FC931541
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA4_DICDI (Proteasome subunit alpha type-4 OS=Dictyostelium discoideum GN=psmA4 PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 8.371e-40 Identity = 88/208 (42.31%), Postives = 127/208 (61.06%), Query Frame = 1 Query: 61 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSV--RKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANAT-GRNSNSMREFLEKNYK-ETSGQETIKLAIRALLEVVESGGKNIE 672 RYD+ T+FSP+G ++QVEYA+ A+R A VG+ D IVL EKK+T KL DS + K+ +D H+ A AG+ +DA +LIN AR+ Q ++P+ VE + I +Q YTQ GG+RPFG+S L G+D + G LYQ+DPSG F+ WKA + G NS + L NYK + S +E ++LA++ L + ++ N E Sbjct: 4 RYDQRTTIFSPEGRVYQVEYAMTAIRHAGATVGILAKDGIVLAAEKKTTAKLLDSSTSISEKMFKIDEHVVCAVAGITSDANILINYARLSSQRFFYQYQEPMPVEQLVSQICDTKQGYTQYGGLRPFGVSFLYAGWDRHYGF-QLYQSDPSGNFAGWKATSIGGENSQVAQSVLRSNYKPDISLKEALQLALKVLTKTMDRSNINSE 210
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA4_PETHY (Proteasome subunit alpha type-4 OS=Petunia hybrida GN=PAC1 PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.093e-39 Identity = 81/200 (40.50%), Postives = 131/200 (65.50%), Query Frame = 1 Query: 61 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKL-QDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYK-ETSGQETIKLAIRALLEVVES 654 RYD T+FSP+G L+QVEYA+EA+ +A+G+ D +VL EKK T KL Q S S K+ +D+H+A A AG+ +DA +LIN AR++ Q + + ++P+ VE + + + +Q YTQ GG+ PFG+S L G+D G L+ +DPSG ++ WKA A G N+ + + L+++YK + + +E ++LA++ L + ++S Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGISSKDGVVLVGEKKVTSKLLQTSTSSEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFSYQEPMPVEQLVQSLCDTKQGYTQYGGLPPFGVSFLFAGWDKNFGF-QLFMSDPSGNYAGWKAAAIGANNQAAQSMLKQDYKDDITREEAVQLALKVLSKTMDS 202
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSMA_PICTO (Proteasome subunit alpha OS=Picrophilus torridus GN=psmA PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.865e-39 Identity = 92/208 (44.23%), Postives = 128/208 (61.54%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKET-SGQETIKLAIRALLEVV--ESGGKNIEVA 678 YDRAITVFSPDG LFQVEYA EAV+KG+ A+G++ D + L EKK +L + S+ KI +D+ +A +GL ADARVLI+ ARI Q ++T + +E + + +A Q+YTQ GGVRP+G+S + G D P L+ DP+GT + +K + G + + +LEK YKE S E I++ I AL V ES K E+A Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKKGSTALGIKFKDGVALISEKKVRSRLVEKTSLEKIQLIDDRVAAVTSGLVADARVLIDFARISDQQEKVTYGSLMNIENLVKRVADQMQQYTQYGGVRPYGVSIIFAGLDSIG--PRLFDCDPAGTINEYKCVSIGAGKDQVTAYLEKEYKENLSEDEAIRMGIAALKSAVADESSMKEPEIA 213
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSMA_METB6 (Proteasome subunit alpha OS=Methanoregula boonei (strain 6A8) GN=psmA PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.155e-39 Identity = 86/197 (43.65%), Postives = 126/197 (63.96%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATG-RNSNSMREFLEKNYKETSGQETIKLAIRALLEVVE 651 YDRAITVFSPDG L+QVEYA EAV++G AVG++ D +VL V+K+ + KL +S S+ KI +D HI +A +GL DAR L++RARIECQ +R++ ++ + VE + + + Q TQ GG+RP+G + LI G G L++TDPSGT +KA G +M+ F E+ + + ++ I L ++AL E Sbjct: 9 YDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIKAHDGVVLIVDKRVSSKLLESSSIEKIFKIDEHIGVASSGLVGDARALVDRARIECQINRVSYDERIEVEALAKKLCDHMQTLTQYGGIRPYGTALLIAGVS--DGESRLFETDPSGTLLEYKATGIGIGRPAAMKVFEEEYTADLALKDAILLGLKALHSATE 203
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSMA_AERPE (Proteasome subunit alpha OS=Aeropyrum pernix GN=psmA PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 7.087e-39 Identity = 82/209 (39.23%), Postives = 128/209 (61.24%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYK-ETSGQETIKLAIRALLEVVESGGKNIEVAVMT 687 YDRA T+FSP+G L+QV YA EAV+KG ++G++ + +V+ EK+ L D + KI +D+HI +A AG+ D R+LI+ AR+ HRL +P VE + + +A ++Q YTQ GGVRPFG++ + G +P G +Y+TDP G + ++KA A G E EK+Y+ + S +E KLA++ L ++ ++ E A+ T Sbjct: 12 YDRAATIFSPEGDLYQVRYAFEAVKKGWTSLGIKTNEGVVIAAEKRFIGPLVDIDDIDKIYKIDDHIGVAFAGMGGDGRILIDYARVFTVRHRLLYGEPPPVELVAKVVADVKQAYTQHGGVRPFGVALIFAGVNP-DGTTKVYRTDPGGQYFSFKAIAIGSGEQVANEMFEKHYRSDMSLEEATKLALKILYAIIRKTVEDKEKAIAT 219
