FC931546
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931546 vs. ExPASy Swiss-Prot
Match: SMG1_DROME (Serine/threonine-protein kinase Smg1 OS=Drosophila melanogaster GN=Smg1 PE=1 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 2.126e-33 Identity = 66/151 (43.71%), Postives = 104/151 (68.87%), Query Frame = 3 Query: 21 PLIAKVEVFEYALQNTEGNDLARVLWLKSRTSEIWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDFGDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEGNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLINW 473 P+ ++V + Q T + LAR LW ++ + W + + R ++VMSM+GY++GLGDRH N++++ SG I+HID+ CFE + PEKVPFRLT+ LV+AM ++GIEG FR CE V++V+R R++++ ++EAFV+DPL++W Sbjct: 2045 PISVLLQVLDELSQETPNDLLARELWCQAGNAAEWRQSVRRFVRCMSVMSMIGYVIGLGDRHLDNVLINLGSGDIVHIDYNVCFEKGRTL-RIPEKVPFRLTQNLVQAMGITGIEGPFRLGCEYVLKVMRKERETLLTLLEAFVYDPLVDW 2194
BLAST of FC931546 vs. ExPASy Swiss-Prot
Match: SMG1_MOUSE (Serine/threonine-protein kinase SMG1 OS=Mus musculus GN=Smg1 PE=1 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 8.079e-33 Identity = 65/151 (43.05%), Postives = 101/151 (66.89%), Query Frame = 3 Query: 21 PLIAKVEVFEYALQNTEGNDLARVLWLKSRTSEIWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDFGDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEGNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLINW 473 PL V E ++ T N LA+ LW T + W +Y RS AVMSMVGY++GLGDRH N+++ +G+++HID+ CFE + + PEKVPFR+T+ + A+ V+G+EG FR +CE V+ ++R R++++ ++EAFV+DPL++W Sbjct: 2274 PLHVMKAVLEELMEATPPNLLAKELWSSCTTPDEWWRVTQSYARSTAVMSMVGYIIGLGDRHLDNVLIDMTTGEVVHIDYNVCFEKGKSL-RVPEKVPFRMTQNIETALGVTGVEGVFRLSCEQVLHIMRRGRETLLTLLEAFVYDPLVDW 2423
BLAST of FC931546 vs. ExPASy Swiss-Prot
Match: SMG1_HUMAN (Serine/threonine-protein kinase SMG1 OS=Homo sapiens GN=SMG1 PE=1 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 8.079e-33 Identity = 65/151 (43.05%), Postives = 101/151 (66.89%), Query Frame = 3 Query: 21 PLIAKVEVFEYALQNTEGNDLARVLWLKSRTSEIWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDFGDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEGNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLINW 473 PL V E ++ T N LA+ LW T + W +Y RS AVMSMVGY++GLGDRH N+++ +G+++HID+ CFE + + PEKVPFR+T+ + A+ V+G+EG FR +CE V+ ++R R++++ ++EAFV+DPL++W Sbjct: 2272 PLHVMKAVLEELMEATPPNLLAKELWSSCTTPDEWWRVTQSYARSTAVMSMVGYIIGLGDRHLDNVLIDMTTGEVVHIDYNVCFEKGKSL-RVPEKVPFRMTQNIETALGVTGVEGVFRLSCEQVLHIMRRGRETLLTLLEAFVYDPLVDW 2421
BLAST of FC931546 vs. ExPASy Swiss-Prot
Match: RAD3_SCHPO (Protein kinase rad3 OS=Schizosaccharomyces pombe GN=rad3 PE=1 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 5.789e-31 Identity = 70/173 (40.46%), Postives = 103/173 (59.54%), Query Frame = 3 Query: 123 WLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDFGDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEGNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLINWRLFNFNEVPQMSVFANTHVPPVVNA-----EETAPNRELPQPQRGARERELLQAVN 626 W+ R NY R+LAVMS+VGY+LGLGDRH N++ ++G+ +H+DF F+ + EK PEKVPFRLT +V AM +G EG FR E M++LRSN+D++M+++E+F+HDPL+ W N S + N V++ + P +P G + + AVN Sbjct: 2205 WVTSRQNYCRTLAVMSIVGYVLGLGDRHGENILFDEFTGEAIHVDFNCLFDKGLTFEK-PEKVPFRLTHNMVDAMGPTGYEGGFRKASEITMRLLRSNQDTLMSVLESFLHDPLVEW-----NRKKSSSKYPNNEANEVLDIIRKKFQGFMPGETIPLSIEGQIQELIKSAVN 2371
BLAST of FC931546 vs. ExPASy Swiss-Prot
Match: SMG1_DICDI (Probable serine/threonine-protein kinase smg1 OS=Dictyostelium discoideum GN=smg1 PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.092e-29 Identity = 60/150 (40.00%), Postives = 98/150 (65.33%), Query Frame = 3 Query: 36 VEVFEYALQNTEGNDLARVLWLKSRTSEIWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDFGDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEGNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLINWRLFN 485 ++V +Q T L R LW S +S + +Y+RSLA+MS++GY++GLGDRH N++L +G+I+HID+ CFE K PE+VPFR+T++ A+ ++G++G FR T +M +LR N+D ++ ++E F++DPL +W+ N Sbjct: 2008 IQVLNELMQETPKWILQRELWFSSSSSSELFLKTQSYSRSLALMSVIGYMIGLGDRHLDNILLDLKTGEIVHIDYNICFEKGAEL-KIPERVPFRMTQIFEYALGLTGVQGTFRETSIQIMHLLRKNKDILLNLLETFIYDPLFDWKHSN 2156
BLAST of FC931546 vs. ExPASy Swiss-Prot
