FC931541
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA6_DROME (Proteasome subunit alpha type-6 OS=Drosophila melanogaster GN=Prosalpha1 PE=2 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 4.309e-28 Identity = 76/214 (35.51%), Postives = 119/214 (55.61%), Query Frame = 1 Query: 58 ARYDRAITVFSPDGHLFQVEYALEAVRKGN-AAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYK-ETSGQETIKLAIRALLEV--VESGGKNIEVAVMT 687 A +DR IT+FSP+G L+QVEYA +A+ + N V ++ D V+ +KK T K +V + + I A G AD+R + +AR E + R + V+ + R IA + Q YTQ+ +RP G S +++ +D G PS+Y+TDP+G FS +KA + G + +LEK YK S ++ I+LAI L V ++ IE+ V++ Sbjct: 7 AGFDRHITIFSPEGRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKNIVPETVTHLFRITKDIGCAMTGRIADSRSQVQKARYEAANFRYKYGYEMPVDVLCRRIADINQVYTQNAEMRPLGCSMVLIAYDNEIG-PSVYKTDPAGYFSGFKACSVGAKTLEANSYLEKKYKPNLSEEKAIQLAISCLSSVLAIDFKPNGIEIGVVS 219
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA1_CHICK (Proteasome subunit alpha type-1 OS=Gallus gallus GN=PSMA1 PE=2 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 1.638e-27 Identity = 75/210 (35.71%), Postives = 117/210 (55.71%), Query Frame = 1 Query: 76 ITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSG---QETIKLAIRALLEVV----ESGGKNIEVAVM 684 +TV+SP G + Q+EYA+EAV++G+A VG++ VL K++ +L + +KI+ +DNHI ++ AGL ADAR+L N R EC R + P+ V + I Q TQ G RP+G+ LI G+D P ++QT PS + KA + G S S R +LE++ E + E +K +RAL E + + KN+ + ++ Sbjct: 9 VTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQ--KKILYVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYDDMG--PHIFQTCPSANYFDCKAMSIGARSQSARNYLERHMTEFTDCNLNELVKHGLRALRETLPAEQDLTTKNVSIGIV 214
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA5_ENCCU (Probable proteasome subunit alpha type-5 OS=Encephalitozoon cuniculi GN=PUP2 PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.648e-27 Identity = 68/219 (31.05%), Postives = 121/219 (55.25%), Query Frame = 1 Query: 55 MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGV-----RPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSG-QETIKLAIRALLEVVES--GGKNIEVAVMT 687 M + +++ +S +G + Q+EYA++A+ G +GVR + ++L EKK LQ+ +SV K + +HI L +G+ D + ++ R+R C SH + ++VE + +Y++ L ++ + RPFG+S +I GFD P LY DPSG++ ++KA A G + LE Y+E SG ++++ + L +V++ N+EV V+T Sbjct: 1 MEDFKQSVNTYSSEGRIHQIEYAMKAMNLGTTTIGVRTKEFVILCSEKKILSTLQNPKSVVKHYKIYDHIVLGFSGISGDTKTIVKRSRDFCISHTHMYGENISVERLLKYLSSLSLRFGEEDEAKMIFRRPFGVSLIIAGFDT---EPRLYSLDPSGSYISYKAKAIGSGHEVVEGILENEYEEYSGLDQSLRKVLCTLSKVMKDKISKDNVEVVVVT 216
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA3_DROME (Proteasome subunit alpha type-3 OS=Drosophila melanogaster GN=Prosalpha7 PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.648e-27 Identity = 66/194 (34.02%), Postives = 109/194 (56.19%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQETIKLAIRALLEV 645 YD + + FSPDG +FQ++YA +AV K +G+RG D +VL VEK T KL + + +I +++ +I +A AGL AD + + AR E ++R E + ++++ +AG YT VRPFGLS ++ +D G P LY+ +PSG+ + A A+G+ + +EK + E ++ A + +V Sbjct: 8 YDLSASQFSPDGRVFQIDYASKAVEKSGTVIGIRGKDAVVLAVEKIITSKLYEPDAGGRIFTIEKNIGMAVAGLVADGNFVADIARQEAANYRQQFEQAIPLKHLCHRVAGYVHAYTLYSAVRPFGLSIILASWDEVEG-PQLYKIEPSGSSFGYFACASGKAKQLAKTEMEKLKMDMRTDELVESAGEIIYKV 200
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA1_ORYSJ (Proteasome subunit alpha type-1 OS=Oryza sativa subsp. japonica GN=PAF1 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.365e-26 Identity = 71/200 (35.50%), Postives = 108/200 (54.00%), Query Frame = 1 Query: 61 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEK---NYKETSGQETIKLAIRALLEVVE 651 +YD +T +SP G LFQVEYA+EAV++G+A VG+R VL K+ +L + RK+ + +H +A AGL AD RVL R EC +H + P+ V + +A Q TQ RP+G+ L+ G D LY PSG + ++A A G S + + FLE+ Y + + ++ IK A+ A+ E ++ Sbjct: 5 QYDTDVTTWSPAGRLFQVEYAMEAVKQGSACVGLRSRTHAVLAAANKAASELSSHQ--RKVFRVADHAGVALAGLTADGRVLSRFLRSECINHAFVYDAPLPVSRLALRLADKAQVCTQRSWKRPYGVGLLVAGLD--ESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTFLERRFEGYNDYTPEQLIKDALSAIKETLQ 200
