FC931541
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA4_HUMAN (Proteasome subunit alpha type-4 OS=Homo sapiens GN=PSMA4 PE=1 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 9.578e-36 Identity = 82/217 (37.79%), Postives = 128/217 (58.99%), Query Frame = 1 Query: 61 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSV-RKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQETIK----LAIRAL---LEVVESGGKNIEVAVMT 687 RYD T+FSP+G L+QVEYA+EA+ +G+ D ++L E+++ KL D KI L+ +A + AG+ +DA VL N R+ Q + L ++P+ E + + ++Q YTQ GG RPFG+S L +G+D + G LYQ+DPSG + WKA G NS + L+++YKE G+ T+K LAI+ L ++V + + +E+A +T Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGF-QLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKE--GEMTLKSALALAIKVLNKTMDVSKLSAEKVEIATLT 217
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA4_BOVIN (Proteasome subunit alpha type-4 OS=Bos taurus GN=PSMA4 PE=1 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 9.578e-36 Identity = 82/217 (37.79%), Postives = 128/217 (58.99%), Query Frame = 1 Query: 61 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSV-RKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQETIK----LAIRAL---LEVVESGGKNIEVAVMT 687 RYD T+FSP+G L+QVEYA+EA+ +G+ D ++L E+++ KL D KI L+ +A + AG+ +DA VL N R+ Q + L ++P+ E + + ++Q YTQ GG RPFG+S L +G+D + G LYQ+DPSG + WKA G NS + L+++YKE G+ T+K LAI+ L ++V + + +E+A +T Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGF-QLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKE--GEMTLKSALALAIKVLNKTMDVSKLSAEKVEIATLT 217
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA2_DICDI (Proteasome subunit alpha type-2 OS=Dictyostelium discoideum GN=psmA2 PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 9.578e-36 Identity = 87/213 (40.85%), Postives = 129/213 (60.56%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQETIKLAIRALLEVVESGGK------NIEVAVM 684 Y ++T FSP G L Q+E+AL+A G +A+G++ + +VL EKK L D SV+KI + +I L AG+ D+RVLI +AR E + + ++ + V + R +A + Q++TQSGGVRPFG+S L+ GFD P LYQ DPSG++ AWKA A G+N S + FLEK Y S I+ AI+ L ++ G + N+E+A++ Sbjct: 5 YSFSLTTFSPSGKLVQIEHALQAAASGGSAIGIKAKNGVVLITEKKLH-SLVDVTSVQKISMITENIGLVYAGMGPDSRVLIKKARKESEKYYKQYKEKIPVLQLVRELASIMQEFTQSGGVRPFGVSLLVAGFDEKG--PHLYQVDPSGSYFAWKATAIGKNMVSSKTFLEKRY---SDDLEIEDAIQTALITIKEGFETQLTEFNMELAII 211
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA4_RAT (Proteasome subunit alpha type-4 OS=Rattus norvegicus GN=Psma4 PE=1 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.251e-35 Identity = 81/217 (37.33%), Postives = 128/217 (58.99%), Query Frame = 1 Query: 61 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSV-RKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQETIK----LAIRAL---LEVVESGGKNIEVAVMT 687 RYD T+FSP+G L+QVEYA+EA+ +G+ D ++L E+++ KL D KI L+ +A + AG+ +DA VL N R+ Q + L ++P+ E + + ++Q YTQ GG RPFG+S L +G+D + G LYQ+DPSG + WKA G NS + L+++YKE G+ T+K LA++ L ++V + + +E+A +T Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGF-QLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKE--GEMTLKSALALAVKVLNKTMDVSKLSAEKVEIATLT 217
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA4_MOUSE (Proteasome subunit alpha type-4 OS=Mus musculus GN=Psma4 PE=1 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.251e-35 Identity = 81/217 (37.33%), Postives = 128/217 (58.99%), Query Frame = 1 Query: 61 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSV-RKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQETIK----LAIRAL---LEVVESGGKNIEVAVMT 687 RYD T+FSP+G L+QVEYA+EA+ +G+ D ++L E+++ KL D KI L+ +A + AG+ +DA VL N R+ Q + L ++P+ E + + ++Q YTQ GG RPFG+S L +G+D + G LYQ+DPSG + WKA G NS + L+++YKE G+ T+K LA++ L ++V + + +E+A +T Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGF-QLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKE--GEMTLKSALALAVKVLNKTMDVSKLSAEKVEIATLT 217
