FC931548

Overview
NameFC931548
Unique NameFC931548
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15350 contig Ccv1_Contig15350:1..716. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71BD_ARATH (Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=CYP71B13 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.816e-15
Identity = 41/129 (31.78%), Postives = 71/129 (55.04%), Query Frame = 1
Query:  193 SNKKKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEV 579
            + K K+  P      P+IG+LH LG  P HR +  +++KYGP+  +++G   ++V S  E  K+ L T D+   SR        + +N     F+PY  +W+ +RK+  +EL +  R++  +++RE EV
Sbjct:   22 TRKTKKNLPPGPPRLPIIGNLHQLGSKP-HRSMFKLSEKYGPLVYLKLGKVPSVVASTPETVKDVLKTFDKDCCSRAFLTYPARISYNLKDLAFAPYSKYWKAVRKMTVVELYTAKRVKSFRNIREEEV 149          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71AJ_ARATH (Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=CYP71A19 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.596e-15
Identity = 42/121 (34.71%), Postives = 70/121 (57.85%), Query Frame = 1
Query:  238 PVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            PVIG+LH L     HR L  ++ +YGP+  +  G    L+VS+ ++A + L T+D + A+RPK  V + +        F+PYG +W+Q++ I    LLSN  +   K +RE E+K  ++++
Sbjct:   41 PVIGNLHQLS-LNTHRSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDILKTYDVICANRPKTKVIDKILRGGRDVAFAPYGEYWKQMKSICIQNLLSNKMVRSYKKIREDEIKLMIEKV 160          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C77A2_SOLME (Cytochrome P450 77A2 OS=Solanum melongena GN=CYP77A2 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.921e-15
Identity = 47/141 (33.33%), Postives = 80/141 (56.74%), Query Frame = 1
Query:  190 ASNKKKRGPPEAGGAWPVIGHLHLLGRF--PLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMF--GFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            A +KK + PP   G WPV+G+L  + R   P  +++ ++  KYGPIFT+RMG    +++SN ++  E L    +VFA+RP+      + F+   F    + YGP WR +RK      LS+ RL++ + VR+  +   ++++
Sbjct:   35 AESKKLKLPPGPPG-WPVVGNLLQVARSGKPFFQIMRELRQKYGPIFTLRMGTRTMIILSNADLVHEALILKGQVFATRPRENPTRTV-FSCDKFTVNAAVYGPVWRSLRKNMVQNGLSSIRLKEFRAVRKSAMDKMIEKI 173          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71B8_ARATH (Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CYP71B8 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.921e-15
Identity = 45/129 (34.88%), Postives = 73/129 (56.59%), Query Frame = 1
Query:  214 PPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            PP   G  P+IG+LH LGR  LH     ++ ++GP+  +R GV   +V+S+ E AK+ L + D    SRPK +   +   NF    F+ YG  WR+++K+  LEL +  + +  +++RE E    +K+L
Sbjct:   31 PPGPTGL-PIIGNLHQLGRL-LHSSFHKLSLEHGPVMLLRFGVVPMVVISSKEAAKQVLKSRDLETCSRPKLVANGLFTRNFKDIAFAQYGEDWREMKKLVGLELFNPKKHKFFRYIREEEGDLLVKKL 157          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.296e-14
Identity = 44/130 (33.85%), Postives = 72/130 (55.38%), Query Frame = 1
Query:  217 PEAGGAWPVIGHLHLLGRFPLH-RVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELY 603
            P     WPV+G+L  +   P+  R   + A++YGP+ ++  G    +VVS  E+AKE L  +D+  A RP+    +    N     ++ YGPH+ ++RK+  LEL +  RLE L+ +RE EV   ++ +Y
Sbjct:   32 PPGPRPWPVLGNLRQIK--PIRCRCFQEWAERYGPVISVWFGSGLTVVVSTSELAKEVLKENDQQLADRPRNRSTQRFSRNGQDLIWADYGPHYIKVRKLCNLELFTPKRLEALRPIREDEVTAMVESVY 159          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71B3_ARATH (Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CYP71B3 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.296e-14
Identity = 44/140 (31.43%), Postives = 75/140 (53.57%), Query Frame = 1
Query:  205 KRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYDFWDRTN 624
            KR  P +    P+IG+LH L R   HR L D++ K+GP+  +R+G    +V+S+ E A+E L  HD    +RPK   +     +     F+PYG   R++RK++ +   S  ++   +++RE E    +K+L +   + N
Sbjct:   26 KRNLPPSPPKLPIIGNLHQL-RGLFHRCLHDLSKKHGPVLLLRLGFIDMVVISSKEAAEEVLKVHDLECCTRPKTNASSKFSRDGKDIAFAPYGEVSRELRKLSLINFFSTQKVRSFRYIREEENDLMVKKLKESAKKKN 164          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71AF_ARATH (Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=CYP71A15 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.296e-14
Identity = 43/121 (35.54%), Postives = 68/121 (56.20%), Query Frame = 1
