FC931551

Overview
NameFC931551
Unique NameFC931551
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length647
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15351 contig Ccv1_Contig15351:1..647. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_NEUCR (Phosphoenolpyruvate carboxykinase [ATP] OS=Neurospora crassa GN=pck-1 PE=3 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 4.190e-75
Identity = 142/216 (65.74%), Postives = 163/216 (75.46%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMP-KRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D ++RI+VR+V ARAYH+LFM NM IRP  EELE F  PD+TIYNAG FP NRYT  M+SSTS+ IN A KEMVILGT+YAGEMKKG+F++M Y  P K  IL+LHS  N GKDGDV                D NR LIGDDEHCWSD GV NIEGGCYAK I LS EKEPDI+NAI++G+VLEN+VF+  TREVDY D ++TENTR AYPIEYI
Sbjct:  143 DEKYRIRVRVVCARAYHALFMRNMLIRPPREELEHFH-PDYTIYNAGSFPANRYTEGMSSSTSVAINFAEKEMVILGTEYAGEMKKGIFTVMFYEGPVKHNILTLHSSANEGKDGDVTLFFGLSGTGKTTLSADPNRRLIGDDEHCWSDRGVFNIEGGCYAKTIGLSAEKEPDIFNAIRYGSVLENVVFNPETREVDYGDATLTENTRCAYPIEYI 357          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_ASHGO (Phosphoenolpyruvate carboxykinase [ATP] OS=Ashbya gossypii GN=PCK1 PE=3 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 5.472e-75
Identity = 135/216 (62.50%), Postives = 161/216 (74.54%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMP-KRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DP +RIK+RIV  RAYH+LFM NM IRPT EEL +FG PDFT++NAGQFP N +T  M+S T+++IN    EMVILGT+YAGEMKKG+F++M YLMP    +L+LHS  N G + DV                D +R LIGDDEHCWSD GV NIEGGCYAKCI LS EKEP+I+NAIK+G+VLEN+V+D  TR VDY D S+TENTR AYPIEYI
Sbjct:  122 DPRYRIKIRIVCCRAYHALFMTNMLIRPTEEELAEFGEPDFTVWNAGQFPANTHTEGMSSKTTVEINFRAMEMVILGTEYAGEMKKGIFTVMFYLMPINHNVLTLHSSANQGPNNDVTLFFGLSGTGKTTLSADQHRKLIGDDEHCWSDYGVFNIEGGCYAKCIGLSGEKEPEIFNAIKYGSVLENVVYDPVTRVVDYEDSSITENTRCAYPIEYI 337          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_YEAST (Phosphoenolpyruvate carboxykinase [ATP] OS=Saccharomyces cerevisiae GN=PCK1 PE=1 SV=2)

HSP 1 Score: 276.174 bits (705), Expect = 1.032e-73
Identity = 133/217 (61.29%), Postives = 166/217 (76.50%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMP-KRQILSLHSGCNMG-KDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DP++RIKVR+V ARAYH+LFM NM IRPT EEL  FG PDFT++NAGQFP N +T  M+S ++I+IN    EM+ILGT+YAGEMKKG+F++M YLMP    +L+LHS  N G ++GDV                D +R LIGDDEHCWSD+GV NIEGGCYAKCI+LS EKEP+I++AIKFG+VLEN+++DE +  VDY D S+TENTR AYPI+YI
Sbjct:  128 DPKYRIKVRVVCARAYHALFMTNMLIRPTEEELAHFGEPDFTVWNAGQFPANLHTQDMSSKSTIEINFKAMEMIILGTEYAGEMKKGIFTVMFYLMPVHHNVLTLHSSANQGIQNGDVTLFFGLSGTGKTTLSADPHRLLIGDDEHCWSDHGVFNIEGGCYAKCINLSAEKEPEIFDAIKFGSVLENVIYDEKSHVVDYDDSSITENTRCAYPIDYI 344          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_EMENI (Phosphoenolpyruvate carboxykinase [ATP] OS=Emericella nidulans GN=acuF PE=3 SV=2)

HSP 1 Score: 273.092 bits (697), Expect = 8.736e-73
Identity = 135/216 (62.50%), Postives = 162/216 (75.00%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMP-KRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D  +RI VR+V ARAYH+LFM NM IRP++EEL+ F  PD+ IYNAG FP NR+T  MTS+TS+ IN A KEMVILGT+YAGEMKKG+F+++ Y MP K  +L+LHS  N G++GDV                D  R LIGDDEHCW+D GV NIEGGCYAKCI LS EKEPDI+NAI+FG+VLEN+VFD  +R VDY D ++TENTR AYPIEYI
