FC931541
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSMA_SULIA (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.27) GN=psmA PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 6.618e-45 Identity = 91/201 (45.27%), Postives = 135/201 (67.16%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE-TSGQETIKLAIRALLEVVESGGK 663 YDRAIT+FSPDG L+QV+YA EAV+KG A+G++ +V+ EK+ L D S+ K+ +D+H+ + AGL +D RVLI+ AR HRL ++PV+++Y+T+ +A ++Q YTQ GGVRPFG++ +I G D VP LY T+PSG + ++A A G+ + EFLEKNYKE + ++TI LA++AL ++ K Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGID--KSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKALSATLKPNEK 208
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSMA_METVS (Proteasome subunit alpha OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=psmA PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.129e-44 Identity = 98/209 (46.89%), Postives = 138/209 (66.03%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKET-SGQETIKLAIRALLEVVES-GGKNIEVAVM 684 YDRAIT+FSP+G L+QVEYA EAVR+G AVG++ D +VL V+++ T KL D S+ KI +D+HI A +GL ADARVLI+RAR+E Q +R++ + +TVE + + I ++Q YT GG RPFGL+ LI G D ++ L++TDPSG +KA A G E LE+ Y E S E ++LAI AL + E +NI++A++ Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARVEAQVNRISYGEAITVEALAKKICDIKQAYTHHGGARPFGLALLITGIDRHSA--RLFETDPSGALIEYKATAIGSGRPVAMEILEEKYDENMSVSEGMELAIYALSKTTEELKPENIDMAIV 216
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSMA_METMP (Proteasome subunit alpha OS=Methanococcus maripaludis GN=psmA PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.474e-44 Identity = 98/209 (46.89%), Postives = 138/209 (66.03%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKET-SGQETIKLAIRALLEVVES-GGKNIEVAVM 684 YDRAIT+FSP+G L+QVEYA EAVR+G AVG++ D +VL V+++ T KL D S+ KI +D+HI A +GL ADARVLI+RARIE Q +R++ + +TVE + + I ++Q YTQ GG RPFGL+ LI G D ++ L++TDPSG +KA A G E LE Y E + E ++LA+ AL + E +NI++A++ Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARIEAQMNRVSYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRHSA--RLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENMTVSEGMELALYALSKTTEELKPENIDMAII 216
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSMA_METM7 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=psmA PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.925e-44 Identity = 97/209 (46.41%), Postives = 138/209 (66.03%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKET-SGQETIKLAIRALLEVVES-GGKNIEVAVM 684 YDRAIT+FSP+G L+QVEYA EAVR+G AVG++ D +VL V+++ T KL D S+ KI +D+HI A +GL ADARVLI+RAR+E Q +R++ + +TVE + + I ++Q YTQ GG RPFGL+ LI G D ++ L++TDPSG +KA A G E LE Y E + E ++LA+ AL + E +NI++A++ Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRHSA--RLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENMTVNEGMELALYALSKTTEELKPENIDMAIV 216
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSMA_METM5 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=psmA PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.925e-44 Identity = 97/209 (46.41%), Postives = 138/209 (66.03%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE-TSGQETIKLAIRALLEVVES-GGKNIEVAVM 684 YDRAIT+FSP+G L+QVEYA EAVR+G AVG++ D +VL V+++ T KL D S+ KI +D+HI A +GL ADARVLI+RAR+E Q +R++ + +TVE + + I ++Q YTQ GG RPFGL+ LI G D ++ L++TDPSG +KA A G E LE Y E + E ++LA+ AL + E +NI++A++ Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRHSA--RLFETDPSGALIEYKATAIGSGRPIAMEVLESKYSEDMTVNEGMELALYALSKTTEELKPENIDMAIV 216