Query:  238 PVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            PVIG+LH L   P HR L  ++ +YGP+  +  G    LVVS+ ++A + + THD   A+RP+  V E +        FSPYG +WRQI+ +  + LL+   ++    VRE E    ++++
Sbjct:   40 PVIGNLHQLSLHP-HRSLRSLSHRYGPLMLLHFGRVPILVVSSSDVAHDLMKTHDLKVANRPRLKVIETILNGGREVVFSPYGDYWRQIKTVCVVHLLNKKMVQSFAKVREEERSVMMEKV 159          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C76C1_ARATH (Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.692e-14
Identity = 43/137 (31.39%), Postives = 78/137 (56.93%), Query Frame = 1
Query:  211 GPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASR-PKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYDFWDR 618
            GPP      P+IG++HL+G+ P HR   +++  YGP+ ++++G    +V+++ E A+E L THD++ ++R P   V  I   + S+         WR +R+++  +LLS  R+E  K +R  +VK  +  + +  DR
Sbjct:   41 GPPRL----PIIGNIHLVGKHP-HRSFAELSKTYGPVMSLKLGSLNTVVIASPEAAREVLRTHDQILSARSPTNAVRSINHQDASLVWLPSSSARWRLLRRLSVTQLLSPQRIEATKALRMNKVKELVSFISESSDR 172          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C71AR_ARATH (Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=CYP71A27 PE=2 SV=3)

HSP 1 Score: 79.7221 bits (195), Expect = 1.692e-14
Identity = 42/121 (34.71%), Postives = 67/121 (55.37%), Query Frame = 1
Query:  238 PVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            PVIG+LH LG  P HR L  ++ +YGP+  +  G    LVVS  ++  + + THD  FA+RPK+    I         F PYG  W+ ++ +  + LL+N  +   +++RE E+K   ++L
Sbjct:   41 PVIGNLHQLGPNP-HRYLHSLSLRYGPLMLLHFGRVPVLVVSCPDVTNDIMKTHDLKFANRPKSKAINIFMEGGRDIIFGPYGEDWKSMKSLGVVHLLNNKMVRSFENLREEEIKVMTEKL 160          
BLAST of FC931548 vs. ExPASy Swiss-Prot
Match: C93A2_SOYBN (Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.210e-14
Identity = 49/138 (35.51%), Postives = 74/138 (53.62%), Query Frame = 1
Query:  187 YASNKKKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKEL 600
            +   +KK+ PP   G  P+IGHLHL+   P H+    ++ ++GPI  + +G    +V S  E AKE L TH+  F++RP   VA      F  + F PYGP  + I+K+   ELL    L++   VR+ E K  +K +
Sbjct:   21 WRKERKKKLPPSPKGL-PIIGHLHLVSPIP-HQDFYKLSLRHGPIMQLFLGSVPCVVASTAEAAKEFLKTHEINFSNRPGQNVA----VQFLTYVFGPYGPSVKFIKKLCMSELLGGRMLDQFLPVRQQETKKFIKRV 152          
The following BLAST results are available for this feature:
BLAST of FC931548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 123
Match NameE-valueIdentityDescription
C71BD_ARATH5.816e-1531.78Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=C... [more]
C71AJ_ARATH7.596e-1534.71Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=C... [more]
C77A2_SOLME9.921e-1533.33Cytochrome P450 77A2 OS=Solanum melongena GN=CYP77... [more]
C71B8_ARATH9.921e-1534.88Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CY... [more]
C98A1_SORBI1.296e-1433.85Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C71B3_ARATH1.296e-1431.43Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CY... [more]
C71AF_ARATH1.296e-1435.54Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=C... [more]
C76C1_ARATH1.692e-1431.39Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CY... [more]
C71AR_ARATH1.692e-1434.71Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=C... [more]
C93A2_SOYBN2.210e-1435.51Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC34106D01EF PostHarvP1 Citrus clementina cDNA clone C34106D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931548 ID=FC931548; Name=FC931548; organism=Citrus clementina; type=EST; length=714bp
GACGGTACTGATATTTATCTCCTCTATTTGCCTTGAATCTGCATGCATAT
TATATTAAGCTCAACCACTCAGGCTTAGAAGGAAGCAGCGGCGATGGCCT
TTTTTGCATCCCAAACAAGTGCTGTAGCTGCGATTTTAACCCTTATAATC
TTTCTATACACTTTGTTGTTGTTTGTTTCAAGAAATTACGCAAGCAATAA
GAAGAAGAGAGGACCTCCAGAAGCTGGTGGAGCATGGCCTGTGATTGGGC
ATCTACACCTCTTGGGAAGGTTCCCCCTTCACAGAGTGTTGGGAGACATG
GCTGACAAGTACGGACCAATCTTCACAATCAGGATGGGCGTACATCGGGC
TTTGGTGGTGAGCAATTGGGAGATGGCTAAAGAGTGTCTCACTACACATG
ACAGAGTCTTTGCCAGCCGTCCAAAAGCTCTTGTCGCAGAGATATTAGGC
TTCAACTTTTCCATGTTTGGTTTCAGCCCATATGGTCCCCATTGGCGCCA
GATACGCAAGATAGCCACACTTGAGCTTCTCTCAAACCATCGGCTTGAGA
AGCTCAAGCATGTTCGAGAAGGCGAGGTGAAGACTTGTTTGAAGGAGTTA
TATGACTTTTGGGATCGTACGAACAATTACNAAAGTTCGGATCATAATAA
ACACAGAAGGTATTGGTGGAGATGACAAATGGTTTGAGGATGTAACCCTT
ATGCGATCTTAGGG
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