Sbjct:  138 DERYRISVRVVCARAYHALFMRNMLIRPSAEELKHFH-PDYVIYNAGSFPANRFTEGMTSATSVAINFAEKEMVILGTEYAGEMKKGVFTILFYEMPVKHNVLTLHSSANEGQNGDVTVFFGLSGTGKTTLSADPKRALIGDDEHCWTDRGVFNIEGGCYAKCIGLSAEKEPDIFNAIRFGSVLENVVFDPISRVVDYDDSTLTENTRCAYPIEYI 352          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_THETN (Phosphoenolpyruvate carboxykinase [ATP] OS=Thermoanaerobacter tengcongensis GN=pckA PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 4.209e-59
Identity = 105/215 (48.84%), Postives = 148/215 (68.84%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DP++R+ +R+++  AY SL    + IRPT +EL++F  P++T+  A +F        + S   I ++  +K ++I GTQY GE+KK +F+LM+YLMPK+ +LS+H   N+GKDGD A               D  R+LIGDDEH WS+ G+ N EGGCYAKCI+LSREKEP IW++I+FG +LEN+V+DE TRE+DY    +TENTRAAYPI++I
Sbjct:  108 DPQYRVSIRVITEYAYQSLMARQLFIRPTEKELQNF-VPEYTLIAAPRFKAIPEIDGVNSEAFIILSFTKKLIIIGGTQYGGEIKKSIFTLMNYLMPKKGVLSMHCSANIGKDGDTALFFGLSGTGKTTLSADPERFLIGDDEHGWSERGIFNFEGGCYAKCINLSREKEPQIWDSIRFGAILENVVYDEATRELDYTSDKITENTRAAYPIDFI 321          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_TRYBB (Phosphoenolpyruvate carboxykinase [ATP], glycosomal OS=Trypanosoma brucei brucei PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 3.016e-57
Identity = 106/215 (49.30%), Postives = 140/215 (65.12%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D  +R+KVR+ + R YH+LFM NM I PT EEL+ FG PD+ IYNAG+   +     +TS+TS+ +N   +E VILGT+YAGEMKKG+ ++M  LMP+   L +H+  N+GK GDV                D  R LIGDDEH W+D GV NIEGGCYAK I L+ E E DI+ A++FG V EN   D  T E+D+ D+S+ +NTR AYP+ +I
Sbjct:  101 DERYRLKVRVYTTRPYHALFMRNMLIVPTLEELQSFGEPDYVIYNAGEAKADPTVPGVTSTTSVALNFKTREQVILGTEYAGEMKKGILTVMFELMPRMGHLCMHASANVGKSGDVTVFFGLSGTGKTTLSADPRRNLIGDDEHVWTDRGVFNIEGGCYAKAIGLNPETEKDIYEAVRFGAVAENCTLDRRTHEIDFNDESICKNTRVAYPLMHI 315          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_TRYCR (Phosphoenolpyruvate carboxykinase [ATP], glycosomal OS=Trypanosoma cruzi GN=PEPCK PE=1 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 1.955e-56
Identity = 104/215 (48.37%), Postives = 142/215 (66.05%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D  +R+KVR+ + R YH+LFM +M I PT EEL  FG PD+ IYNAG+   +     +TS+T + +N   +E VILGT+YAGEMKKG+ ++M  LMP+   L +H+  N+GK GDV                D +R LIGDDEH W+D GV NIEGGCYAK I L+ + E DI++A++FG V EN V D+ T E+D+ D+S+ +NTR AYP+ +I
Sbjct:  101 DERYRLKVRVFTTRPYHALFMRDMLIVPTPEELATFGEPDYVIYNAGECKADPSIPGLTSTTCVALNFKTREQVILGTEYAGEMKKGILTVMFELMPQMNHLCMHASANVGKQGDVTVFFGLSGTGKTTLSADPHRNLIGDDEHVWTDRGVFNIEGGCYAKAIGLNPKTEKDIYDAVRFGAVAENCVLDKRTGEIDFYDESICKNTRVAYPLSHI 315          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_BACCN (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=pckA PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 1.955e-56
Identity = 107/215 (49.77%), Postives = 149/215 (69.30%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D  +R+ +++V+  A+H+LF+H + IRPT EEL +   P FTI +A  F  +       S   I ++  ++ ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D +R LIGDDEH WSDNGV NIEGGCYAKCI+LS EKEP I++AIKFG+VLEN++ D+ TR  DY D ++TENTRAAYPI+ I
Sbjct:  114 DRNYRLPIQVVNEYAWHNLFVHQLFIRPTEEELANHNAP-FTIVSAPNFKADPAVDGTNSEAFIIVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWSDNGVFNIEGGCYAKCINLSHEKEPQIFDAIKFGSVLENVIVDDKTRIADYSDTALTENTRAAYPIDAI 327          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_LYSSC (Phosphoenolpyruvate carboxykinase [ATP] OS=Lysinibacillus sphaericus (strain C3-41) GN=pckA PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 3.687e-55