Match: ATM_ARATH (Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana GN=ATM PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.577e-28 Identity = 54/119 (45.38%), Postives = 84/119 (70.59%), Query Frame = 3 Query: 123 WLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDFGDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEGNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLINWRL 479 W +R YTRS+A SMVGY++GLGDRH N+++ + + +++HID G FE + K PE+VPFRLTR ++ M ++G+EG FR CE + V+R+N+++++ ++E F+HDPL W L Sbjct: 3656 WFVKRLAYTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLGVAFEQGLML-KTPERVPFRLTRDIIDGMGITGVEGVFRRCCEETLSVMRTNKEALLTIVEVFIHDPLYKWAL 3773
BLAST of FC931546 vs. ExPASy Swiss-Prot
Match: ATM_HUMAN (Serine-protein kinase ATM OS=Homo sapiens GN=ATM PE=1 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 3.512e-28 Identity = 66/180 (36.67%), Postives = 106/180 (58.89%), Query Frame = 3 Query: 120 IWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDFGDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEGNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLINWRLFNFNEV-PQMSVFANTHVPPVVNAEETAPNR---ELPQPQRGARERELLQAVNQLGDASE 647 IW E+R YTRS+A S+VGY+LGLGDRH N++++ S +++HID G FE PE VPFRLTR +V M ++G+EG FR CE M+V+R+++++++ ++E ++DPL +W + + Q T + P +NA++ R ++ Q ER L++ +L E Sbjct: 2844 IWFEKRLAYTRSVATSSIVGYILGLGDRHVQNILINEQSAELVHIDLGVAFEQGKILPT-PETVPFRLTRDIVDGMGITGVEGVFRRCCEKTMEVMRNSQETLLTIVEVLLYDPLFDWTMNPLKALYLQQRPEDETELHPTLNADDQECKRNLSDIDQSFNKVAERVLMRLQEKLKGVEE 3022
BLAST of FC931546 vs. ExPASy Swiss-Prot
Match: SMG1_CAEEL (Serine/threonine-protein kinase smg-1 OS=Caenorhabditis elegans GN=smg-1 PE=1 SV=3) HSP 1 Score: 124.02 bits (310), Expect = 7.825e-28 Identity = 62/145 (42.76%), Postives = 90/145 (62.07%), Query Frame = 3 Query: 39 EVFEYALQNTEGNDLARVLWLKSRTSEIWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDFGDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEGNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLINW 473 EVFE T + ++R LW+++ + W Y+RSLAVMSMVG +LGLGDRH NL++ G ++HID+ CF+ N + PE VPFRLTR + A+ S + G FR +C +V+ LRS + +++AFV DPL++W Sbjct: 1913 EVFESLTAKTPTDLISRELWMRANDATTWWSVTKRYSRSLAVMSMVGSVLGLGDRHLDNLLVDLKWGHVVHIDYNICFDKGKNL-RIPETVPFRLTRNMRHALGPSEMYGTFRESCVHVLSTLRSGHQVLTMLLDAFVFDPLVDW 2056
BLAST of FC931546 vs. ExPASy Swiss-Prot
Match: ATM_MOUSE (Serine-protein kinase ATM OS=Mus musculus GN=Atm PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.072e-27 Identity = 66/196 (33.67%), Postives = 109/196 (55.61%), Query Frame = 3 Query: 120 IWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDFGDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEGNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLINWRLFNFNEVPQMSVFANTHVPPVVNAEETAPNRELPQPQRGARERELLQAVNQLGDASEVLNGRAVVVMARMSNKLQDV 707 +W E+R YTRS+A S+VGY+LGLGDRH N++++ S +++HID G FE PE VPFRL+R +V M ++G+EG FR CE M+V+RS++++++ ++E ++DPL +W + N + + + +++ A ++E Q L D + N A V+ R+ KL+ V Sbjct: 2854 VWFEKRLAYTRSVATSSIVGYILGLGDRHVQNILINEQSAELVHIDLGVAFEQGKILPT-PETVPFRLSRDIVDGMGITGVEGVFRRCCEKTMEVMRSSQETLLTIVEVLLYDPLFDWTM---NPLKALYLQQRPEDESDLHSTPNADDQECKQ---------------SLSDTDQSFNKVAERVLMRLQEKLKGV 3030
BLAST of FC931546 vs. ExPASy Swiss-Prot
Match: ATM_PIG (Serine-protein kinase ATM OS=Sus scrofa GN=ATM PE=3 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 6.624e-27 Identity = 53/120 (44.17%), Postives = 84/120 (70.00%), Query Frame = 3 Query: 120 IWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYSGKILHIDFGDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEGNFRSTCENVMQVLRSNRDSVMAMMEAFVHDPLINWRL 479 +W ERR YT+S+A S+VGY+LGLGDRH N++++ S +++HID G FE PE VPFRLTR +V M ++G+EG FR CE M+V+R+++++++ ++E ++DPL +W + Sbjct: 2845 VWFERRLAYTQSVATSSIVGYILGLGDRHVQNILINEQSAELVHIDLGVAFEQGKILPT-PETVPFRLTRDIVDGMGITGVEGVFRRCCEKTMEVMRNSQETLLTIVEVLLYDPLFDWTM 2963 The following BLAST results are available for this feature:
BLAST of FC931546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931546 ID=FC931546; Name=FC931546; organism=Citrus clementina; type=EST; length=716bpback to top |