FC931541
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA4_CAEEL (Proteasome subunit alpha type-4 OS=Caenorhabditis elegans GN=pas-3 PE=2 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 1.930e-36 Identity = 81/212 (38.21%), Postives = 128/212 (60.38%), Query Frame = 1 Query: 61 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKL-QDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQETIKLAIRALLEV--VESGGKNIEVAVMT 687 RYD T+FSP+G L+QVEYA+EA+ +G+ ++ IV+ E+K+ KL DS K+ L ++I+ AG+ ADA +LIN R S+R + + + VE + + + +Q+YTQ GG RPFG+S L +G+D + G LYQ+DPSG ++ WKA G N + L++ YK + +E +LAI+ L + V+ + +E+AV+T Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILSSEGIVVAAERKNVHKLLDDSVMTEKVYRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVEQLVQNLCNEKQRYTQIGGKRPFGVSLLYIGWDKHYGY-QLYQSDPSGNYTGWKATCIGSNHQAAVTLLKQEYKSPNLEEAKQLAIKVLWKTLDVKLASEKVEMAVLT 214
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA2_SCHPO (Probable proteasome subunit alpha type-2 OS=Schizosaccharomyces pombe GN=SPCC1442.06 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.930e-36 Identity = 90/214 (42.06%), Postives = 131/214 (61.21%), Query Frame = 1 Query: 61 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQS--HRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYK-ETSGQETIKLAIRALLEVVES--GGKNIEVAVMT 687 +Y ++T FSP+G L Q+EYAL AV G +VG++ TD +VL EKK T +L S+ K+ ++ I + +G+ D RVL++++R Q+ ++ E P T + + + IA + Q+ TQSGGVRPFG+S L+ G D PSLYQ DPSGT+ AWKA A G++S + + FLEK Y E + + AI AL E E NIE+AV++ Sbjct: 4 KYAFSLTTFSPNGKLVQIEYALNAVNAGVTSVGIKATDGVVLATEKKPTSELAIGASLEKVCAITPDIGMVYSGMGPDFRVLVDKSRKVAQTTYKKIYNEYPPT-KILVQEIASVMQESTQSGGVRPFGVSLLVAGMDEKG--PSLYQVDPSGTYFAWKATAIGKSSTAAKTFLEKRYNDELELDDAVHTAILALKETFEGELTEDNIEIAVVS 214
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA2_ORYSJ (Proteasome subunit alpha type-2 OS=Oryza sativa subsp. japonica GN=PAB1 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.930e-36 Identity = 83/212 (39.15%), Postives = 127/212 (59.91%), Query Frame = 1 Query: 58 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSG-QETIKLAIRALLEVVES--GGKNIEVAVM 684 ++Y ++T FSP G L Q+E+AL AV G ++G++ + +V+ EKK L D SV+KI SL +I + +G+ D RVL+ ++R + Q + ++ + V + R A + Q++TQSGGVRPFG+S LI G+D P LYQ DPSG++ +WKA+A G+N ++ + FLEK Y E + I AI L E E NIE+ ++ Sbjct: 4 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKAANGVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYD--DNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGYEGQISANNIEIGII 213
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA2_ORYSI (Proteasome subunit alpha type-2 OS=Oryza sativa subsp. indica GN=PAB1 PE=2 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 1.930e-36 Identity = 83/212 (39.15%), Postives = 127/212 (59.91%), Query Frame = 1 Query: 58 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSG-QETIKLAIRALLEVVES--GGKNIEVAVM 684 ++Y ++T FSP G L Q+E+AL AV G ++G++ + +V+ EKK L D SV+KI SL +I + +G+ D RVL+ ++R + Q + ++ + V + R A + Q++TQSGGVRPFG+S LI G+D P LYQ DPSG++ +WKA+A G+N ++ + FLEK Y E + I AI L E E NIE+ ++ Sbjct: 4 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKAANGVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYD--DNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGYEGQISANNIEIGII 213
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA2_NEUCR (Probable proteasome subunit alpha type-2 OS=Neurospora crassa GN=B14D6.510 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.521e-36 Identity = 84/212 (39.62%), Postives = 128/212 (60.38%), Query Frame = 1 Query: 61 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRAR-IECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE-TSGQETIKLAIRALLEVVES--GGKNIEVAVM 684 RY ++T FSP G L Q+EYAL AV +G A+G++ T+ IVL EKKS+ L D S+ KI + +I + +G+ D RVL++RAR + ++ + + + +A + Q+ TQSGGVRP+G+S LI G+D G P LYQ DPSG++ WKA A G+N+ + + FLEK Y E ++ + +A+ L E +E G IE+ ++ Sbjct: 4 RYSFSLTTFSPSGKLVQIEYALNAVNQGVTALGIKATNGIVLATEKKSSSPLADPSSLSKISLITPNIGMVYSGMGPDYRVLVDRARKVSHTGYKRIYNEYPPTRILVQDVARVMQEATQSGGVRPYGVSLLIAGWD--EGGPMLYQVDPSGSYFPWKATAIGKNATTAKTFLEKRYTEGLELEDAVHIALLTLKETIEGEMNGDTIEIGIV 213
