FC931551

Overview
NameFC931551
Unique NameFC931551
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length647
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_ROSDO (Phosphoenolpyruvate carboxykinase [ATP] OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=pckA PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.129e-46
Identity = 96/218 (44.04%), Postives = 134/218 (61.47%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCN--MGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIW-NAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DP+H I VR+V+  A+H LF+ +M  RP  E+L+DF   DFT+ N   F  +   H   S T I +N  +K ++I GT+YAGE KK +F+L++YL+P++ ++ +H   N  +G   D A               D  R LIGDDEH WSD G  N EGGCYAK I L+ E EP+I+    KFGTV+EN+V+D  T+++D+ D S+T N R AYP+ YI
Sbjct:  116 DPKHAINVRMVTELAWHGLFIRHMLRRPDREDLDDF-IADFTVINCPSFQADPAKHNCRSETVIAMNFDKKLILIGGTEYAGENKKSVFTLLNYLLPEKGVMPMHCSANHAVGNPVDTAVFFGLSGTGKTTLSADPARTLIGDDEHGWSDTGTFNFEGGCYAKTISLNPEAEPEIYATTEKFGTVIENMVYDAETKDLDFEDDSLTANMRCAYPLHYI 332          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_RHOP5 (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodopseudomonas palustris (strain BisA53) GN=pckA PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.129e-46
Identity = 97/216 (44.91%), Postives = 129/216 (59.72%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DP  +IK R+ +  A+HSLF+  +  RP +  L  F  P+ TI +   F  +   H   S   + I+  RK ++I GTQYAGEMKK +F+ ++Y +P + +L +H   N+G DGD A               D NR LIGDDEH W  +GV N EGGCYAKCI LS E EP+I+ A  +FG +LEN V D  TR+ D+ D S TENTR+AYP+E I
Sbjct:  117 DPSFQIKTRVFTEMAWHSLFIRTLLRRPETAALASF-VPELTIIDLASFRADPKRHGCQSENVVAIDFTRKIVLIGGTQYAGEMKKSVFTTLNYYLPDKGVLPMHCSANVGPDGDTAIFFGLSGTGKTTLSADPNRTLIGDDEHGWGKDGVFNFEGGCYAKCIKLSAEAEPEIFAASNRFGAILENTVLDPITRKPDFNDGSKTENTRSAYPLESI 331          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_GEOMG (Phosphoenolpyruvate carboxykinase [ATP] OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=pckA PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.129e-46
Identity = 95/216 (43.98%), Postives = 135/216 (62.50%), Query Frame = 2
Query:    5 PEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPK-RQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            P+HR+ VR+++ RA+HSLF  NM +R T EEL  F  P FT+ +   F          + T I +N  ++ ++I GT YAGE+KK +F++++YL+P+ + +LS+H   N+G+  DVA               D  R LIGDDEH W ++GV N EGGCYAK I+LS E EP+I+    +FGT+LEN+  D  +R +D  D S TENTRA+YPI +I
Sbjct:  118 PDHRLPVRVITERAWHSLFARNMFVRATPEELVGF-KPGFTVIDLPAFHAIPSVDGTNTETFIIVNFEKRLIIIGGTSYAGEIKKSIFTILNYLLPQHKNVLSMHCSANVGEKDDVAVFFGLSGTGKTTLSADPRRRLIGDDEHGWDNSGVFNFEGGCYAKIINLSPEAEPEIYQTTRRFGTILENVAIDTVSRRIDLNDDSFTENTRASYPITHI 332          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_DINSH (Phosphoenolpyruvate carboxykinase [ATP] OS=Dinoroseobacter shibae (strain DFL 12) GN=pckA PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.129e-46
Identity = 97/218 (44.50%), Postives = 133/218 (61.01%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCN--MGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIK-FGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DP HR+ VR+++  A+H LF+ +M  RP   EL+ F T DFTI N   F  +   H   S T I +N  RK ++I GT+YAGE KK +F+L++Y++P++ I+ +H   N  +G   D A               D  R LIGDDEH WS+ G  N EGGCYAK I+LS E EP+I+   + FGTV+EN+VFD  T ++D+ D S+T N R AYP+ YI