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSMA_METM6 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=psmA PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.515e-44 Identity = 97/209 (46.41%), Postives = 137/209 (65.55%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETS-GQETIKLAIRALLEVVES-GGKNIEVAVM 684 YDRAIT+FSP+G L+QVEYA EAVR+G AVG++ D +VL V+++ T KL D S+ KI +D+HI A +GL ADARVLI+RAR+E Q +R++ + +TVE + + I ++Q YTQ GG RPFGL+ LI G D ++ L++TDPSG +KA A G E LE Y E E ++LA+ AL + E +NI++A++ Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCNDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRHSA--RLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENMIVSEGMELALYALSKTTEELKPENIDMAIV 216
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSMA_METBF (Proteasome subunit alpha OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=psmA PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 3.284e-44 Identity = 94/211 (44.55%), Postives = 136/211 (64.45%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQE-TIKLAIRALLEVVES--GGKNIEVAVMT 687 YDRAITVFSPDG LFQVEYA EAV++G AVG++ D +VL V+K+ T +L ++ S+ KI +D+HI A +GL ADAR L++RAR+E Q +R++ ++P+ VE I++ I +Q YTQ GGVRP+G + LI G D +P L++TDPSG +KA A G N++ E E Y++ + I L + AL E +EV +++ Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVD--DNLPRLFETDPSGALLEYKATAIGAGRNAVVEVFEAEYRQDMNMDAAILLGMDALYRAAEGKFDASTLEVGIVS 217
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSMA_METAC (Proteasome subunit alpha OS=Methanosarcina acetivorans GN=psmA PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 3.284e-44 Identity = 96/211 (45.50%), Postives = 136/211 (64.45%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQE-TIKLAIRALLEVVES--GGKNIEVAVMT 687 YDRAITVFSPDG LFQVEYA EAV++G AVG++ D +VL V+K+ T +L ++ S+ KI +D HI A +GL ADAR L++RAR+E Q +R++ ++P+ VE I++ I +Q YTQ GGVRP+G + LI G D P L++TDPSG +KA A G N++ E E +Y+E + I L + AL + E +EV V++ Sbjct: 7 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDEHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVD--DNKPRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYREDMNMDAAILLGMDALYKAAEGKFDAGTLEVGVVS 215
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSMA_SULAC (Proteasome subunit alpha OS=Sulfolobus acidocaldarius GN=psmA PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 7.317e-44 Identity = 91/201 (45.27%), Postives = 131/201 (65.17%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSG-QETIKLAIRALLEVVESGGK 663 YDRAIT+FSPDG L+QV+YA EAV++G +GV+ +VL EK+ +L D + KI LD+H+ AGL +D R+LI+ AR + HRL ++P+++EY+T+ I+ ++Q YTQ GGVRPFG++ ++ G D P L T+PSG F + A A G+ + E+LEKNYKE Q TI LA+RAL+ ++ G K Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKRGWTTLGVKTKSGVVLLAEKRKATQLLDVDGIEKIFMLDDHVGCTFAGLASDGRILIDYARSQALQHRLIYDEPISIEYLTKVISDVKQAYTQHGGVRPFGVALIVGGIDK-GKQPKLLMTEPSGQFMPYYAVAIGQGGYTATEYLEKNYKEDLDIQSTILLALRALMATLKPGEK 209
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSMA_METTE (Proteasome subunit alpha OS=Methanosarcina thermophila GN=psmA PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.248e-43 Identity = 97/211 (45.97%), Postives = 136/211 (64.45%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQE-TIKLAIRALLEVVES--GGKNIEVAVMT 687 YDRAITVFSPDG LFQVEYA EAV++G AVG++ D +VL V+K+ T +L ++ S+ KI +D+HI A +GL ADAR L++RAR+E Q +R++ ++ + VE I++ I +Q YTQ GGVRP+G + LI G D P L++TDPSG +KA A G N++ E E +YKE E I L + AL + E +EV V++ Sbjct: 7 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGAATSGLVADARALVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDKR--PRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYKEDMNIEAAILLGMDALYKAAEGKFDAGTLEVGVVS 215 The following BLAST results are available for this feature:
BLAST of FC931541 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 177
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931541 ID=FC931541; Name=FC931541; organism=Citrus clementina; type=EST; length=688bpback to top |