FC931541
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSMA_THEON (Proteasome subunit alpha OS=Thermococcus onnurineus (strain NA1) GN=psmA PE=3 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.333e-45 Identity = 103/212 (48.58%), Postives = 138/212 (65.09%), Query Frame = 1 Query: 58 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQE-TIKLAIRALLEVVES-GGKNIEVAVMT 687 A YDRAITVFSPDG LFQV YA EAV++G AVGV+ + +VL VEK+ T KL + S KI +D+HIA A +G+ ADARVL++RAR+E Q +RLT +PV + + + I L+Q +TQ GGVRPFG + L+ G + P LY+TDPSG + W+A A G N+ E +Y + E IKLAI AL + +E ++IEVA +T Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKEGVVLAVEKRITSKLIEPSSYEKIFQIDDHIAAAPSGIIADARVLVDRARLEAQVYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVN---DKPELYETDPSGAYFEWRAVAIGSGRNTAMAIFEDHYSDDLDMEGAIKLAILALAKTLEEPSPESIEVAYIT 216
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSMA_THEGJ (Proteasome subunit alpha OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=psmA PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.741e-45 Identity = 103/212 (48.58%), Postives = 138/212 (65.09%), Query Frame = 1 Query: 58 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQE-TIKLAIRALLEVVES-GGKNIEVAVMT 687 A YDRAITVFSPDG LFQV YA EAV++G AVGV+ +VL VEK+ T +L + S KI +D+HIA A +G+ ADARVL++RAR+E Q +RLT +PV + + + I L+Q +TQ GGVRPFG + L+ G + P LY+TDPSG + WKA A G N+ E++Y + E IKLAI AL + +E ++IEVA +T Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKGGVVLAVEKRITSRLIEPSSYEKIFQIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVNE---KPELYETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYSDDIDMEGAIKLAILALAKTLEEPSPESIEVAYIT 216
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSMA_METS3 (Proteasome subunit alpha OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=psmA PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.741e-45 Identity = 95/212 (44.81%), Postives = 140/212 (66.04%), Query Frame = 1 Query: 58 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSG-QETIKLAIRALLEVV--ESGGKNIEVAVM 684 A YDRAITVFSPDG LFQVEYA EAV++G ++G++ ++ IVL V+K++T L ++ S+ KI +D HI A +GL ADAR L+ RAR+E Q +++T +P+ V+ +++ + + Q YTQ+GGVRPFG S LI+G Y G+ L++TDPSG +KA A G ++ + E YK+ E I LA+ A+ E E+ N+E+AV+ Sbjct: 7 AGYDRAITVFSPDGRLFQVEYAREAVKRGTTSIGIKCSEGIVLAVDKRTTSNLVEATSIEKIFKIDEHIGAATSGLVADARALVERARVEAQINKITYSEPIRVDSLSKKLCDMLQMYTQNGGVRPFG-SALIIG-GVYDGICKLFETDPSGALIEYKATAIGSGRSAAMDIFEDQYKDDMNLNEAINLALTAINEATEHETTANNVEIAVI 216
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSMA_SULSO (Proteasome subunit alpha OS=Sulfolobus solfataricus GN=psmA PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.971e-45 Identity = 91/201 (45.27%), Postives = 136/201 (67.66%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE-TSGQETIKLAIRALLEVVESGGK 663 YDRAIT+FSPDG L+QV+YA EAV+KG A+G++ ++V+ EK+ L D S+ K+ +D+H+ + AGL +D RVLI+ AR HRL ++PV+++Y+T+ +A ++Q YTQ GGVRPFG++ +I G D VP L+ T+PSG + ++A A G+ + EFLEKNYKE + +ETI LA++AL ++ K Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSSVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGID--KSVPKLFMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLNVEETILLALKALSATLKPNEK 208
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSMA_METS5 (Proteasome subunit alpha OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=psmA PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 5.067e-45 Identity = 94/213 (44.13%), Postives = 141/213 (66.20%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE-TSGQETIKLAIRALLEVVESGGK----NIEVAVMT 687 YDRAIT+FSPDG L+QV+YA EAV+KG +GV+ + +V+ EKK +L D S+ K+ LD+H+ + AGL +D R+LI+ AR HRL ++P++++Y+T+ I+ ++Q YTQ GGVRPFG++ ++ G D GV L+ T+PSG F ++A A G+ + ++LEKNYKE S +ETI LA+ AL ++ G K N+E+ T Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTTLGVKTKNAVVILGEKKKASQLLDVDSIEKVFLLDDHVGCSFAGLASDGRILIDYARNSSLQHRLVYDEPISIDYLTKLISDVKQMYTQHGGVRPFGVALIVGGVD--RGVTKLFMTEPSGQFMPYQAVAIGQGGYNATDYLEKNYKEDLSVEETILLALNALKVTLKPGEKLGPGNVEIGFAT 220
