FC931551

Overview
NameFC931551
Unique NameFC931551
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length647
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_PORGI (Phosphoenolpyruvate carboxykinase [ATP] OS=Porphyromonas gingivalis GN=pckA PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 5.337e-46
Identity = 97/213 (45.54%), Postives = 128/213 (60.09%), Query Frame = 2
Query:   14 RIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDG-DVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            R+K+R +   A+ + F+ NM IRPT EEL ++G PDF +  A +     Y    + S T++  NL  K  VIL T Y GEMKKG+FS M+YL+P R + S+H   N   D  + A               D  R LIGDDEH W  +G+ N EGGCYAK I+LSRE EPDI+NAI+   +LEN+  D    ++D+ DKSVTENTR +YPI +I
Sbjct:  125 RLKIRFIMEVAWQAHFVKNMFIRPTEEELANYGEPDFVVMTASKAKVENYKELGLNSETAVVFNLTEKVQVILNTWYGGEMKKGMFSYMNYLLPLRGMASMHCSANTSMDEKETAIFFGLSGTGKTTLSTDPKRKLIGDDEHGWDKDGIFNFEGGCYAKVINLSRENEPDIYNAIRRNALLENVTVDA-AGKIDFGDKSVTENTRVSYPIYHI 336          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_PORG3 (Phosphoenolpyruvate carboxykinase [ATP] OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=pckA PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 5.337e-46
Identity = 97/213 (45.54%), Postives = 128/213 (60.09%), Query Frame = 2
Query:   14 RIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDG-DVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            R+K+R +   A+ + F+ NM IRPT EEL ++G PDF +  A +     Y    + S T++  NL  K  VIL T Y GEMKKG+FS M+YL+P R + S+H   N   D  + A               D  R LIGDDEH W  +G+ N EGGCYAK I+LSRE EPDI+NAI+   +LEN+  D    ++D+ DKSVTENTR +YPI +I
Sbjct:  125 RLKIRFIMEVAWQAHFVKNMFIRPTEEELANYGEPDFVVMTASKAKVENYKELGLNSETAVVFNLTEKVQVILNTWYGGEMKKGMFSYMNYLLPLRGMASMHCSANTSMDEKETAIFFGLSGTGKTTLSTDPKRKLIGDDEHGWDKDGIFNFEGGCYAKVINLSRENEPDIYNAIRRNALLENVTVDA-AGKIDFGDKSVTENTRVSYPIYHI 336          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_FUSNN (Phosphoenolpyruvate carboxykinase [ATP] OS=Fusobacterium nucleatum subsp. nucleatum GN=pckA PE=3 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 5.337e-46
Identity = 94/216 (43.52%), Postives = 130/216 (60.19%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGK-DGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            +PE+  + R+++  A  +LF+H + IR T EE  +    DFTI +A  F C      + S  +I IN  +K  +I  T+Y+GE+KK +FS+M+Y+MP   IL +H   NM     + A               D NR LIGDDEH W D G+ N EGGCYAKCI+L  E EP+I+ AIKFG+++EN+V D  TR++ Y D S+T NTR  YPI+YI
Sbjct:  108 NPEYTRRFRVINELASQNLFIHQLLIR-TDEEYNENNDIDFTIISAPNFHCVPEIDGVNSEAAIIINFEKKIAIICATKYSGEIKKSVFSIMNYIMPHENILPMHCSANMDPVTHETAIFFGLSGTGKTTLSADPNRKLIGDDEHGWCDKGIFNFEGGCYAKCINLKEESEPEIYRAIKFGSLVENVVVDPITRKIQYEDASITPNTRVGYPIDYI 322          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_VIBFM (Phosphoenolpyruvate carboxykinase [ATP] OS=Vibrio fischeri (strain MJ11) GN=pckA PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 6.970e-46
Identity = 96/216 (44.44%), Postives = 132/216 (61.11%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYT-HYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            +P+ R+ VRI++  A+ + F+ NM IRPT  ELE+F  PDF + N  +     Y  H + S   +  NL  +  +I GT Y GEMKKG+F++M+YL+P + I S+H   N+G+ GDVA               D  R LIGDDEH W D+G+ N EGGCYAK I LS+E EPDI+NAI+   +LEN+     +  +D+ D S TENTR +YPI +I
