like OS=Homo sapiens GN=PSMA8 PE=1 SV=3) HSP 1 Score: 300.056 bits (767), Expect = 7.484e-81 Identity = 154/218 (70.64%), Postives = 182/218 (83.49%), Query Frame = 1 Query: 58 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACA------GLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE---TSGQETIKLAIRALLEVVESGGKNIEVAVM 684 +RYDRAITVFSPDGHLFQVEYA EAV+KG+ AVG+RGT+ +VLGVEKKS KLQD R+VRKI +LD+H+ +A A GL ADARV+INRAR+ECQSH+LTVEDPVTVEYITR+IA L+QKYTQS G RPFG+S LIVGFD G+ LYQTDPSGT+ AWKANA GR++ ++REFLEKNY E S E IKLAI+ALLEVV+SGGKNIE+A++ Sbjct: 3 SRYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGTNIVVLGVEKKSVAKLQDERTVRKICALDDHVCMAFAVLTIFIGLTADARVVINRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDD-DGISRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIASDSEAIKLAIKALLEVVQSGGKNIELAII 219
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA7B_XENLA (Proteasome subunit alpha type-7-B OS=Xenopus laevis GN=psma7-B PE=2 SV=1) HSP 1 Score: 300.056 bits (767), Expect = 7.484e-81 Identity = 152/210 (72.38%), Postives = 178/210 (84.76%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQE---TIKLAIRALLEVVESGGKNIEVAVM 684 YDRAITVFSPDGHLFQVEYA EAV+KG+ AVGVRG + +VLGVEKKS KLQD R+VRKI +LD ++ +A AGL ADAR++INRAR+ECQSHRLTVEDPVTVEYITRYIA L+Q+YTQS G RPFG+S LIVGFD + G P LYQTDPSGT+ AWKANA GR + S+REFLEK+Y + + + TIKL I+ALLEVV+SGGKNIE+AVM Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKEIVVLGVEKKSVAKLQDERTVRKICALDENVFMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFD-FDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKHYTDEAIETDDLTIKLVIKALLEVVQSGGKNIELAVM 211
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA7A_XENLA (Proteasome subunit alpha type-7-A OS=Xenopus laevis GN=psma7-A PE=2 SV=1) HSP 1 Score: 300.056 bits (767), Expect = 7.484e-81 Identity = 152/210 (72.38%), Postives = 178/210 (84.76%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQE---TIKLAIRALLEVVESGGKNIEVAVM 684 YDRAITVFSPDGHLFQVEYA EAV+KG+ AVGVRG + +VLGVEKKS KLQD R+VRKI +LD ++ +A AGL ADAR++INRAR+ECQSHRLTVEDPVTVEYITRYIA L+Q+YTQS G RPFG+S LIVGFD + G P LYQTDPSGT+ AWKANA GR + S+REFLEK+Y + + + TIKL I+ALLEVV+SGGKNIE+AVM Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKEIVVLGVEKKSVAKLQDERTVRKICALDENVFMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFD-FDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKHYTDEAIETDDLTIKLVIKALLEVVQSGGKNIELAVM 211
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA7_RAT (Proteasome subunit alpha type-7 OS=Rattus norvegicus GN=Psma7 PE=1 SV=1) HSP 1 Score: 295.434 bits (755), Expect = 1.843e-79 Identity = 153/216 (70.83%), Postives = 178/216 (82.41%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACA------GLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQE---TIKLAIRALLEVVESGGKNIEVAVM 684 YDRAITVFSPDGHLFQVEYA EAV+KG+ AVGVRG D +VLGVEKKS KLQD R+VRKI +LD+++ +A A GL ADAR++INRAR+ECQSHRLTV DPVTVEYITRYIA L+Q+YTQS G RPFG+S LIVGFD + G P LYQTDPSGT+ AWKANA GR + S+REFLEKNY + + + TIKL I+ALLEVV+SGGKNIE+AVM Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGRDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAVVASVSGLTADARIVINRARVECQSHRLTVGDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFD-FDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDDAIETDDLTIKLVIKALLEVVQSGGKNIELAVM 217 The following BLAST results are available for this feature:
BLAST of FC931541 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 177
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931541 ID=FC931541; Name=FC931541; organism=Citrus clementina; type=EST; length=688bpback to top |