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSMA_SULIY (Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=psmA PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 6.618e-45 Identity = 91/201 (45.27%), Postives = 135/201 (67.16%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE-TSGQETIKLAIRALLEVVESGGK 663 YDRAIT+FSPDG L+QV+YA EAV+KG A+G++ +V+ EK+ L D S+ K+ +D+H+ + AGL +D RVLI+ AR HRL ++PV+++Y+T+ +A ++Q YTQ GGVRPFG++ +I G D VP LY T+PSG + ++A A G+ + EFLEKNYKE + ++TI LA++AL ++ K Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGID--KSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKALSATLKPNEK 208
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSMA_SULIN (Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=psmA PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 6.618e-45 Identity = 91/201 (45.27%), Postives = 135/201 (67.16%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE-TSGQETIKLAIRALLEVVESGGK 663 YDRAIT+FSPDG L+QV+YA EAV+KG A+G++ +V+ EK+ L D S+ K+ +D+H+ + AGL +D RVLI+ AR HRL ++PV+++Y+T+ +A ++Q YTQ GGVRPFG++ +I G D VP LY T+PSG + ++A A G+ + EFLEKNYKE + ++TI LA++AL ++ K Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGID--KSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKALSATLKPNEK 208
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSMA_SULIM (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=psmA PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 6.618e-45 Identity = 91/201 (45.27%), Postives = 135/201 (67.16%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE-TSGQETIKLAIRALLEVVESGGK 663 YDRAIT+FSPDG L+QV+YA EAV+KG A+G++ +V+ EK+ L D S+ K+ +D+H+ + AGL +D RVLI+ AR HRL ++PV+++Y+T+ +A ++Q YTQ GGVRPFG++ +I G D VP LY T+PSG + ++A A G+ + EFLEKNYKE + ++TI LA++AL ++ K Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGID--KSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKALSATLKPNEK 208
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSMA_SULIL (Proteasome subunit alpha OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=psmA PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 6.618e-45 Identity = 91/201 (45.27%), Postives = 135/201 (67.16%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE-TSGQETIKLAIRALLEVVESGGK 663 YDRAIT+FSPDG L+QV+YA EAV+KG A+G++ +V+ EK+ L D S+ K+ +D+H+ + AGL +D RVLI+ AR HRL ++PV+++Y+T+ +A ++Q YTQ GGVRPFG++ +I G D VP LY T+PSG + ++A A G+ + EFLEKNYKE + ++TI LA++AL ++ K Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGID--KSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKALSATLKPNEK 208
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSMA_SULIK (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=psmA PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 6.618e-45 Identity = 91/201 (45.27%), Postives = 135/201 (67.16%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE-TSGQETIKLAIRALLEVVESGGK 663 YDRAIT+FSPDG L+QV+YA EAV+KG A+G++ +V+ EK+ L D S+ K+ +D+H+ + AGL +D RVLI+ AR HRL ++PV+++Y+T+ +A ++Q YTQ GGVRPFG++ +I G D VP LY T+PSG + ++A A G+ + EFLEKNYKE + ++TI LA++AL ++ K Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGID--KSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKALSATLKPNEK 208 The following BLAST results are available for this feature:
BLAST of FC931541 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 177
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931541 ID=FC931541; Name=FC931541; organism=Citrus clementina; type=EST; length=688bpback to top |