Sbjct:  128 NPDTRLNVRIITEVAWQAHFVKNMFIRPTEAELENF-EPDFVVMNGAKATNPNYEKHGLNSENFVAFNLTERVQIIGGTWYGGEMKKGMFAMMNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRQLIGDDEHGWDDDGIFNFEGGCYAKTIRLSKEAEPDIYNAIRRDALLENVTVRSDS-SIDFNDGSKTENTRVSYPIYHI 341          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_OLICO (Phosphoenolpyruvate carboxykinase [ATP] OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=pckA PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 6.970e-46
Identity = 96/216 (44.44%), Postives = 133/216 (61.57%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNA-IKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DP+ +IK R+ +  A+HSLF+  M  RP +  L DF  P+ TI +   F  +   H + S T + I+  RK ++I GT YAGEMKK +F+ +++ +P++ +L +H   N+G  GD A               D  R L+GDDEH W  +GV N EGGCYAK I LSRE EP I++A ++FG VLEN+V D  TR VD+ D S TENTR+AYP++ I
Sbjct:  117 DPKFQIKTRVYTELAWHSLFIRTMLRRPETAALADF-VPELTIIDLPSFRADPARHGVRSPTVVAIDFTRKIVLIGGTHYAGEMKKSVFTTLNFYLPEQGVLPMHCSANVGAKGDAAVFFGLSGTGKTTLSADPQRTLLGDDEHGWGPDGVFNFEGGCYAKTIRLSREAEPAIYDASLRFGAVLENVVVDSQTRAVDFDDGSKTENTRSAYPLDAI 331          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_NITHX (Phosphoenolpyruvate carboxykinase [ATP] OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=pckA PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 6.970e-46
Identity = 95/216 (43.98%), Postives = 129/216 (59.72%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIK-FGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DP  RI  R+ +  A+HSLF+  +  RP + EL  F  P+ T+ +   F  +   H + S   + I+  RK ++I G+ YAGEMKK +F+ ++Y +P   +L +H   N+G +GD                 D  R LIGDDEH WS  G+ N EGGCYAKCI LS+E EP+I+ A K FG VLEN+V DE TR  D+ D S TENTR+AYP+E+I
Sbjct:  117 DPNFRIPTRVFTELAWHSLFIRTLLRRPDTSELAGF-VPELTVIDLPSFRADPERHGVRSENVVAIDFVRKIILIGGSHYAGEMKKSIFTTLNYYLPDNGVLPMHCSANVGPEGDSTIFFGLSGTGKTTLSADPKRTLIGDDEHGWSKEGIFNFEGGCYAKCIKLSQEAEPEIYAASKRFGAVLENVVHDESTRVPDFDDGSKTENTRSAYPLEFI 331          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_AZOPC (Phosphoenolpyruvate carboxykinase [ATP] OS=Azobacteroides pseudotrichonymphae genomovar. CFP2 GN=pckA PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 9.103e-46
Identity = 96/213 (45.07%), Postives = 130/213 (61.03%), Query Frame = 2
Query:   14 RIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLD-KSVTENTRAAYPIEYI 646
            R+KVR +   A+ + F+ NM IRP++ EL+ +G PDF ++N  +    ++    + S   I  NL  KE +I GT Y GEMKKG+FS+ +Y +P + I S+H   N+G+ GDVA               D  RYLIGDDEH W DNG+ N EGGCYAK IDLS++ EPDIWNAI+   +LEN+   +    +DY    S TENTR +YPI +I
Sbjct:  122 RMKVRFIVEVAWQAHFVTNMFIRPSNYELDHYGDPDFVVFNGSKTTNPKWKEQGLNSEIYILFNLTEKEQIIGGTWYGGEMKKGMFSMQNYYLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSADPKRYLIGDDEHGWDDNGIFNYEGGCYAKVIDLSQKNEPDIWNAIRRDALLENVTV-KADGTLDYSKVASKTENTRVSYPIHHI 333          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_ANASU (Phosphoenolpyruvate carboxykinase [ATP] OS=Anaerobiospirillum succiniciproducens GN=pckA PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 9.103e-46
Identity = 98/213 (46.01%), Postives = 131/213 (61.50%), Query Frame = 2
Query:   14 RIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDG-DVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            R+K+R V   A+ + F+ NM IRPT EEL+ F  PDF + NA +     +    + S T++  NLA K  +IL T Y GEMKKG+FS+M++ +P + I ++H   N   +G + A               D  R LIGDDEH W D+GV N EGGCYAK I+LS+E EPDIW AIK   +LEN+  D + + VD+ DKSVTENTR +YPI +I
Sbjct:  125 RLKIRFVMEVAWQAHFVTNMFIRPTEEELKGF-EPDFVVLNASKAKVENFKELGLNSETAVVFNLAEKMQIILNTWYGGEMKKGMFSMMNFYLPLQGIAAMHCSANTDLEGKNTAIFFGLSGTGKTTLSTDPKRLLIGDDEHGWDDDGVFNFEGGCYAKVINLSKENEPDIWGAIKRNALLENVTVDANGK-VDFADKSVTENTRVSYPIFHI 335          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_METNO (Phosphoenolpyruvate carboxykinase [ATP] OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=pckA PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.189e-45
