FC931551

Overview
NameFC931551
Unique NameFC931551
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length647
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15351 contig Ccv1_Contig15351:1..647. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_BRASB (Phosphoenolpyruvate carboxykinase [ATP] OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=pckA PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 5.702e-48
Identity = 99/216 (45.83%), Postives = 134/216 (62.04%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DP  RIK R+ +  A+HSLF+  + IRP   EL+ F  P+ TI +   F  +   H + S   + I+ ARK ++I G+ YAGEMKK +F+ ++Y +P+R ++ +H   N+G  GD A               D NR LIGDDEH W  +GV N EGGCYAKCI LS+E EP I+ A  +FG VLEN+V DE +R  D+ D S TENTR+AYP++YI
Sbjct:  116 DPTFRIKTRVFTELAWHSLFIRTLLIRPEKIELDTF-VPELTIIDMPSFRADPKRHGVRSQNVVAIDFARKIVLIGGSYYAGEMKKSVFTTLNYYLPERGVMPMHCSANVGPKGDTAIFFGLSGTGKTTLSADPNRTLIGDDEHGWGPSGVFNFEGGCYAKCIKLSQEAEPQIFAASNRFGAVLENVVLDEDSRVPDFDDGSKTENTRSAYPLDYI 330          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_PSEF5 (Phosphoenolpyruvate carboxykinase [ATP] OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=pckA PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 9.726e-48
Identity = 96/215 (44.65%), Postives = 130/215 (60.47%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DP H + V++ +  A+H+LF   + I P  E+    G  ++ I NA  F C        S  ++ +N A K+++I G +YAGEMKK LFS+ ++L+P   +L +H   NMG++GDV                D +RYLIGDDEH W    V NIEGGCYAKCIDLS + EP IW AI+ G VLEN+V D  T++ DY D S+T+N+RAAYP E I
Sbjct:  102 DPAHYLPVKMTTETAWHNLFGRCLFINP--EQYNAGGKDEWQILNAPNFVCEPERDGTNSDGTVILNFAAKKVLIAGMRYAGEMKKALFSVQNFLLPAADVLPMHCAANMGEEGDVTLFFGLSGTGKTTLSADESRYLIGDDEHGWGVGVVFNIEGGCYAKCIDLSEKNEPVIWKAIQHGAVLENVVIDPVTKKADYADDSLTQNSRAAYPRELI 314          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_PSEMY (Phosphoenolpyruvate carboxykinase [ATP] OS=Pseudomonas mendocina (strain ymp) GN=pckA PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.270e-47
Identity = 94/212 (44.34%), Postives = 132/212 (62.26%), Query Frame = 2
Query:   11 HRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            H + V++ +A A+ +LF   + I P++      G  ++ I N   F C        S   + IN A K+++I G +YAGEMKK +FS+ ++L+P++ +L +H   N+G++GDV                D +RYLIGDDEH W +  V NIEGGCYAKCIDLS + EP IW AI+FGTVLEN+V DE  R  DY D S+T+N+RAAYP+EY+
Sbjct:  105 HYLPVKMTTATAWQNLFGRQLFINPSA--YNPAGKAEWEILNVANFECVPERDGTNSDGCVIINFAAKKVLIAGMRYAGEMKKAMFSVQNFLLPEKDVLPMHCAANIGEEGDVTLFFGLSGTGKTTLSADESRYLIGDDEHGWGEGVVFNIEGGCYAKCIDLSEKNEPVIWKAIQFGTVLENVVLDEQ-RTPDYSDDSLTQNSRAAYPLEYV 313          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_MARAV (Phosphoenolpyruvate carboxykinase [ATP] OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=pckA PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.659e-47
Identity = 90/215 (41.86%), Postives = 134/215 (62.33%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DPEH + V++ +  A+ +LF  N+ IRP S    D    ++ I NA  F C        S+  + IN A++++++ G  YAGEMKK +FS+ ++L+P++ +L +H   N+ + G+                 D +R+LIGDDEH W    V NIEGGCYAKCIDLS++ EP IW+AI+FG ++EN++ D  TRE DY D S+TEN+R AYP+E++
Sbjct:   98 DPEHYLPVKMTTETAWQNLFGRNLFIRPDSFNPAD--KQEWQILNAANFECVPERDGTNSNGCVIINFAKRKVLLAGMHYAGEMKKAMFSVQNFLLPEKDVLPMHCSANVSETGETCLFFGLSGTGKTTLSADPHRFLIGDDEHGWGPGTVFNIEGGCYAKCIDLSQKNEPIIWDAIRFGAIVENVMIDPETREPDYNDVSLTENSRCAYPLEHV 310          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_AMOA5 (Phosphoenolpyruvate carboxykinase [ATP] OS=Amoebophilus asiaticus (strain 5a2) GN=pckA PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.659e-47