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA6_DICDI (Proteasome subunit alpha type-6 OS=Dictyostelium discoideum GN=psmA6 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.268e-26 Identity = 68/196 (34.69%), Postives = 111/196 (56.63%), Query Frame = 1 Query: 58 ARYDRAITVFSPDGHLFQVEYALEAVRKGN-AAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQS--HRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYK---ETSGQETIKLAI 627 A YD +I +FSP G L+Q+EYA +A++ G +VG+RG D +V+ +KK KL D +SV + L ++I G+ D++ +RA EC + H+ + P V + + +A + Q TQ RP G++ +++G D G P L++ DP+G F+ +KA A G FLEK +K + S ETI++++ Sbjct: 7 AGYDMSI-IFSPQGKLYQIEYAFKAIKTGGLTSVGIRGKDCVVVATQKKIPDKLIDPKSVTSLYKLTDYIGCVQTGIVPDSKSQASRAIQECATFHHKFGYQIPPNV--LAKRMADIAQLSTQHASARPLGVAMILIGIDDELG-PQLFKVDPAGVFTGYKATAAGEKEQESTNFLEKKFKSNPQLSKDETIQVSL 198
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA1_SCHPO (Probable proteasome subunit alpha type-1 OS=Schizosaccharomyces pombe GN=SPAC6G10.04c PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 8.986e-26 Identity = 73/215 (33.95%), Postives = 118/215 (54.88%), Query Frame = 1 Query: 61 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKN---YKETSGQETIKLAIRALLEVV----ESGGKNIEVAVM 684 +YD T +SP G L QVEYALEA+++G+A VG+ VL K++ +L + +K++ +D+HI +A AGL DARVL N + E S + P+ V + +A Q TQ G RP+G+ L++G+D P L + PSG + + G S S R ++E+N + ++S +E I A+RAL + + E +N+ ++V+ Sbjct: 5 QYDGDATTWSPQGRLHQVEYALEAIKQGSATVGLVSKTHAVLVALKRNAEELSSYQ--KKLIRIDDHIGIAIAGLAPDARVLSNYMKQEALSSKTLFTRPIPVRRLMSKVAEKAQINTQEYGRRPYGVGFLVIGYD--ESGPHLLEFQPSGLVLEYLGTSMGSRSQSARTYIERNLDTFPDSSREELILSALRALRDTLSKDQELTEENVSISVI 215
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA3_YEAST (Proteasome component C1 OS=Saccharomyces cerevisiae GN=PRE10 PE=1 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 2.002e-25 Identity = 70/195 (35.90%), Postives = 103/195 (52.82%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEK----NYKETSGQETIKLAIRAL 636 YD + +VFSPDG FQVEYA++AV G ++G++ D +V VEK T KL + KI +D HI +GL D R L+NR R E S + + P+ + + Q +T VRPFG+ST+ G D LY +PSG++ +K ATG+ S + LEK + + S +E +K A + + Sbjct: 8 YDLSNSVFSPDGRNFQVEYAVKAVENGTTSIGIKCNDGVVFAVEKLITSKLLVPQKNVKIQVVDRHIGCVYSGLIPDGRHLVNRGREEAASFKKLYKTPIPIPAFADRLGQYVQAHTLYNSVRPFGVSTIFGGVD--KNGAHLYMLEPSGSYWGYKGAATGKGRQSAKAELEKLVDHHPEGLSAREAVKQAAKII 200
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA3_ACACA (Proteasome subunit alpha type-3 (Fragment) OS=Acanthamoeba castellanii PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.607e-25 Identity = 69/195 (35.38%), Postives = 104/195 (53.33%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEK-NYKETSGQETIKLAIRALLEV 645 YD + T FSPDG +FQVEYA +AV A+G+R D +VL VEK K+ + R+I ++D H LA +GL AD R L++R R E S+R ++ + + ++ Q Y+ G VRPFG S ++ D P LY +PSG + A G+ + + + +EK E + +E IK A + + V Sbjct: 6 YDLSSTTFSPDGRVFQVEYAAKAVDNSGTALGLRVKDGVVLAVEKLLVSKMLVPNTNRRIHTVDRHCGLAMSGLVADGRQLVSRGRAEATSYREFYGTDISGKVLNERLSNFVQLYSLYGSVRPFGTSVILGCVD--KNGPQLYMIEPSGISWGYFGVAIGKGARAAKTEIEKLKLSEMTAREAIKEAAKIIYSV 198
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA3_ORYSJ (Proteasome subunit alpha type-3 OS=Oryza sativa subsp. japonica GN=PAG1 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 9.935e-25 Identity = 65/173 (37.57%), Postives = 95/173 (54.91%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEK 582 YD ++T FSPDG +FQVEYA +AV VG++ D IVLGVEK T K+ S R+I S+ H LA AGL AD R +++RA+ E S+ +P++V+ + +A T +RPFG ++ G+D P LY +PSG + A G+ + + +EK Sbjct: 8 YDLSVTTFSPDGRVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMMLEGSNRRIHSVHWHSGLAVAGLAADGRQIVSRAKSEAASYEKVYGEPISVKELADRVASYVHLCTLYWWLRPFGCGVILGGYD--RDGPQLYMIEPSGVSYKYFGAALGKGRQAAKTEIEK 178 The following BLAST results are available for this feature:
BLAST of FC931541 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 177
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931541 ID=FC931541; Name=FC931541; organism=Citrus clementina; type=EST; length=688bpback to top |