FC931541
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA5_BOVIN (Proteasome subunit alpha type-5 OS=Bos taurus GN=PSMA5 PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.806e-34 Identity = 83/217 (38.25%), Postives = 129/217 (59.45%), Query Frame = 1 Query: 58 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGG-----VRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNY-KETSGQETIKLAIRALLEVVES--GGKNIEVAVM 684 + YDR + FSP+G LFQVEYA+EA++ G+ A+G++ ++ + L VEK+ T L + S+ KIV +D HI A +GL ADA+ LI++AR+E Q+H T + +TVE +T+ ++ L ++ + RPFG++ L G D P L+ DPSGTF A A G S + L++ Y K + +E IK ++ L +V+E NIE+A + Sbjct: 6 SEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKG--PQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLIILKQVMEEKLNATNIELATV 220
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA5_RAT (Proteasome subunit alpha type-5 OS=Rattus norvegicus GN=Psma5 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 5.256e-34 Identity = 83/217 (38.25%), Postives = 128/217 (58.99%), Query Frame = 1 Query: 58 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGG-----VRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNY-KETSGQETIKLAIRALLEVVES--GGKNIEVAVM 684 + YDR + FSP+G LFQVEYA+E + G+ A+G++ ++ + L VEK+ T L + S+ KIV +D HI A +GL ADA+ LI++AR+E Q+H T + +TVE +T+ ++ L ++ + RPFG++ L G D P L+ DPSGTF A A G S + L++ Y K T+ +E IK ++ L +V+E NIE+A + Sbjct: 6 SEYDRGVNTFSPEGRLFQVEYAIEGHKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKG--PQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSTTLKEAIKSSLIILKQVMEEKLNATNIELATV 220
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSMA2_HALVO (Proteasome subunit alpha 2 OS=Halobacterium volcanii GN=psmA2 PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.529e-33 Identity = 85/210 (40.48%), Postives = 122/210 (58.10%), Query Frame = 1 Query: 52 DMARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE-TSGQETIKLAIRALL---EVVESGGKNI 669 D YDR ++FSPDG ++QVEYA EAV++G +GVR D +VL + + +L ++ S+ K+ LD+ + A AG ADAR L++ AR Q L +P+ VE +T+ I Q+ TQSGG RP+G S LI G + G L+ TDPSGT WKA A G + ++ LE Y E S ++ + LA+ AL+ E +ES N+ Sbjct: 5 DKQAYDRGTSLFSPDGRIYQVEYAREAVKRGAPVLGVRTADGVVLAALRSTPSELMEAESIEKLHKLDDALGAATAGHVADARKLVDFARTTAQREHLRYGEPIGVETLTKTITDNIQESTQSGGTRPYGASLLIGGVE--NGSGRLFATDPSGTPQEWKAVAIGGHREDVQAALEDGYAEDLSLEDGLALAVEALVAADEEIESDELNL 212
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA6A_ARATH (Proteasome subunit alpha type-6-A OS=Arabidopsis thaliana GN=PAA1 PE=1 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 1.529e-33 Identity = 83/212 (39.15%), Postives = 118/212 (55.66%), Query Frame = 1 Query: 58 ARYDRAITVFSPDGHLFQVEYALEAVRK-GNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSG---QETIKLAIRALLEVVESGGKNIEVAV 681 A YDR IT+FSP+G LFQVEYA +AV+ G ++GVRG D++ + +KK KL D SV + + +I L G+ ADAR L+ +AR + R T + V+ + ++IA Q YTQ +RP G+ +++G D G P LY+ DP+G F KA + G FLEK KE ET++ AI AL V++ K E+ V Sbjct: 7 AGYDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVTHLFPITKYIGLVATGITADARSLVQQARNQAAEFRFTYGYEMPVDILAKWIADKSQVYTQHAYMRPLGVVAMVMGVDEENG-PLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPSFTFDETVQTAISALQSVLQEDFKATEIEV 217
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA2_YEAST (Proteasome component Y7 OS=Saccharomyces cerevisiae GN=PRE8 PE=1 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.407e-33 Identity = 81/212 (38.21%), Postives = 128/212 (60.38%), Query Frame = 1 Query: 61 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRAR-IECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYK-ETSGQETIKLAIRALLEVVES--GGKNIEVAVM 684 RY ++T FSP G L Q++YAL AV++G ++G++ T+ +V+ EKKS+ L S ++ K+ L I +G+ D RVL++++R + S++ + + + +A + Q+ TQSGGVRPFG+S LI G D + G SLYQ DPSG++ WKA A G+ S + + FLEK + E ++ I +A+ L E VE G IE+A++ Sbjct: 4 RYSFSLTTFSPSGKLGQIDYALTAVKQGVTSLGIKATNGVVIATEKKSSSPLAMSETLSKVSLLTPDIGAVYSGMGPDYRVLVDKSRKVAHTSYKRIYGEYPPTKLLVSEVAKIMQEATQSGGVRPFGVSLLIAGHDEFNGF-SLYQVDPSGSYFPWKATAIGKGSVAAKTFLEKRWNDELELEDAIHIALLTLKESVEGEFNGDTIELAII 214