Identity = 91/215 (42.33%), Postives = 140/215 (65.12%), Query Frame = 2
Query:    5 PEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKR-QILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            PE+++ +R V+ +++ +LF++N+ +RP  +EL  F +PDF I    +F  + +     ++    IN  ++ ++I GT +AGE+KK +F++++YL+P+  Q+L +H   N+G DG+ A               D NR LIGDDEH W D G+ N EGGCYAK I+L++E EP I++AIKFGT++EN+ F   TR +DY D S+TEN R AYP+EYI
Sbjct:  119 PEYKLNLRTVTTQSWTNLFVNNLFLRPIDKELTKF-SPDFLILQVPEFQADPHVDGTKNANFTIINFTKRVILIGGTGFAGEIKKAVFTVLNYLLPQEHQVLPMHCSANVGTDGNTAIYFGLSGTGKTTLSADPNRKLIGDDEHGWCDKGIFNFEGGCYAKTINLAKESEPQIFDAIKFGTIVENMRFFAGTRTIDYKDSSITENVRCAYPLEYI 332          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_SHELP (Phosphoenolpyruvate carboxykinase [ATP] OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=pckA PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.167e-47
Identity = 94/215 (43.72%), Postives = 132/215 (61.40%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DPEH   + + +  A+H LF  N+ I P  E+      P + I NA  F C+       S  ++ IN A +++++ G +YAGEMKK +FS+ ++L+P + +L +H   N+G +GD                 D  R+LIGDDEH W+  GV NIEGGCYAKCIDLS++ EP IW+AI+FGTVLEN+  DE  R  DY +  +TEN+RAAYP+E+I
Sbjct:  102 DPEHYQPIEVKTETAWHQLFARNLFIVP--EQFNVANKPVWQIMNAPGFECDPARDGTNSDATVIINFADRKVLLAGLKYAGEMKKSMFSVQNFLLPAKGVLPMHCSANVGSEGDTTLFFGLSGTGKTTLSADPKRFLIGDDEHGWAPGGVFNIEGGCYAKCIDLSQKNEPVIWDAIRFGTVLENVTLDEQ-RIPDYSNTELTENSRAAYPLEHI 313          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_RHOPT (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodopseudomonas palustris (strain TIE-1) GN=pckA PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.167e-47
Identity = 99/216 (45.83%), Postives = 133/216 (61.57%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNA-IKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DP  RIK R+ +  A+HSLF+  +  RP   ELE+F  P+ T+ +   F  +   H   S   + I+ ARK ++I GTQYAGEMKK +F+ ++Y +P++ +L +H   N+G +GD A               D NR LIGDDEH W  +GV N EGGCYAKCI LS E EP+I+ A  +FG VLEN+V  E  R+ D+ D S TENTR+AYP+E I
Sbjct:  117 DPTFRIKTRVYTELAWHSLFIRTLLRRPERAELENF-VPELTLIDLPSFRADPKRHGCRSENVVAIDFARKIVLIGGTQYAGEMKKSVFTTLNYYLPEKGVLPMHCSANVGPNGDTAIFFGLSGTGKTTLSADPNRTLIGDDEHGWGKDGVFNFEGGCYAKCIKLSAENEPEIYAASTRFGAVLENVVLGEIDRKPDFDDGSKTENTRSAYPLESI 331          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_RHOPA (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodopseudomonas palustris GN=pckA PE=1 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 2.167e-47
Identity = 99/216 (45.83%), Postives = 133/216 (61.57%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNA-IKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DP  RIK R+ +  A+HSLF+  +  RP   ELE+F  P+ T+ +   F  +   H   S   + I+ ARK ++I GTQYAGEMKK +F+ ++Y +P++ +L +H   N+G +GD A               D NR LIGDDEH W  +GV N EGGCYAKCI LS E EP+I+ A  +FG VLEN+V  E  R+ D+ D S TENTR+AYP+E I
Sbjct:  117 DPTFRIKTRVYTELAWHSLFIRTLLRRPERAELENF-VPELTLIDLPSFRADPKRHGCRSENVVAIDFARKIVLIGGTQYAGEMKKSVFTTLNYYLPEKGVLPMHCSANVGPNGDTAIFFGLSGTGKTTLSADPNRTLIGDDEHGWGKDGVFNFEGGCYAKCIKLSSENEPEIYAASTRFGAVLENVVLGELDRKPDFDDGSKTENTRSAYPLESI 331          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_BACTN (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacteroides thetaiotaomicron GN=pckA PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.167e-47
Identity = 101/213 (47.42%), Postives = 128/213 (60.09%), Query Frame = 2