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA2A_ARATH (Proteasome subunit alpha type-2-A OS=Arabidopsis thaliana GN=PAB1 PE=1 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.292e-36 Identity = 82/209 (39.23%), Postives = 127/209 (60.77%), Query Frame = 1 Query: 58 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSG-QETIKLAIRALLEVVES--GGKNIEV 675 ++Y ++T FSP G L Q+E+AL AV G ++G++ ++ +V+ EKK L D SV+KI L +I + +G+ D RVL+ ++R + + + ++P+ V + R A + Q++TQSGGVRPFG+S L+ G+D P LYQ DPSG++ +WKA+A G+N ++ + FLEK Y E + I AI L E E KNIE+ Sbjct: 4 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEASVQKIQHLTPNIGVVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSGGVRPFGVSLLVAGYDDKG--PQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGFEGEISSKNIEI 210
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA5_DICDI (Proteasome subunit alpha type-5 OS=Dictyostelium discoideum GN=psmA5 PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.615e-36 Identity = 89/219 (40.64%), Postives = 132/219 (60.27%), Query Frame = 1 Query: 58 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGG------VRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKET-SGQETIKLAIRALLEVVESG--GKNIEVAVMT 687 + YDR + FSP+G LFQVEYALEA++ G +GV+ + +VL VEK+ T L + S++K+V +D H+ A +GL ADAR +I+ ARIE Q+HR +P+ VE + I L ++ ++ RPFG++ LI G D PSLY +DPSGTF+ + A A G S + L++ Y +T + E KLA+ L +V+E N+E+AV+T Sbjct: 6 SEYDRGVNTFSPEGRLFQVEYALEAIKLG---IGVQCEEGVVLAVEKRLTSPLLEPSSIQKVVEIDYHLICALSGLVADARTIIDHARIETQNHRFNYNEPMGVESCVQSICDLALRFGENRNSGEERMSRPFGVALLIAGIDEKG--PSLYYSDPSGTFTQFHAKAIGAGSEGAQTTLQEKYSKTLTIAECQKLALTTLKQVMEEAITTTNVELAVIT 219
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA2B_ARATH (Proteasome subunit alpha type-2-B OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.615e-36 Identity = 82/209 (39.23%), Postives = 126/209 (60.29%), Query Frame = 1 Query: 58 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSG-QETIKLAIRALLEVVES--GGKNIEV 675 ++Y ++T FSP G L Q+E+AL AV G ++G++ ++ +V+ EKK L D SV+KI L +I +G+ D RVL+ ++R + + + ++P+ V + R A + Q++TQSGGVRPFG+S L+ G+D P LYQ DPSG++ +WKA+A G+N ++ + FLEK Y E + I AI L E E KNIE+ Sbjct: 4 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEASVQKIQHLTPNIGTVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSGGVRPFGVSLLVAGYDDKG--PQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGFEGEISSKNIEI 210
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA5_ENTHI (Proteasome subunit alpha type-5 OS=Entamoeba histolytica PE=3 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 7.334e-36 Identity = 85/215 (39.53%), Postives = 130/215 (60.47%), Query Frame = 1 Query: 67 DRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGG-----VRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNY-KETSGQETIKLAIRALLEVVES--GGKNIEVAVMT 687 D + FS +G LFQVEYA EA++ G+ +G++ + +VL VEK+ + L S+ KI+ +D+HI A +GL ADAR LI+ AR+E Q+HR ++P+ VE + + I+ L ++ + RPFG++ LI G D TG P L+QTDPSG F + A ATG + + + L + Y K + +E LA+ L +V+E KN+EVA++T Sbjct: 9 DHGVNTFSSEGRLFQVEYATEAMKLGSTVIGIQTKEGVVLAVEKRISSPLMLGSSIEKIIEIDDHIGAAVSGLTADARTLIDNARLEAQNHRFMYDEPINVEVVAQAISDLSLRFGEGSRKKKVMSRPFGVALLIAGVDE-TG-PRLFQTDPSGMFIEFYAKATGAGTEAAQSILHEKYNKSMTLREAEILALSTLKQVMEEKLNSKNVEVALVT 221
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA4_SCHPO (Probable proteasome subunit alpha type-4 OS=Schizosaccharomyces pombe GN=SPAC13C5.01c PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 7.334e-36 Identity = 84/213 (39.44%), Postives = 126/213 (59.15%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKL-QDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSG-QETIKLAIRALLEVVESGG---KNIEVAVMT 687 YD T+FSP+G L+QVEYALEA+ A+G+ D IVL EKK T KL + S K+ + +++ A AGL ADA +LIN AR Q + T + + E + R + L+Q YTQ GG+RPFG+S L G+D G L+Q++PSG + +W+AN+ G NS S++ + + YK+ E +A++ L + ++S + IE A +T Sbjct: 5 YDSRTTIFSPEGRLYQVEYALEAINHAGVALGIVAKDGIVLAAEKKVTSKLLEQEESAEKLYHIGDNMLCAVAGLTADANILINYARRVGQQYLQTFNEEMPCEQLVRRVCDLKQGYTQYGGLRPFGVSFLYAGWDHIRGY-QLFQSNPSGNYGSWQANSIGGNSTSVQSLMRQEYKDDINLDEASAMAVKFLSKTLDSNSLTHEKIEFATIT 216 The following BLAST results are available for this feature:
BLAST of FC931541 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 177
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931541 ID=FC931541; Name=FC931541; organism=Citrus clementina; type=EST; length=688bpback to top |