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA2_XENLA (Proteasome subunit alpha type-2 OS=Xenopus laevis GN=psma2 PE=2 SV=2) HSP 1 Score: 160.614 bits (405), Expect = 7.087e-39 Identity = 89/209 (42.58%), Postives = 124/209 (59.33%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE-TSGQETIKLAIRALLEVVES--GGKNIEVAV 681 Y ++T FSP G L Q+EYAL AV G +VG++ T+ +VL EKK L D +S K+ + HI + +G+ D RVL+ RAR Q + L ++P+ + + +A + Q+YTQSGGVRPFG+S LI G+D G P L+Q+DPSG + AWKA A G+N + + FLEK Y E ++ I AI L E E NIEV + Sbjct: 6 YSFSLTTFSPSGKLVQIEYALAAVAAGAPSVGIKATNGVVLATEKKQKSILYDEQSAHKVEPITKHIGMVYSGMGPDYRVLVRRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWD--EGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAILTLKESFEGQMTEDNIEVGI 212
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA5_SCHPO (Probable proteasome subunit alpha type-5 OS=Schizosaccharomyces pombe GN=SPAC323.02c PE=1 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 9.256e-39 Identity = 85/219 (38.81%), Postives = 136/219 (62.10%), Query Frame = 1 Query: 58 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGG------VRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMR-EFLEKNYKETSGQETIKLAIRALLEVVES--GGKNIEVAVMT 687 + YDR + FSP+G LFQVEYA+EA++ G+ A+GV+ D +VLGVEK+ T L +S SV K+ +D+HI A +GL ADAR +I AR++ Q+HR T ++P +E T+ I L ++ + RPFG++ LI G D + P LY ++PSGT+ ++A A G S + E +++ +K+ + +E L ++ L +V+E KN+++A +T Sbjct: 6 SEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKDAVVLGVEKRLTSPLMESHSVEKLFEIDSHIGCAISGLTADARTIIEHARVQTQNHRFTYDEPQGIESTTQSICDLALRFGEGEDGEERIMSRPFGVALLIAGIDEHG--PQLYHSEPSGTYFRYEAKAIGSGSEPAKSELVKEFHKDMTLEEAEVLILKVLRQVMEEKLDSKNVQLAKVT 222
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA2_RAT (Proteasome subunit alpha type-2 OS=Rattus norvegicus GN=Psma2 PE=1 SV=3) HSP 1 Score: 160.229 bits (404), Expect = 9.256e-39 Identity = 90/209 (43.06%), Postives = 125/209 (59.81%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE-TSGQETIKLAIRALLEVVES--GGKNIEVAV 681 Y ++T FSP G L Q+EYAL AV G +VG++ + +VL EKK L D RSV K+ + HI L +G+ D RVL++RAR Q + L ++P+ + + +A + Q+YTQSGGVRPFG+S LI G++ G P L+Q+DPSG + AWKA A G+N + + FLEK Y E ++ I AI L E E NIEV + Sbjct: 6 YSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWN--EGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAILTLKESFEGQMTEDNIEVGI 212
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA2_MOUSE (Proteasome subunit alpha type-2 OS=Mus musculus GN=Psma2 PE=1 SV=2) HSP 1 Score: 160.229 bits (404), Expect = 9.256e-39 Identity = 90/209 (43.06%), Postives = 125/209 (59.81%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE-TSGQETIKLAIRALLEVVES--GGKNIEVAV 681 Y ++T FSP G L Q+EYAL AV G +VG++ + +VL EKK L D RSV K+ + HI L +G+ D RVL++RAR Q + L ++P+ + + +A + Q+YTQSGGVRPFG+S LI G++ G P L+Q+DPSG + AWKA A G+N + + FLEK Y E ++ I AI L E E NIEV + Sbjct: 6 YSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWN--EGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAILTLKESFEGQMTEDNIEVGI 212
BLAST of FC931541 vs. ExPASy Swiss-Prot
Match: PSA2_HUMAN (Proteasome subunit alpha type-2 OS=Homo sapiens GN=PSMA2 PE=1 SV=2) HSP 1 Score: 160.229 bits (404), Expect = 9.256e-39 Identity = 90/209 (43.06%), Postives = 125/209 (59.81%), Query Frame = 1 Query: 64 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE-TSGQETIKLAIRALLEVVES--GGKNIEVAV 681 Y ++T FSP G L Q+EYAL AV G +VG++ + +VL EKK L D RSV K+ + HI L +G+ D RVL++RAR Q + L ++P+ + + +A + Q+YTQSGGVRPFG+S LI G++ G P L+Q+DPSG + AWKA A G+N + + FLEK Y E ++ I AI L E E NIEV + Sbjct: 6 YSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWN--EGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAILTLKESFEGQMTEDNIEVGI 212 The following BLAST results are available for this feature:
BLAST of FC931541 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 177
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931541 ID=FC931541; Name=FC931541; organism=Citrus clementina; type=EST; length=688bpback to top |