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA5_CAEEL (Proteasome subunit alpha type-5 OS=Caenorhabditis elegans GN=pas-5 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.811e-33 Identity = 79/216 (36.57%), Postives = 129/216 (59.72%), Query Frame = 1 Query: 58 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKY----TQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKET-SGQETIKLAIRALLEVVES--GGKNIEVAVM 684 + YDR + FSP+G LFQVEYA+EAV+ G+ ++G++ ++ ++L EK+ST KL + ++ KI +D HI + AGL AD+R L+ RA+IE Q+ T + VE +T+ +A L ++ ++ RPFG++ L G D L+ DPSGTF KA + G S+ + L++ Y + + +E +K+A+ L +V+E N+EV V+ Sbjct: 6 SEYDRGVNTFSPEGRLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLMVNDAIEKISKVDQHIGVTFAGLIADSRTLVERAQIEAQNFWFTYNRKIRVEDVTQSVANLALQFGDDDVKASMSRPFGVAMLFAGVDQEGA--KLFHLDPSGTFIDCKAKSIGAASDGAEQNLKEQYHDALTIKEGLKMALAILKQVMEEKLNSANVEVVVI 219
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA5_YEAST (Proteasome component PUP2 OS=Saccharomyces cerevisiae GN=PUP2 PE=1 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 7.589e-33 Identity = 77/205 (37.56%), Postives = 120/205 (58.54%), Query Frame = 1 Query: 58 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGG------VRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNS-NSMREFLEKNYKETSGQETIKLAIRALLEVVE 651 + YDR ++ FSP+G LFQVEY+LEA++ G+ A+G+ + +VLGVEK++T L +S S+ KIV +D HI A +GL ADAR +I AR +H L ++ + VE +T+ + L ++ + RPFG++ LI G D G L+ +PSGTF + A A G S + E L + + + +E L ++ L +V+E Sbjct: 6 SEYDRGVSTFSPEGRLFQVEYSLEAIKLGSTAIGIATKEGVVLGVEKRATSPLLESDSIEKIVEIDRHIGCAMSGLTADARSMIEHARTAAVTHNLYYDEDINVESLTQSVCDLALRFGEGASGEERLMSRPFGVALLIAGHDADDGY-QLFHAEPSGTFYRYNAKAIGSGSEGAQAELLNEWHSSLTLKEAELLVLKILKQVME 209
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA6_TOBAC (Proteasome subunit alpha type-6 OS=Nicotiana tabacum GN=PAA1 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.691e-32 Identity = 81/210 (38.57%), Postives = 118/210 (56.19%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRK-GNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKET---SGQETIKLAIRALLEVVESGGKNIEVAV 681 YDR IT+FSP+G LFQVEYA +AV+ G ++GVRG D++ + +KK KL D SV + + ++ L G+ ADAR L+ +AR E R + V+ ++++IA Q YTQ +RP G+ +I+G D G P L++ DP+G F KA + G FLEK K S +ET++ AI AL V++ K E+ V Sbjct: 9 YDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQTSVSHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFKYGYEMPVDVLSKWIADKSQVYTQHAYMRPLGVVAMILGIDEEKG-PQLFKCDPAGHFFGHKATSAGSKEQEAINFLEKKMKNDPAFSYEETVQTAISALQSVLQEDFKASEIEV 217
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA6_SOYBN (Proteasome subunit alpha type-6 OS=Glycine max GN=PAA1 PE=2 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 3.766e-32 Identity = 80/210 (38.10%), Postives = 117/210 (55.71%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRK-GNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSG---QETIKLAIRALLEVVESGGKNIEVAV 681 Y+R IT+FSP+G LFQVEYA +AV+ G ++GVRG D+I + KK KL D+ SV + + ++ L G+ ADAR L+ +AR E R T + V+ + ++IA Q YTQ +RP G+ +++G D G P LY+ DP+G + KA + G FLEK K +ET++ AI AL V++ K E+ V Sbjct: 9 YNRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSICVVTHKKVPDKLLDNTSVTHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFTYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEYG-PQLYKCDPAGHYFGHKATSAGLKDQEAINFLEKKMKNDPSFTYEETVQTAISALQSVLQEDFKATEIEV 217
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA6B_ARATH (Proteasome subunit alpha type-6-B OS=Arabidopsis thaliana GN=PAA2 PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.425e-32 Identity = 80/212 (37.74%), Postives = 116/212 (54.72%), Query Frame = 1 Query: 58 ARYDRAITVFSPDGHLFQVEYALEAVRK-GNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSG---QETIKLAIRALLEVVESGGKNIEVAV 681 A YDR IT+FSP+G LFQVEYA +AV+ G ++GVRG D++ + +KK KL D SV + + ++ L G+ AD+R L+ +AR E R + + + ++IA Q YTQ +RP G+ +++G D G P LY+ DP+G F KA + G FLEK KE ET++ AI AL V++ K E+ V Sbjct: 7 AGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVSHLFPVTKYLGLLATGMTADSRSLVQQARNEAAEFRFQYGYEMPADILAKWIADKSQVYTQHAYMRPLGVVAMVLGIDEERG-PLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPAFTYDETVQTAISALQSVLQEDFKATEIEV 217 The following BLAST results are available for this feature:
BLAST of FC931541 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 177
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931541 ID=FC931541; Name=FC931541; organism=Citrus clementina; type=EST; length=688bpback to top |