Identity = 94/216 (43.52%), Postives = 131/216 (60.65%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIW-NAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            +P HR++ R+ +  A+HSLF+ N+ IRP  +EL  +  PD TI +   F  +   H + S T I  +  R+ M+I GT YAGEMKK +F+ ++Y++P+  ++ +H   N+G  GD A               D  R L+GDDEH WS  G+ N EGGCYAK I LSRE EP+I+    +FGTV+EN+V D  TR  D+ D S TENTR AYP+ +I
Sbjct:  117 EPAHRVRARVFTEFAWHSLFIRNLLIRPERDELATY-EPDLTIIDLPSFKADPARHGVRSETMIACDFTRRIMLIGGTSYAGEMKKSVFTYLNYILPQAGVMPMHCSANVGGAGDSALFFGLSGTGKTTLSSDPARALLGDDEHGWSPKGIFNFEGGCYAKTIRLSREAEPEIYATTERFGTVMENVVIDPVTRLPDFDDASRTENTRCAYPLPFI 331          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_PSEAE (Phosphoenolpyruvate carboxykinase [ATP] OS=Pseudomonas aeruginosa GN=pckA PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.553e-45
Identity = 90/210 (42.86%), Postives = 130/210 (61.90%), Query Frame = 2
Query:   17 IKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            + V++ +A A+ +LF   + I P  E+    G  ++ + N   F C        S   + +N A+K+++I G +YAGEMKK +FS+ ++L+P+R +L +H   N+G+ GDV                D +RYLIGDDEH W +  V N+EGGCYAKCIDLS + EP IW AIKFG VLEN+V DE  R  +Y D S+T+N+RAAYP+E++
Sbjct:  107 LPVKMTTATAWQNLFGRCLFIEP--EQYNPAGKDEWQVLNVANFECVPERDGTNSDGCVILNFAQKKVLIAGMRYAGEMKKAMFSVQNFLLPERDVLPMHCAANIGEAGDVTLFFGLSGTGKTTLSADESRYLIGDDEHGWGEGVVFNVEGGCYAKCIDLSEKNEPVIWKAIKFGAVLENVVLDEE-RVPNYADDSLTQNSRAAYPLEHV 313          
The following BLAST results are available for this feature:
BLAST of FC931551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_PORGI5.337e-4645.54Phosphoenolpyruvate carboxykinase [ATP] OS=Porphyr... [more]
PCKA_PORG35.337e-4645.54Phosphoenolpyruvate carboxykinase [ATP] OS=Porphyr... [more]
PCKA_FUSNN5.337e-4643.52Phosphoenolpyruvate carboxykinase [ATP] OS=Fusobac... [more]
PCKA_VIBFM6.970e-4644.44Phosphoenolpyruvate carboxykinase [ATP] OS=Vibrio ... [more]
PCKA_OLICO6.970e-4644.44Phosphoenolpyruvate carboxykinase [ATP] OS=Oligotr... [more]
PCKA_NITHX6.970e-4643.98Phosphoenolpyruvate carboxykinase [ATP] OS=Nitroba... [more]
PCKA_AZOPC9.103e-4645.07Phosphoenolpyruvate carboxykinase [ATP] OS=Azobact... [more]
PCKA_ANASU9.103e-4646.01Phosphoenolpyruvate carboxykinase [ATP] OS=Anaerob... [more]
PCKA_METNO1.189e-4543.52Phosphoenolpyruvate carboxykinase [ATP] OS=Methylo... [more]
PCKA_PSEAE1.553e-4542.86Phosphoenolpyruvate carboxykinase [ATP] OS=Pseudom... [more]

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Properties
Property NameValue
Genbank descriptionC34106D04EF PostHarvP1 Citrus clementina cDNA clone C34106D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931551 ID=FC931551; Name=FC931551; organism=Citrus clementina; type=EST; length=647bp
GGACCCAGAACACCGGATCAAAGTCCGAATTGTTTCTGCCAGAGCTTACC
ATTCCTTGTTCATGCACAACATGTGCATCCGACCCACGTCAGAAGAATTA
GAAGATTTTGGTACTCCGGACTTCACAATATACAATGCTGGGCAGTTTCC
TTGCAACCGTTACACCCACTATATGACTTCCTCTACTAGCATTGACATAA
ATCTTGCTAGGAAAGAAATGGTCATTCTTGGCACCCAGTATGCCGGAGAA
ATGAAGAAAGGTCTATTCAGCTTAATGCATTACCTAATGCCTAAACGTCA
AATCCTCTCCCTCCACTCTGGCTGCAATATGGGAAAAGATGGGGATGTTG
CCCTTTTCTTCGGACTATCCGGTACTGGGAAGACAACTCTGTCTACTGAT
CATAACCGGTACTTAATTGGAGATGATGAGCACTGCTGGAGTGATAATGG
AGTATCAAACATTGAAGGCGGGTGCTATGCCAAATGCATTGATCTTTCAA
GGGAGAAGGAGCCTGATATCTGGAATGCCATCAAATTCGGGACTGTGCTA
GAAAACATTGTGTTTGATGAGCATACACGAGAAGTGGACTACTTGGACAA
ATCTGTCACGGAGAACACTCGTGCCGCGTATCCCATAGAGTATATCC
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