Identity = 107/215 (49.77%), Postives = 145/215 (67.44%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D + ++ +++++  A+H+LF H + IRPT EEL      DFT+ +A  F  +       S T I ++L +K ++I GT+YAGEMKK +F +M+YL+P++ ILS+H   N+G+ GDVA               D +R LIGDDEH WSDNGV NIEGGCYAK I+LS EKEP+I+NAI+FG+VLEN+  D  TR  DY D S+TENTR AYPI+YI
Sbjct:  114 DKDSQLSIQVINEYAWHNLFAHQLFIRPTKEELASH-VADFTVISAPNFKADPAVDGTASETFIIVSLEKKIILIGGTEYAGEMKKSIFGIMNYLLPQQGILSMHCSANVGEAGDVALFFGLSGTGKTTLSADPDRKLIGDDEHGWSDNGVFNIEGGCYAKTINLSAEKEPEIYNAIRFGSVLENVAVDPETRICDYDDGSLTENTRVAYPIQYI 327          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_BREBN (Phosphoenolpyruvate carboxykinase [ATP] OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=pckA PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 8.214e-55
Identity = 107/215 (49.77%), Postives = 140/215 (65.12%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D  +R+ +R+V+  A+H+LF   + IRP+ EEL    + +FT+  A  F  N   H   S T I ++  +K ++I GT+YAGEMKK +FS+M+ L+P+R +L +H   N+GKDGDVA               D +R+LIGDDEH WSDNGV NIEGGCYAKC+ LS E EP IW AI+FGTVLEN+  +E TR  DY     TENTRAAYP+E I
Sbjct:  113 DTTYRLPIRVVNEFAWHNLFARQLFIRPSEEELAAHES-EFTVIYAPNFKANPAVHGTNSETFIVLSFEQKTVLIGGTEYAGEMKKSIFSVMNMLLPERNVLPMHCSANVGKDGDVALFFGLSGTGKTTLSADPDRFLIGDDEHGWSDNGVFNIEGGCYAKCVKLSEEGEPQIWKAIQFGTVLENVDVNEATRVADYDSTKYTENTRAAYPVEAI 326          
The following BLAST results are available for this feature:
BLAST of FC931551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_NEUCR4.190e-7565.74Phosphoenolpyruvate carboxykinase [ATP] OS=Neurosp... [more]
PCKA_ASHGO5.472e-7562.50Phosphoenolpyruvate carboxykinase [ATP] OS=Ashbya ... [more]
PCKA_YEAST1.032e-7361.29Phosphoenolpyruvate carboxykinase [ATP] OS=Sacchar... [more]
PCKA_EMENI8.736e-7362.50Phosphoenolpyruvate carboxykinase [ATP] OS=Emerice... [more]
PCKA_THETN4.209e-5948.84Phosphoenolpyruvate carboxykinase [ATP] OS=Thermoa... [more]
PCKA_TRYBB3.016e-5749.30Phosphoenolpyruvate carboxykinase [ATP], glycosoma... [more]
PCKA_TRYCR1.955e-5648.37Phosphoenolpyruvate carboxykinase [ATP], glycosoma... [more]
PCKA_BACCN1.955e-5649.77Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_LYSSC3.687e-5549.77Phosphoenolpyruvate carboxykinase [ATP] OS=Lysinib... [more]
PCKA_BREBN8.214e-5549.77Phosphoenolpyruvate carboxykinase [ATP] OS=Breviba... [more]

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Properties
Property NameValue
Genbank descriptionC34106D04EF PostHarvP1 Citrus clementina cDNA clone C34106D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931551 ID=FC931551; Name=FC931551; organism=Citrus clementina; type=EST; length=647bp
GGACCCAGAACACCGGATCAAAGTCCGAATTGTTTCTGCCAGAGCTTACC
ATTCCTTGTTCATGCACAACATGTGCATCCGACCCACGTCAGAAGAATTA
GAAGATTTTGGTACTCCGGACTTCACAATATACAATGCTGGGCAGTTTCC
TTGCAACCGTTACACCCACTATATGACTTCCTCTACTAGCATTGACATAA
ATCTTGCTAGGAAAGAAATGGTCATTCTTGGCACCCAGTATGCCGGAGAA
ATGAAGAAAGGTCTATTCAGCTTAATGCATTACCTAATGCCTAAACGTCA
AATCCTCTCCCTCCACTCTGGCTGCAATATGGGAAAAGATGGGGATGTTG
CCCTTTTCTTCGGACTATCCGGTACTGGGAAGACAACTCTGTCTACTGAT
CATAACCGGTACTTAATTGGAGATGATGAGCACTGCTGGAGTGATAATGG
AGTATCAAACATTGAAGGCGGGTGCTATGCCAAATGCATTGATCTTTCAA
GGGAGAAGGAGCCTGATATCTGGAATGCCATCAAATTCGGGACTGTGCTA
GAAAACATTGTGTTTGATGAGCATACACGAGAAGTGGACTACTTGGACAA
ATCTGTCACGGAGAACACTCGTGCCGCGTATCCCATAGAGTATATCC
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