Sbjct:  116 DPAHRLDVRVITELAWHGLFIRHMLRRPERGELDSF-TADFTIINCPSFKADPAKHDCRSDTVIALNFDRKLILIGGTEYAGENKKSVFTLLNYMLPEKGIMPMHCSANHAVGNPVDTAVFFGLSGTGKTTLSADPERVLIGDDEHGWSERGTFNFEGGCYAKTINLSAEAEPEIYATTEMFGTVIENMVFDPETLDLDFEDDSLTANMRCAYPLNYI 332          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_RHOPS (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodopseudomonas palustris (strain BisB5) GN=pckA PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.086e-46
Identity = 98/216 (45.37%), Postives = 132/216 (61.11%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNA-IKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DP  +IK R+ +  A+HSLF+  +  RP   +L  F  P+ T+ +   F  +   H   S   + I+ ARK ++I GTQYAGEMKK +F+ ++Y +P+R +L +H   N+G  GD A               D NR LIGDDEH W  +GV N EGGCYAKCI LS E EP+I+ A  +FG VLEN+V DE TR+ D+ + S TENTR+AYP+E I
Sbjct:  117 DPSFQIKTRVFTELAWHSLFIRTLLRRPDRADLAAF-VPELTLIDLPSFRADPKRHGCRSENVVAIDFARKIVLIGGTQYAGEMKKSVFTTLNYYLPERGVLPMHCSANVGPAGDTAIFFGLSGTGKTTLSADPNRTLIGDDEHGWGKDGVFNFEGGCYAKCIKLSPEAEPEIFAASSRFGAVLENVVLDEITRKPDFDNGSKTENTRSAYPLESI 331          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_PSEA7 (Phosphoenolpyruvate carboxykinase [ATP] OS=Pseudomonas aeruginosa (strain PA7) GN=pckA PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.086e-46
Identity = 91/210 (43.33%), Postives = 130/210 (61.90%), Query Frame = 2
Query:   17 IKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            + V++ +A A+ +LF   + I P  E+    G  ++ + N   F C        S   + +N A+K+++I G +YAGEMKK +FS+ ++L+P+R +L +H   N+G+ GDV                D +RYLIGDDEH W +  V N+EGGCYAKCIDLS + EP IW AIKFG VLEN+V DE  R  DY D S+T+N+RAAYP+E++
Sbjct:  107 LPVKMTTATAWQNLFGRCLFIEP--EQYNPAGKDEWQVLNVANFECVPERDGTNSDGCVILNFAQKKVLIAGMRYAGEMKKAMFSVQNFLLPERDVLPMHCAANIGEAGDVTLFFGLSGTGKTTLSADESRYLIGDDEHGWGEGVVFNVEGGCYAKCIDLSEKNEPVIWKAIKFGAVLENVVLDEE-RVPDYADDSLTQNSRAAYPLEHV 313          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_PARDP (Phosphoenolpyruvate carboxykinase [ATP] OS=Paracoccus denitrificans (strain Pd 1222) GN=pckA PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.086e-46
Identity = 96/218 (44.04%), Postives = 134/218 (61.47%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCN--MGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIW-NAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DP  R+ VR+V+  A+H LF+ N+  RP + EL  F  P+FTI N   F  +   H   S T I +N  +K ++I  T YAGE KK +F+L++Y++P++ ++ +H   N  +G   D A               D +R LIGDDEH WSDNG+ N EGGCYAK I+LS E EP+I+    KFGTV+EN+V+D  T E+D+ D S+T+N R AYP+E I
Sbjct:  116 DPALRLDVRVVTELAWHGLFIRNLLRRPEASELAGF-LPEFTIINCPSFKADPARHGCRSETVIALNFDKKLILIGNTAYAGENKKSVFTLLNYILPEKGVMPMHCSANHALGNPNDSAIFFGLSGTGKTTLSADPSRTLIGDDEHGWSDNGIFNFEGGCYAKTINLSAEAEPEIYATCFKFGTVIENMVYDPDTLELDFEDNSLTDNMRCAYPLEQI 332          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_ALISL (Phosphoenolpyruvate carboxykinase [ATP] OS=Aliivibrio salmonicida (strain LFI1238) GN=pckA PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.086e-46
Identity = 96/216 (44.44%), Postives = 132/216 (61.11%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRY-THYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            +P+ R+ VR+++  A+ + F+ NM IRPT EELE F  PDF + N  +     Y    + S   +  NL  +  +I GT Y GEMKKG+F++M+YL+P + I S+H   N+GK+GDVA               D  R LIGDDEH W D+G+ N EGGCYAK I LS+E EPDI+NAI+   +LEN+    +   +D+ D S TENTR +YPI +I
Sbjct:  128 NPDTRLSVRVITEVAWQAHFVKNMFIRPTDEELESF-EPDFVVMNGAKATNPNYEAQGLNSENFVAFNLTERVQIIGGTWYGGEMKKGMFAMMNYLLPLKGIASMHCSANVGKEGDVAVFFGLSGTGKTTLSTDPKRQLIGDDEHGWDDDGIFNFEGGCYAKTIRLSKEAEPDIFNAIRRDALLENVTV-RNDGSIDFDDGSKTENTRVSYPIYHI 341          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA1_SALRD (Phosphoenolpyruvate carboxykinase [ATP] 1 OS=Salinibacter ruber (strain DSM 13855) GN=pckA1 PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.086e-46
