FC931551

Overview
NameFC931551
Unique NameFC931551
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length647
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15351 contig Ccv1_Contig15351:1..647. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_BACWK (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus weihenstephanensis (strain KBAB4) GN=pckA PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.390e-54
Identity = 105/215 (48.84%), Postives = 146/215 (67.91%), Query Frame = 2 
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D  +R+ +++V+  A+H+LF+H + IRP  EEL    + +FTI +A  F  +       S   I ++  ++ ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D NR LIGDDEH WSDNGV NIEGGCYAKC++LS EKEP I++AIKFG+VLEN+V D  TR  DY D ++TENTRAAYP+  I
Sbjct:  114 DRNYRLPIQVVNEYAWHNLFVHQLFIRPNEEELATHES-EFTIVSAPNFKADPAIDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSSNVGEEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAIKFGSVLENVVIDGQTRIADYNDTTLTENTRAAYPMHAI 327
[Close]
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_BACC2 (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus cereus (strain G9842) GN=pckA PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.121e-54
Identity = 103/215 (47.91%), Postives = 146/215 (67.91%), Query Frame = 2 
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D  +R+ +++++  A+H+LF+H + IRPT EEL    +  FTI +A  F  +       S   I ++  ++ ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D NR LIGDDEH WSDNGV NIEGGCYAKC++LS EKEP I++AIKFG+VLEN++ +  TR  DY D ++TENTRAAYP+  I
Sbjct:  114 DRNYRLPIQVINEYAWHNLFVHQLFIRPTEEELTTHES-GFTIVSAPNFKADPAVDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAIKFGSVLENVIINNQTRIADYNDTTLTENTRAAYPMHAI 327
[Close]
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_BACHK (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus thuringiensis subsp. konkukian GN=pckA PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.077e-54
Identity = 102/215 (47.44%), Postives = 147/215 (68.37%), Query Frame = 2 
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D  +R+ +++++  A+H+LF+H + IRPT EEL    + +FTI +A  F  +       S   I ++  ++ ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D NR LIGDDEH WSDNGV NIEGGCYAKC++LS EKEP I++AI FG+VLEN++ ++ TR  DY D ++TENTRAAYP+  I
Sbjct:  114 DRNYRLPIQVINEYAWHNLFVHQLFIRPTEEELTTHES-EFTIVSAPNFKADPAVDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAITFGSVLENVIINDQTRIADYNDTTLTENTRAAYPMHAI 327
[Close]
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_BACCZ (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus cereus (strain ZK / E33L) GN=pckA PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.077e-54
Identity = 102/215 (47.44%), Postives = 147/215 (68.37%), Query Frame = 2 
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D  +R+ +++++  A+H+LF+H + IRPT EEL    + +FTI +A  F  +       S   I ++  ++ ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D NR LIGDDEH WSDNGV NIEGGCYAKC++LS EKEP I++AI FG+VLEN++ ++ TR  DY D ++TENTRAAYP+  I
Sbjct:  114 DRNYRLPIQVINEYAWHNLFVHQLFIRPTEEELTTHES-EFTIVSAPNFKADPAVDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAITFGSVLENVIINDQTRIADYNDTTLTENTRAAYPMHAI 327
[Close]
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_BACCR (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=pckA PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.077e-54
Identity = 102/215 (47.44%), Postives = 147/215 (68.37%), Query Frame = 2 
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D  +R+ +++++  A+H+LF+H + IRPT EEL    + +FTI +A  F  +       S   I ++  ++ ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D NR LIGDDEH WSDNGV NIEGGCYAKC++LS EKEP I++AI FG+VLEN++ ++ TR  DY D ++TENTRAAYP+  I
Sbjct:  114 DRNYRLPIQVINEYAWHNLFVHQLFIRPTEEELTTHES-EFTIVSAPNFKADPAVDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAITFGSVLENVIINDQTRIADYNDTTLTENTRAAYPMHAI 327
[Close]
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_BACCQ (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus cereus (strain Q1) GN=pckA PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.077e-54
Identity = 102/215 (47.44%), Postives = 147/215 (68.37%), Query Frame = 2 
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D  +R+ +++++  A+H+LF+H + IRPT EEL    + +FTI +A  F  +       S   I ++  ++ ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D NR LIGDDEH WSDNGV NIEGGCYAKC++LS EKEP I++AI FG+VLEN++ ++ TR  DY D ++TENTRAAYP+  I
Sbjct:  114 DRNYRLPIQVINEYAWHNLFVHQLFIRPTEEELTTHES-EFTIVSAPNFKADPAVDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAITFGSVLENVIINDQTRIADYNDTTLTENTRAAYPMHAI 327
[Close]
