FC931548

Overview
NameFC931548
Unique NameFC931548
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.210e-14
Identity = 50/146 (34.25%), Postives = 72/146 (49.32%), Query Frame = 1
Query:  187 YASNKKKRGP-PEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYDFWDRT 621
            Y   K KR   P      PVIG+L  L +    R     A KYGPI + R+G    +V+S+ E+AKE L T D  FA RP     E + +       + Y P++R+IRK+    L S  R+   KHVRE E +  + ++    D++
Sbjct:   20 YQKPKTKRYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKS 165          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71BF_ARATH (Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=CYP71B15 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.770e-14
Identity = 44/128 (34.38%), Postives = 72/128 (56.25%), Query Frame = 1
Query:  238 PVIGHLHLLGRFPLH-RVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYDFWDR 618
            P+IG+LH   R  LH R   ++A+ YGP+  ++ G    + +S+ E A+E L  +D    SRP+A       +NF   G +P+G  W  +RK++ +EL S  +L+  K++ E E   C+K+L +F  R
Sbjct:   36 PIIGNLHQ--RRTLHPRNRRNLAEMYGPVALLQYGFVPVVAISSKEAAEEVLKINDLECCSRPEAAGMRATFYNFKDIGMAPFGDEWSLMRKLSVVELFSVKKLQSFKYIIEEENNLCVKKLSEFATR 161          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71BG_ARATH (Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=CYP71B16 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.399e-14
Identity = 41/128 (32.03%), Postives = 67/128 (52.34%), Query Frame = 1
Query:  217 PEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            P +   +PVIG+LH +G  P HR    +A++ G +  +  G     V+S+ E A+E L THD    +RPK + + ++   F    F+PYG  WR+ RK    EL    +++   ++ E E    +K+L
Sbjct:   31 PPSPPTFPVIGNLHQVGELP-HRSFQRLAERTGHVMLLHFGFVPVTVISSREAAEEVLRTHDLKCCTRPKLVGSRLISRGFKDISFTPYGEEWRERRKFLVRELFCFKKVQYFGYIVEEECNLLVKKL 157          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: TCMO_SOYBN (Trans-cinnamate 4-monooxygenase OS=Glycine max GN=CYP73A11 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.433e-13
Identity = 42/121 (34.71%), Postives = 68/121 (56.20%), Query Frame = 1
Query:  238 PVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            P+ G+   +G    HR L D+A K+G IF +RMG    +VVS+ E+AKE L T    F SR + +V +I         F+ YG HWR++R+I T+   +N  +++ +H  E E    ++++
Sbjct:   41 PIFGNWLQVGDDLNHRNLTDLAKKFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRHGWESEAAAVVEDV 161          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71BH_ARATH (Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=CYP71B17 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.433e-13
Identity = 39/121 (32.23%), Postives = 66/121 (54.55%), Query Frame = 1
Query:  238 PVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            PVIG+LH +G  P HR    +A++ G +  + +G     V+S+ E A+E L THD    SRP  + + ++   F    F+PYG  W++ R+    EL  + +L+   +++E E    +K+L
Sbjct:   38 PVIGNLHQVGELP-HRSFRRLAERTGHVMLLHLGFVPVTVISSREAAEEVLRTHDLDCCSRPNLVGSRLISRGFKDLNFTPYGEEWKERRRFLVGELFCSKKLQSFIYIKEVECNFLVKKL 157          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.192e-13
Identity = 44/124 (35.48%), Postives = 71/124 (57.26%), Query Frame = 1
Query:  238 PVIGHLHLLG--RFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELY 603
            P++G+L+ +   RF   R   + A  YGPI ++ +G    +VVS+ E+AKE L  HD+  A R +    E    N     ++ YGPH+ ++RK+ TLEL +  RLE L+ +RE EV   ++ ++
Sbjct:   35 PIVGNLYDIKPVRF---RCYYEWAQSYGPIISVWIGSILNVVVSSAELAKEVLKEHDQKLADRHRNRSTEAFSRNGQDLIWADYGPHYVKVRKVCTLELFTPKRLESLRPIREDEVTAMVESVF 155          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71BO_ARATH (Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=CYP71B24 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.444e-13
Identity = 41/121 (33.88%), Postives = 69/121 (57.02%), Query Frame = 1
Query:  238 PVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            PVIG+L+ L R   H+ L D++ K+GP+  +R+G    +V+S+ E A+E L  HD    +RP   V   L  +    G +PYG   R++RK++ L+  S  ++   +++RE E    +K+L