Identity = 89/216 (41.20%), Postives = 134/216 (62.04%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D  +R+ VRI++ +A+HSLF  NM +RP     + F  P FT+ +  +F  +       S  ++ +++A+  ++I GT Y GE+KK +FS+++Y++P+  +L +H   N G+DGD A               D +R LIGDDEH WSD GV N EGGCYAK ID++ E EP+I     +FGT+LEN++ D  TRE D+ D ++T+NTR +YP+ YI
Sbjct:  115 DESYRLPVRIITEKAWHSLFARNMFVRPDGPVPDSF-EPGFTVVDLCEFEADPERDGTHSEAAVFVDIAQNLILIGGTHYGGEIKKSIFSVLNYMLPEEGVLPMHCSANEGEDGDTAVFFGLSGTGKTTLSADASRTLIGDDEHGWSDRGVYNFEGGCYAKMIDITPESEPEIHGTTEEFGTILENVIVDPDTREPDFSDDTITQNTRGSYPLHYI 329          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_VIBF1 (Phosphoenolpyruvate carboxykinase [ATP] OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=pckA PE=3 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 5.337e-46
Identity = 96/216 (44.44%), Postives = 132/216 (61.11%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYT-HYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            +P+ R+ VRI++  A+ + F+ NM IRPT  ELE+F  PDF + N  +     Y  H + S   +  NL  +  +I GT Y GEMKKG+F++M+YL+P + I S+H   N+G+ GDVA               D  R LIGDDEH W D+G+ N EGGCYAK I LS+E EPDI+NAI+   +LEN+     +  +D+ D S TENTR +YPI +I
Sbjct:  125 NPDTRLNVRIITEVAWQAHFVKNMFIRPTEAELENF-EPDFVVMNGAKVTNPNYEKHGLNSENFVAFNLTERVQIIGGTWYGGEMKKGMFAMMNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRQLIGDDEHGWDDDGIFNFEGGCYAKTIRLSKEAEPDIYNAIRRDALLENVTVRSDS-SIDFNDGSKTENTRVSYPIYHI 338          
The following BLAST results are available for this feature:
BLAST of FC931551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_ROSDO3.129e-4644.04Phosphoenolpyruvate carboxykinase [ATP] OS=Roseoba... [more]
PCKA_RHOP53.129e-4644.91Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodops... [more]
PCKA_GEOMG3.129e-4643.98Phosphoenolpyruvate carboxykinase [ATP] OS=Geobact... [more]
PCKA_DINSH3.129e-4644.50Phosphoenolpyruvate carboxykinase [ATP] OS=Dinoros... [more]
PCKA_RHOPS4.086e-4645.37Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodops... [more]
PCKA_PSEA74.086e-4643.33Phosphoenolpyruvate carboxykinase [ATP] OS=Pseudom... [more]
PCKA_PARDP4.086e-4644.04Phosphoenolpyruvate carboxykinase [ATP] OS=Paracoc... [more]
PCKA_ALISL4.086e-4644.44Phosphoenolpyruvate carboxykinase [ATP] OS=Aliivib... [more]
PCKA1_SALRD4.086e-4641.20Phosphoenolpyruvate carboxykinase [ATP] 1 OS=Salin... [more]
PCKA_VIBF15.337e-4644.44Phosphoenolpyruvate carboxykinase [ATP] OS=Vibrio ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34106D04EF PostHarvP1 Citrus clementina cDNA clone C34106D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931551 ID=FC931551; Name=FC931551; organism=Citrus clementina; type=EST; length=647bp
GGACCCAGAACACCGGATCAAAGTCCGAATTGTTTCTGCCAGAGCTTACC
ATTCCTTGTTCATGCACAACATGTGCATCCGACCCACGTCAGAAGAATTA
GAAGATTTTGGTACTCCGGACTTCACAATATACAATGCTGGGCAGTTTCC
TTGCAACCGTTACACCCACTATATGACTTCCTCTACTAGCATTGACATAA
ATCTTGCTAGGAAAGAAATGGTCATTCTTGGCACCCAGTATGCCGGAGAA
ATGAAGAAAGGTCTATTCAGCTTAATGCATTACCTAATGCCTAAACGTCA
AATCCTCTCCCTCCACTCTGGCTGCAATATGGGAAAAGATGGGGATGTTG
CCCTTTTCTTCGGACTATCCGGTACTGGGAAGACAACTCTGTCTACTGAT
CATAACCGGTACTTAATTGGAGATGATGAGCACTGCTGGAGTGATAATGG
AGTATCAAACATTGAAGGCGGGTGCTATGCCAAATGCATTGATCTTTCAA
GGGAGAAGGAGCCTGATATCTGGAATGCCATCAAATTCGGGACTGTGCTA
GAAAACATTGTGTTTGATGAGCATACACGAGAAGTGGACTACTTGGACAA
ATCTGTCACGGAGAACACTCGTGCCGCGTATCCCATAGAGTATATCC
back to top