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA4_MACFA (Proteasome subunit alpha type-4 OS=Macaca fascicularis GN=PSMA4 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.134e-35 Identity = 81/217 (37.33%), Postives = 128/217 (58.99%), Query Frame = 1 Query: 61 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSV-RKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQETIK----LAIRAL---LEVVESGGKNIEVAVMT 687 RYD T+FSP+G L+QVEYA+EA+ +G+ D ++L E+++ KL D KI L+ +A + AG+ +DA VL N R+ Q + L ++P+ E + + ++Q YTQ GG RPFG+S L +G+D + G LYQ+DP+G + WKA G NS + L+++YKE G+ T+K LAI+ L ++V + + +E+A +T Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGF-QLYQSDPNGNYGGWKATCIGNNSAAAVSMLKQDYKE--GEMTLKSALALAIKVLNKTMDVSKLSAEKVEIATLT 217
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA5_DROME (Proteasome subunit alpha type-5 OS=Drosophila melanogaster GN=Prosalpha5 PE=1 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 8.108e-35 Identity = 83/220 (37.73%), Postives = 126/220 (57.27%), Query Frame = 1 Query: 58 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGG-------VRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYK-ETSGQETIKLAIRALLEVVES--GGKNIEVAVMT 687 + YDR + FSP+G LFQVEYA+EA++ G+ A+G+ + +VL VEK+ T L +V KIV +D HI A +GL ADAR LI RAR+ECQ+H + +++E + ++ L ++ SG RPFG++ L G + G P L+ DPSGTF A A G S ++ L+ ++ + + E I +++ L +V+E N+EV MT Sbjct: 6 SEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLMVPSTVEKIVEVDKHIGCATSGLMADARTLIERARVECQNHWFVYNERMSIESCAQAVSTLAIQFGDSGDSDGAAAMSRPFGVAILFAGIE--AGQPQLWHMDPSGTFVRHGAKAIGSGSEGAQQNLQDLFRPDLTLDEAIDISLNTLKQVMEEKLNSTNVEVMTMT 223
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA2_CAEEL (Proteasome subunit alpha type-2 OS=Caenorhabditis elegans GN=pas-2 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 8.108e-35 Identity = 87/211 (41.23%), Postives = 119/211 (56.40%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRAR-IECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKET----SGQETIKLAIRALLEVVESGGKNIEVAV 681 Y ++T FSP G L Q+EYAL AV+ G +VG+R D +VL E +V D V +I HI +G+ D R+L+ +AR I + + E+ T++ +T IA + Q+YTQSGGVRPFG S LI G+D G P L+Q DPSG + AWKA A G+N + + FLEK + E G T L +R + V N+EVAV Sbjct: 5 YGFSLTTFSPSGKLMQIEYALNAVKNGQPSVGLRAKDGVVLATENVGSVLTDDQPKVEQI---SKHIGCVYSGMGPDFRILVKKARKIAMEYEMMYGEEMPTIQLVTD-IAAVMQEYTQSGGVRPFGASLLIAGWDKNPGRPLLFQCDPSGAYFAWKATALGKNDVNAKTFLEKRFSEALELDDGIHTALLTLRESFD-VGMNENNVEVAV 210
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA5_MOUSE (Proteasome subunit alpha type-5 OS=Mus musculus GN=Psma5 PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.806e-34 Identity = 83/217 (38.25%), Postives = 129/217 (59.45%), Query Frame = 1 Query: 58 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGG-----VRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNY-KETSGQETIKLAIRALLEVVES--GGKNIEVAVM 684 + YDR + FSP+G LFQVEYA+EA++ G+ A+G++ ++ + L VEK+ T L + S+ KIV +D HI A +GL ADA+ LI++AR+E Q+H T + +TVE +T+ ++ L ++ + RPFG++ L G D P L+ DPSGTF A A G S + L++ Y K + +E IK ++ L +V+E NIE+A + Sbjct: 6 SEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKG--PQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLIILKQVMEEKLNATNIELATV 220
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA5_HUMAN (Proteasome subunit alpha type-5 OS=Homo sapiens GN=PSMA5 PE=1 SV=3) HSP 1 Score: 145.976 bits (367), Expect = 1.806e-34 Identity = 83/217 (38.25%), Postives = 129/217 (59.45%), Query Frame = 1 Query: 58 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGG-----VRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNY-KETSGQETIKLAIRALLEVVES--GGKNIEVAVM 684 + YDR + FSP+G LFQVEYA+EA++ G+ A+G++ ++ + L VEK+ T L + S+ KIV +D HI A +GL ADA+ LI++AR+E Q+H T + +TVE +T+ ++ L ++ + RPFG++ L G D P L+ DPSGTF A A G S + L++ Y K + +E IK ++ L +V+E NIE+A + Sbjct: 6 SEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKG--PQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLIILKQVMEEKLNATNIELATV 220 The following BLAST results are available for this feature:
BLAST of FC931541 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 177
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931541 ID=FC931541; Name=FC931541; organism=Citrus clementina; type=EST; length=688bpback to top |