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_BACC7 (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus cereus (strain AH187) GN=pckA PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.077e-54
Identity = 102/215 (47.44%), Postives = 147/215 (68.37%), Query Frame = 2 
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D  +R+ +++++  A+H+LF+H + IRPT EEL    + +FTI +A  F  +       S   I ++  ++ ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D NR LIGDDEH WSDNGV NIEGGCYAKC++LS EKEP I++AI FG+VLEN++ ++ TR  DY D ++TENTRAAYP+  I
Sbjct:  114 DRNYRLPIQVINEYAWHNLFVHQLFIRPTEEELTTHES-EFTIVSAPNFKADPAVDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAITFGSVLENVIINDQTRIADYNDTTLTENTRAAYPMHAI 327
[Close]
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_BACC3 (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus cereus (strain 03BB102) GN=pckA PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.077e-54
Identity = 102/215 (47.44%), Postives = 147/215 (68.37%), Query Frame = 2 
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D  +R+ +++++  A+H+LF+H + IRPT EEL    + +FTI +A  F  +       S   I ++  ++ ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D NR LIGDDEH WSDNGV NIEGGCYAKC++LS EKEP I++AI FG+VLEN++ ++ TR  DY D ++TENTRAAYP+  I
Sbjct:  114 DRNYRLPIQVINEYAWHNLFVHQLFIRPTEEELTTHES-EFTIVSAPNFKADPAVDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAITFGSVLENVIINDQTRIADYNDTTLTENTRAAYPMHAI 327
[Close]
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_BACC1 (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus cereus (strain ATCC 10987) GN=pckA PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.077e-54
Identity = 102/215 (47.44%), Postives = 147/215 (68.37%), Query Frame = 2 
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D  +R+ +++++  A+H+LF+H + IRPT EEL    + +FTI +A  F  +       S   I ++  ++ ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D NR LIGDDEH WSDNGV NIEGGCYAKC++LS EKEP I++AI FG+VLEN++ ++ TR  DY D ++TENTRAAYP+  I
Sbjct:  114 DRNYRLPIQVINEYAWHNLFVHQLFIRPTEEELTTHES-EFTIVSAPNFKADPAVDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAITFGSVLENVIINDQTRIADYNDTTLTENTRAAYPMHAI 327
[Close]
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_BACC0 (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus cereus (strain AH820) GN=pckA PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.077e-54
Identity = 102/215 (47.44%), Postives = 147/215 (68.37%), Query Frame = 2 
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D  +R+ +++++  A+H+LF+H + IRPT EEL    + +FTI +A  F  +       S   I ++  ++ ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D NR LIGDDEH WSDNGV NIEGGCYAKC++LS EKEP I++AI FG+VLEN++ ++ TR  DY D ++TENTRAAYP+  I
Sbjct:  114 DRNYRLPIQVINEYAWHNLFVHQLFIRPTEEELTTHES-EFTIVSAPNFKADPAVDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAITFGSVLENVIINDQTRIADYNDTTLTENTRAAYPMHAI 327
The following BLAST results are available for this feature:
BLAST of FC931551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_BACWK2.390e-5448.84Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACC23.121e-5447.91Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACHK4.077e-5447.44Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACCZ4.077e-5447.44Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACCR4.077e-5447.44Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACCQ4.077e-5447.44Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACC74.077e-5447.44Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACC34.077e-5447.44Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACC14.077e-5447.44Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACC04.077e-5447.44Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]

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Properties
Property NameValue
Genbank descriptionC34106D04EF PostHarvP1 Citrus clementina cDNA clone C34106D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931551 ID=FC931551; Name=FC931551; organism=Citrus clementina; type=EST; length=647bp
GGACCCAGAACACCGGATCAAAGTCCGAATTGTTTCTGCCAGAGCTTACC
ATTCCTTGTTCATGCACAACATGTGCATCCGACCCACGTCAGAAGAATTA
GAAGATTTTGGTACTCCGGACTTCACAATATACAATGCTGGGCAGTTTCC
TTGCAACCGTTACACCCACTATATGACTTCCTCTACTAGCATTGACATAA
ATCTTGCTAGGAAAGAAATGGTCATTCTTGGCACCCAGTATGCCGGAGAA
ATGAAGAAAGGTCTATTCAGCTTAATGCATTACCTAATGCCTAAACGTCA
AATCCTCTCCCTCCACTCTGGCTGCAATATGGGAAAAGATGGGGATGTTG
CCCTTTTCTTCGGACTATCCGGTACTGGGAAGACAACTCTGTCTACTGAT
CATAACCGGTACTTAATTGGAGATGATGAGCACTGCTGGAGTGATAATGG
AGTATCAAACATTGAAGGCGGGTGCTATGCCAAATGCATTGATCTTTCAA
GGGAGAAGGAGCCTGATATCTGGAATGCCATCAAATTCGGGACTGTGCTA
GAAAACATTGTGTTTGATGAGCATACACGAGAAGTGGACTACTTGGACAA
ATCTGTCACGGAGAACACTCGTGCCGCGTATCCCATAGAGTATATCC
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