Sbjct:   34 PVIGNLYQL-RGLFHKCLHDLSKKHGPVLLLRLGFLDMVVISSTEAAEEALKVHDLECCTRPITNVTSKLWRDGQDIGLAPYGESLRELRKLSFLKFFSTTKVRSFRYIREEENDLMVKKL 153          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C80B2_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Eschscholzia californica GN=CYP80B2 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.286e-13
Identity = 43/138 (31.16%), Postives = 68/138 (49.28%), Query Frame = 1
Query:  187 YASNKKKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            + S+  K  PP     WP++G+L  LG  P H    ++A  YG IFT++MG    +V S    A E L THDR+ ++R       + G   +   +S     W+ +RK+   EL +   +E   HVRE + +  ++ L
Sbjct:   21 FGSSGHKNLPP-GPKPWPIVGNLLQLGEKP-HAQFAELAQTYGDIFTLKMGTETVVVASTSSAASEILKTHDRILSARYVFQSFRVKGHVENSIVWSDCTETWKNLRKVCRTELFTQKMIESQAHVREKKCEEMVEYL 156          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: TCMO_CATRO (Trans-cinnamate 4-monooxygenase OS=Catharanthus roseus GN=CYP73A4 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.584e-12
Identity = 42/121 (34.71%), Postives = 67/121 (55.37%), Query Frame = 1
Query:  238 PVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            PV G+   +G    HR L D A K+G IF +RMG    +VVS+ E+AKE L T    F SR + +V +I         F+ YG HWR++R+I T+   +N  +++ ++  E E    ++++
Sbjct:   41 PVFGNWLQVGDDLNHRNLSDYAKKFGEIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAARVVEDV 161          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.584e-12
Identity = 40/128 (31.25%), Postives = 63/128 (49.22%), Query Frame = 1
Query:  217 PEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            P     WP++G+L  LG  P H    ++A  YG IFT++MG    +V S    A E L THDR+ ++R       + G   +   +S     W+ +RK+   EL +   +E   HVRE + +  ++ L
Sbjct:   29 PPGPKPWPIVGNLLQLGEKP-HAQFAELAQTYGDIFTLKMGTETVVVASTSSAASEILKTHDRILSARYVFQSFRVKGHVENSIVWSDCTETWKNLRKVCRTELFTQKMIESQAHVREKKCEEMVEYL 155          
The following BLAST results are available for this feature:
BLAST of FC931548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 123
Match NameE-valueIdentityDescription
C83A1_ARATH2.210e-1434.25Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]
C71BF_ARATH3.770e-1434.38Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=C... [more]
C71BG_ARATH8.399e-1432.03Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=C... [more]
TCMO_SOYBN1.433e-1334.71Trans-cinnamate 4-monooxygenase OS=Glycine max GN=... [more]
C71BH_ARATH1.433e-1332.23Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=C... [more]
C98A3_ARATH3.192e-1335.48Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
C71BO_ARATH5.444e-1333.88Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=C... [more]
C80B2_ESCCA9.286e-1331.16(S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS... [more]
TCMO_CATRO1.584e-1234.71Trans-cinnamate 4-monooxygenase OS=Catharanthus ro... [more]
C80B1_ESCCA1.584e-1231.25(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]

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Properties
Property NameValue
Genbank descriptionC34106D01EF PostHarvP1 Citrus clementina cDNA clone C34106D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931548 ID=FC931548; Name=FC931548; organism=Citrus clementina; type=EST; length=714bp
GACGGTACTGATATTTATCTCCTCTATTTGCCTTGAATCTGCATGCATAT
TATATTAAGCTCAACCACTCAGGCTTAGAAGGAAGCAGCGGCGATGGCCT
TTTTTGCATCCCAAACAAGTGCTGTAGCTGCGATTTTAACCCTTATAATC
TTTCTATACACTTTGTTGTTGTTTGTTTCAAGAAATTACGCAAGCAATAA
GAAGAAGAGAGGACCTCCAGAAGCTGGTGGAGCATGGCCTGTGATTGGGC
ATCTACACCTCTTGGGAAGGTTCCCCCTTCACAGAGTGTTGGGAGACATG
GCTGACAAGTACGGACCAATCTTCACAATCAGGATGGGCGTACATCGGGC
TTTGGTGGTGAGCAATTGGGAGATGGCTAAAGAGTGTCTCACTACACATG
ACAGAGTCTTTGCCAGCCGTCCAAAAGCTCTTGTCGCAGAGATATTAGGC
TTCAACTTTTCCATGTTTGGTTTCAGCCCATATGGTCCCCATTGGCGCCA
GATACGCAAGATAGCCACACTTGAGCTTCTCTCAAACCATCGGCTTGAGA
AGCTCAAGCATGTTCGAGAAGGCGAGGTGAAGACTTGTTTGAAGGAGTTA
TATGACTTTTGGGATCGTACGAACAATTACNAAAGTTCGGATCATAATAA
ACACAGAAGGTATTGGTGGAGATGACAAATGGTTTGAGGATGTAACCCTT
ATGCGATCTTAGGG
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