Query:   14 RIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDG-DVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            R+K+R +   A+ + F+ NM IRPT+EEL +FG PDF I NA +     Y    + S T++  NL  K  VIL T Y GEMKKG+FS M+YL+P   + S+H   N  K+G   A               D  R LIGDDEH W D GV N EGGCYAK I+L +E EPDIWNAIK   +LEN   +    E+++ DKSVTENTR +YPI +I
Sbjct:  125 RLKLRFIMEVAWQAHFVTNMFIRPTAEELANFGEPDFVIMNASKAKVENYKELGLNSETAVVFNLTEKIQVILNTWYGGEMKKGMFSYMNYLLPLNGMASMHCSANTDKEGKSSAIFFGLSGTGKTTLSTDPKRLLIGDDEHGWDDEGVFNFEGGCYAKVINLDKESEPDIWNAIKRDALLENCTVNAE-GEINFADKSVTENTRVSYPIYHI 336          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_GEOUR (Phosphoenolpyruvate carboxykinase [ATP] OS=Geobacter uraniireducens (strain Rf4) GN=pckA PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 2.830e-47
Identity = 96/216 (44.44%), Postives = 137/216 (63.43%), Query Frame = 2
Query:    5 PEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKR-QILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            P+HR+ +R+++ +A+HSLF  NM ++ T+ ELE+   P FT+ +   F          S T I IN A++ ++I GT YAGE+KK +F++++YL+P   +++S+H   N G+ GDVA                 NR LIGDDEH W D+GV N EGGCYAK I+LS+E EP+I+    KFGT+LEN+  D  +R +D  D S TENTRA+YPI +I
Sbjct:  118 PKHRLPIRVIAEKAWHSLFARNMFVKATAAELENH-KPRFTVIDMPNFHAVPQIDGTNSETFIIINFAKRLVIIGGTSYAGEIKKSIFTVLNYLLPHHSKVMSMHCSANTGEKGDVAVFFGLSGTGKTTLSAAPNRSLIGDDEHGWDDDGVFNFEGGCYAKIINLSKESEPEIYETTRKFGTILENVAIDTISRRIDLNDDSFTENTRASYPITHI 332          
The following BLAST results are available for this feature:
BLAST of FC931551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_BRASB5.702e-4845.83Phosphoenolpyruvate carboxykinase [ATP] OS=Bradyrh... [more]
PCKA_PSEF59.726e-4844.65Phosphoenolpyruvate carboxykinase [ATP] OS=Pseudom... [more]
PCKA_PSEMY1.270e-4744.34Phosphoenolpyruvate carboxykinase [ATP] OS=Pseudom... [more]
PCKA_MARAV1.659e-4741.86Phosphoenolpyruvate carboxykinase [ATP] OS=Marinob... [more]
PCKA_AMOA51.659e-4742.33Phosphoenolpyruvate carboxykinase [ATP] OS=Amoebop... [more]
PCKA_SHELP2.167e-4743.72Phosphoenolpyruvate carboxykinase [ATP] OS=Shewane... [more]
PCKA_RHOPT2.167e-4745.83Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodops... [more]
PCKA_RHOPA2.167e-4745.83Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodops... [more]
PCKA_BACTN2.167e-4747.42Phosphoenolpyruvate carboxykinase [ATP] OS=Bactero... [more]
PCKA_GEOUR2.830e-4744.44Phosphoenolpyruvate carboxykinase [ATP] OS=Geobact... [more]

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Properties
Property NameValue
Genbank descriptionC34106D04EF PostHarvP1 Citrus clementina cDNA clone C34106D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931551 ID=FC931551; Name=FC931551; organism=Citrus clementina; type=EST; length=647bp
GGACCCAGAACACCGGATCAAAGTCCGAATTGTTTCTGCCAGAGCTTACC
ATTCCTTGTTCATGCACAACATGTGCATCCGACCCACGTCAGAAGAATTA
GAAGATTTTGGTACTCCGGACTTCACAATATACAATGCTGGGCAGTTTCC
TTGCAACCGTTACACCCACTATATGACTTCCTCTACTAGCATTGACATAA
ATCTTGCTAGGAAAGAAATGGTCATTCTTGGCACCCAGTATGCCGGAGAA
ATGAAGAAAGGTCTATTCAGCTTAATGCATTACCTAATGCCTAAACGTCA
AATCCTCTCCCTCCACTCTGGCTGCAATATGGGAAAAGATGGGGATGTTG
CCCTTTTCTTCGGACTATCCGGTACTGGGAAGACAACTCTGTCTACTGAT
CATAACCGGTACTTAATTGGAGATGATGAGCACTGCTGGAGTGATAATGG
AGTATCAAACATTGAAGGCGGGTGCTATGCCAAATGCATTGATCTTTCAA
GGGAGAAGGAGCCTGATATCTGGAATGCCATCAAATTCGGGACTGTGCTA
GAAAACATTGTGTTTGATGAGCATACACGAGAAGTGGACTACTTGGACAA
ATCTGTCACGGAGAACACTCGTGCCGCGTATCCCATAGAGTATATCC
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